RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 TYRO3Q06418 890 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 ERCC4Q92889 916 aaPredicted RBP11.79□□□□□ -0.52
USP43-203ENST00000570827 KIF1BPQ96EK5 621 aa11.79□□□□□ -0.52
USP43-203ENST00000570827 A0A087WWV3 80 aa11.78□□□□□ -0.52
USP43-203ENST00000570827 LTKP29376 864 aa11.78□□□□□ -0.52
USP43-203ENST00000570827 ISM2Q6H9L7 571 aa11.78□□□□□ -0.52
USP43-203ENST00000570827 TMX1Q9H3N1 280 aa11.78□□□□□ -0.52
USP43-203ENST00000570827 ME1P48163 572 aa11.78□□□□□ -0.52
USP43-203ENST00000570827 CREBRFQ8IUR6 639 aa11.78□□□□□ -0.52
USP43-203ENST00000570827 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
USP43-203ENST00000570827 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
USP43-203ENST00000570827 CHL1O00533 1208 aa11.77□□□□□ -0.52
USP43-203ENST00000570827 LIG1P18858 919 aa11.77□□□□□ -0.52
USP43-203ENST00000570827 ANAPC15P60006 121 aa11.77□□□□□ -0.52
USP43-203ENST00000570827 PTPN14Q15678 1187 aa11.77□□□□□ -0.52
USP43-203ENST00000570827 CLEC17AQ6ZS10 378 aa11.77□□□□□ -0.52
USP43-203ENST00000570827 KAT6BQ8WYB5 2073 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 YTHDC2Q9H6S0 1430 aaKnown RBP11.77□□□□□ -0.53
USP43-203ENST00000570827 KINO60870 393 aaKnown RBP11.77□□□□□ -0.53
USP43-203ENST00000570827 LARGE1O95461 756 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 PDCP20941 246 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 SLC39A6Q13433 755 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 FAM200AQ8TCP9 573 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 IQSEC2Q5JU85 1478 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 NEO1Q92859 1461 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 BIN1O00499 593 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
USP43-203ENST00000570827 EYA1Q99502 592 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 NDUFB9Q9Y6M9 179 aa11.77□□□□□ -0.53
USP43-203ENST00000570827 METP08581 1390 aa11.76□□□□□ -0.53
USP43-203ENST00000570827 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
USP43-203ENST00000570827 NEUROD6Q96NK8 337 aa11.76□□□□□ -0.53
USP43-203ENST00000570827 KCNQ3O43525 872 aa11.76□□□□□ -0.53
USP43-203ENST00000570827 PSMA5P28066 241 aa11.76□□□□□ -0.53
USP43-203ENST00000570827 ZNF530Q6P9A1 599 aaPredicted RBP11.76□□□□□ -0.53
USP43-203ENST00000570827 RUFY3Q7L099 469 aa11.76□□□□□ -0.53
USP43-203ENST00000570827 MAP3K19Q56UN5 1328 aa11.76□□□□□ -0.53
USP43-203ENST00000570827 TTC21BQ7Z4L5 1316 aa11.76□□□□□ -0.53
USP43-203ENST00000570827 LMTK2Q8IWU2 1503 aa11.76□□□□□ -0.53
USP43-203ENST00000570827 VGLL3A8MV65 326 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 POLR3GO15318 223 aaPredicted RBP11.75□□□□□ -0.53
USP43-203ENST00000570827 GLRX3O76003 335 aaKnown RBP11.75□□□□□ -0.53
USP43-203ENST00000570827 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
USP43-203ENST00000570827 HSP90AB4PQ58FF6 505 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 IL25Q9H293 177 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 ZNF853P0CG23 659 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 ADCK5Q3MIX3 580 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 CEP135Q66GS9 1140 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 KLHDC4Q8TBB5 520 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 ZFP91Q96JP5 570 aaPredicted RBP11.75□□□□□ -0.53
USP43-203ENST00000570827 RBM8AQ9Y5S9 174 aaKnown RBP11.75□□□□□ -0.53
USP43-203ENST00000570827 QRICH2Q9H0J4 1663 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
USP43-203ENST00000570827 SKIDA1Q1XH10 827 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 CDC37L1Q7L3B6 337 aa11.75□□□□□ -0.53
USP43-203ENST00000570827 GNAT3A8MTJ3 354 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 PTH1RQ03431 593 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 RAB11FIP4Q86YS3 637 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 MNS1Q8NEH6 495 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 DIP2CQ9Y2E4 1556 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 CUL4AQ13619 759 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 CHRNA2Q15822 529 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 C1orf141Q5JVX7 400 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 ZSCAN31Q96LW9 406 aaPredicted RBP11.74□□□□□ -0.53
USP43-203ENST00000570827 PPP6R1Q9UPN7 881 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 USP16Q9Y5T5 823 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 ADGRB1O14514 1584 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 SKILP12757 684 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 HSPA4P34932 840 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 CBX8Q9HC52 389 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 GLI2P10070 1586 aa11.74□□□□□ -0.53
USP43-203ENST00000570827 USP32Q8NFA0 1604 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 SGSM2O43147 1006 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 KCNA6P17658 529 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 DMTNQ08495 405 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 PDILTQ8N807 584 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 CHMP4CQ96CF2 233 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 FAM227BQ96M60 508 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 IFT172Q9UG01 1749 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 PRR36Q9H6K5 1346 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 LARP1Q6PKG0 1096 aaKnown RBP11.73□□□□□ -0.53
USP43-203ENST00000570827 TTC6Q86TZ1 520 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 SIGLEC1Q9BZZ2 1709 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 CAMSAP1Q5T5Y3 1602 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 SHPRHQ149N8 1683 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 CWF19L2Q2TBE0 894 aaKnown RBP11.73□□□□□ -0.53
USP43-203ENST00000570827 HSP90AA4PQ58FG1 418 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 ZNF710Q8N1W2 664 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 SCAND2PQ9GZW5 306 aaPredicted RBP11.73□□□□□ -0.53
USP43-203ENST00000570827 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
USP43-203ENST00000570827 TULP4Q9NRJ4 1543 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 BRPF1P55201 1214 aaPredicted RBP11.72□□□□□ -0.53
USP43-203ENST00000570827 TPM4P67936 248 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 ME3Q16798 604 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 ECHDC1Q9NTX5 307 aa11.72□□□□□ -0.53
USP43-203ENST00000570827 TTLL5Q6EMB2 1281 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms