RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 DICER1Q9UPY3 1922 aaKnown RBP28.28■■■□□ 2.12
UBFD1-210ENST00000571064 GNAT3A8MTJ3 354 aa28.28■■■□□ 2.12
UBFD1-210ENST00000571064 DDNO94850 711 aaPredicted RBP28.28■■■□□ 2.12
UBFD1-210ENST00000571064 TMPOP42166 694 aaKnown RBP28.28■■■□□ 2.12
UBFD1-210ENST00000571064 BRIP1Q9BX63 1249 aa28.28■■■□□ 2.12
UBFD1-210ENST00000571064 FER1L6Q2WGJ9 1857 aa28.27■■■□□ 2.12
UBFD1-210ENST00000571064 APAF1O14727 1248 aa28.27■■■□□ 2.12
UBFD1-210ENST00000571064 FOXN1O15353 648 aa28.27■■■□□ 2.12
UBFD1-210ENST00000571064 PDE6BP35913 854 aa28.27■■■□□ 2.12
UBFD1-210ENST00000571064 PRR5LQ6MZQ0 368 aa28.27■■■□□ 2.12
UBFD1-210ENST00000571064 IL17REQ8NFR9 667 aa28.27■■■□□ 2.12
UBFD1-210ENST00000571064 RRP7AQ9Y3A4 280 aaKnown RBP28.27■■■□□ 2.12
UBFD1-210ENST00000571064 COL11A2P13942 1736 aaPredicted RBP28.26■■■□□ 2.12
UBFD1-210ENST00000571064 STARD3NLO95772 234 aa28.25■■■□□ 2.11
UBFD1-210ENST00000571064 TAOK3Q9H2K8 898 aa28.25■■■□□ 2.11
UBFD1-210ENST00000571064 PDZRN3Q9UPQ7 1066 aa28.25■■■□□ 2.11
UBFD1-210ENST00000571064 A0A087WZG4 1122 aa28.24■■■□□ 2.11
UBFD1-210ENST00000571064 TBC1D2BQ9UPU7 963 aa28.24■■■□□ 2.11
UBFD1-210ENST00000571064 LTBP3Q9NS15 1303 aa28.23■■■□□ 2.11
UBFD1-210ENST00000571064 RIPK4P57078 832 aa28.23■■■□□ 2.11
UBFD1-210ENST00000571064 DCTN1Q14203 1278 aa28.23■■■□□ 2.11
UBFD1-210ENST00000571064 ZNF330Q9Y3S2 320 aaPredicted RBP28.23■■■□□ 2.11
UBFD1-210ENST00000571064 UBR2Q8IWV8 1755 aa28.23■■■□□ 2.11
UBFD1-210ENST00000571064 CNTNAP1P78357 1384 aa28.23■■■□□ 2.11
UBFD1-210ENST00000571064 NEUROD2Q15784 382 aa28.22■■■□□ 2.11
UBFD1-210ENST00000571064 HTATSF1O43719 755 aaKnown RBP28.21■■■□□ 2.11
UBFD1-210ENST00000571064 MCM10Q7L590 875 aa28.21■■■□□ 2.11
UBFD1-210ENST00000571064 TTC5Q8N0Z6 440 aa28.21■■■□□ 2.11
UBFD1-210ENST00000571064 CEMIPQ8WUJ3 1361 aa28.21■■■□□ 2.11
UBFD1-210ENST00000571064 TRIM35Q9UPQ4 493 aa28.2■■■□□ 2.1
UBFD1-210ENST00000571064 SLX4Q8IY92 1834 aa28.2■■■□□ 2.1
UBFD1-210ENST00000571064 PASKQ96RG2 1323 aa28.19■■■□□ 2.1
UBFD1-210ENST00000571064 ZNF496Q96IT1 587 aaPredicted RBP28.19■■■□□ 2.1
UBFD1-210ENST00000571064 PRDM10Q9NQV6 1147 aa28.19■■■□□ 2.1
UBFD1-210ENST00000571064 SCN7AQ01118 1682 aa28.19■■■□□ 2.1
UBFD1-210ENST00000571064 PRPF40BQ6NWY9 871 aaKnown RBP28.18■■■□□ 2.1
UBFD1-210ENST00000571064 CNKSR1Q969H4 720 aa28.18■■■□□ 2.1
UBFD1-210ENST00000571064 SIPA1L3O60292 1781 aaPredicted RBP28.17■■■□□ 2.1
UBFD1-210ENST00000571064 LDHDQ86WU2 507 aa28.17■■■□□ 2.1
UBFD1-210ENST00000571064 CNBD1Q8NA66 436 aa28.17■■■□□ 2.1
UBFD1-210ENST00000571064 RTF1Q92541 710 aaKnown RBP28.17■■■□□ 2.1
UBFD1-210ENST00000571064 THUMPD2Q9BTF0 503 aaKnown RBP28.17■■■□□ 2.1
UBFD1-210ENST00000571064 HEG1Q9ULI3 1381 aa28.16■■■□□ 2.1
UBFD1-210ENST00000571064 NPHP1O15259 732 aa28.16■■■□□ 2.1
UBFD1-210ENST00000571064 SRGNP10124 158 aa28.16■■■□□ 2.1
UBFD1-210ENST00000571064 VEGFBP49765 207 aa28.16■■■□□ 2.1
UBFD1-210ENST00000571064 STYK1Q6J9G0 422 aa28.16■■■□□ 2.1
UBFD1-210ENST00000571064 SETDB2Q96T68 719 aa28.16■■■□□ 2.1
UBFD1-210ENST00000571064 CACNA1SQ13698 1873 aa28.16■■■□□ 2.1
UBFD1-210ENST00000571064 IQCA1LA6NCM1 817 aa28.15■■■□□ 2.1
UBFD1-210ENST00000571064 TAF1DQ9H5J8 278 aaPredicted RBP28.15■■■□□ 2.1
UBFD1-210ENST00000571064 IL6STP40189 918 aaPredicted RBP28.14■■■□□ 2.1
UBFD1-210ENST00000571064 CTCFP49711 727 aaPredicted RBP28.14■■■□□ 2.1
UBFD1-210ENST00000571064 ZNF790Q6PG37 636 aa28.14■■■□□ 2.1
UBFD1-210ENST00000571064 AIDAQ96BJ3 306 aa28.14■■■□□ 2.1
UBFD1-210ENST00000571064 CAMTA2O94983 1202 aa28.13■■■□□ 2.09
UBFD1-210ENST00000571064 A1BGP04217 495 aa28.13■■■□□ 2.09
UBFD1-210ENST00000571064 MASTLQ96GX5 879 aa28.13■■■□□ 2.09
UBFD1-210ENST00000571064 L3MBTL3Q96JM7 780 aaPredicted RBP28.13■■■□□ 2.09
UBFD1-210ENST00000571064 TEX13AQ9BXU3 409 aaPredicted RBP28.13■■■□□ 2.09
UBFD1-210ENST00000571064 TMEM88BA6NKF7 163 aa28.12■■■□□ 2.09
UBFD1-210ENST00000571064 ITGBL1O95965 494 aaPredicted RBP28.12■■■□□ 2.09
UBFD1-210ENST00000571064 ST5P78524 1137 aa28.12■■■□□ 2.09
UBFD1-210ENST00000571064 SOGA3Q5TF21 947 aa28.12■■■□□ 2.09
UBFD1-210ENST00000571064 LMOD3Q0VAK6 560 aa28.11■■■□□ 2.09
UBFD1-210ENST00000571064 EAPPQ56P03 285 aaPredicted RBP28.11■■■□□ 2.09
UBFD1-210ENST00000571064 LBX1P52954 281 aa28.1■■■□□ 2.09
UBFD1-210ENST00000571064 TEFQ10587 303 aa28.1■■■□□ 2.09
UBFD1-210ENST00000571064 C7orf43Q8WVR3 580 aa28.1■■■□□ 2.09
UBFD1-210ENST00000571064 SCN4AP35499 1836 aa28.1■■■□□ 2.09
UBFD1-210ENST00000571064 WBP1LQ9NX94 342 aa28.09■■■□□ 2.09
UBFD1-210ENST00000571064 SALL2Q9Y467 1007 aaPredicted RBP28.09■■■□□ 2.09
UBFD1-210ENST00000571064 ARFGEF2Q9Y6D5 1785 aa28.09■■■□□ 2.09
UBFD1-210ENST00000571064 NCBP3Q53F19 620 aaKnown RBP28.08■■■□□ 2.09
UBFD1-210ENST00000571064 NPM2Q86SE8 214 aaKnown RBP28.08■■■□□ 2.09
UBFD1-210ENST00000571064 ZNF541Q9H0D2 1346 aa28.08■■■□□ 2.09
UBFD1-210ENST00000571064 CCDC27Q2M243 656 aa28.07■■■□□ 2.08
UBFD1-210ENST00000571064 CCDC93Q567U6 631 aa28.07■■■□□ 2.08
UBFD1-210ENST00000571064 CLEC11AQ9Y240 323 aa28.07■■■□□ 2.08
UBFD1-210ENST00000571064 DZIP3Q86Y13 1208 aaKnown RBP28.06■■■□□ 2.08
UBFD1-210ENST00000571064 FMNL2Q96PY5 1086 aa28.06■■■□□ 2.08
UBFD1-210ENST00000571064 ZNF277Q9NRM2 450 aaPredicted RBP28.06■■■□□ 2.08
UBFD1-210ENST00000571064 PIP4K2AP48426 406 aaPredicted RBP28.05■■■□□ 2.08
UBFD1-210ENST00000571064 OLFM4Q6UX06 510 aa28.05■■■□□ 2.08
UBFD1-210ENST00000571064 WWC1Q8IX03 1113 aa28.05■■■□□ 2.08
UBFD1-210ENST00000571064 HACL1Q9UJ83 578 aa28.05■■■□□ 2.08
UBFD1-210ENST00000571064 KCNQ3O43525 872 aa28.04■■■□□ 2.08
UBFD1-210ENST00000571064 TAF7Q15545 349 aaPredicted RBP28.04■■■□□ 2.08
UBFD1-210ENST00000571064 MIS18AQ9NYP9 233 aa28.04■■■□□ 2.08
UBFD1-210ENST00000571064 EPHX2P34913 555 aa28.03■■■□□ 2.08
UBFD1-210ENST00000571064 FKBP4Q02790 459 aaKnown RBP eCLIP28.03■■■□□ 2.08
UBFD1-210ENST00000571064 NBPF5PQ86XG9 351 aaPredicted RBP28.03■■■□□ 2.08
UBFD1-210ENST00000571064 BCORQ6W2J9 1755 aa28.03■■■□□ 2.08
UBFD1-210ENST00000571064 BTBD11A6QL63 1104 aa28.02■■■□□ 2.08
UBFD1-210ENST00000571064 MAP1SQ66K74 1059 aaPredicted RBP28.02■■■□□ 2.08
UBFD1-210ENST00000571064 RASSF10A6NK89 507 aa28.01■■■□□ 2.07
UBFD1-210ENST00000571064 HSPA8P11142 646 aaKnown RBP28.01■■■□□ 2.07
UBFD1-210ENST00000571064 NPR1P16066 1061 aa28.01■■■□□ 2.07
UBFD1-210ENST00000571064 DEFB115Q30KQ5 88 aa28.01■■■□□ 2.07
UBFD1-210ENST00000571064 CNTROBQ8N137 903 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms