RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 GPATCH11Q8N954 259 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 ERO1AQ96HE7 468 aa12.43□□□□□ -0.42
MMP2-208ENST00000570308 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
MMP2-208ENST00000570308 ANKLE2Q86XL3 938 aa12.42□□□□□ -0.42
MMP2-208ENST00000570308 DRC7Q8IY82 874 aa12.42□□□□□ -0.42
MMP2-208ENST00000570308 NEK11Q8NG66 645 aa12.42□□□□□ -0.42
MMP2-208ENST00000570308 GTF3C6Q969F1 213 aa12.42□□□□□ -0.42
MMP2-208ENST00000570308 ZNF215Q9UL58 517 aaPredicted RBP12.42□□□□□ -0.42
MMP2-208ENST00000570308 PATL2C9JE40 543 aaKnown RBP12.42□□□□□ -0.42
MMP2-208ENST00000570308 FOXD4L6Q3SYB3 417 aaPredicted RBP12.42□□□□□ -0.42
MMP2-208ENST00000570308 FOXD4L3Q6VB84 417 aaPredicted RBP12.42□□□□□ -0.42
MMP2-208ENST00000570308 GDPD2Q9HCC8 539 aa12.42□□□□□ -0.42
MMP2-208ENST00000570308 TOMM22Q9NS69 142 aa12.42□□□□□ -0.42
MMP2-208ENST00000570308 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.42□□□□□ -0.42
MMP2-208ENST00000570308 V9GYY5 206 aaPredicted RBP12.42□□□□□ -0.42
MMP2-208ENST00000570308 ELF2Q15723 593 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 NOM1Q5C9Z4 860 aaKnown RBP12.41□□□□□ -0.42
MMP2-208ENST00000570308 CEP83Q9Y592 693 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 TRIM66O15016 1216 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
MMP2-208ENST00000570308 GYS2P54840 703 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 NFE2L2Q16236 605 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 INTS3Q68E01 1043 aaKnown RBP12.41□□□□□ -0.42
MMP2-208ENST00000570308 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.41□□□□□ -0.42
MMP2-208ENST00000570308 CCDC191Q8NCU4 936 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 SBNO1A3KN83 1393 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 RTL1A6NKG5 1358 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 ZNF446Q9NWS9 450 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 NOB1Q9ULX3 412 aaKnown RBP12.41□□□□□ -0.42
MMP2-208ENST00000570308 KDRP35968 1356 aa12.41□□□□□ -0.42
MMP2-208ENST00000570308 LRRFIP2Q9Y608 721 aaKnown RBP12.4□□□□□ -0.42
MMP2-208ENST00000570308 TRPM3Q9HCF6 1732 aaPredicted RBP12.4□□□□□ -0.42
MMP2-208ENST00000570308 CAMTA1Q9Y6Y1 1673 aa12.4□□□□□ -0.42
MMP2-208ENST00000570308 CCDC172P0C7W6 258 aa12.4□□□□□ -0.42
MMP2-208ENST00000570308 ZNF853P0CG23 659 aa12.4□□□□□ -0.42
MMP2-208ENST00000570308 CCDC186Q7Z3E2 898 aa12.4□□□□□ -0.42
MMP2-208ENST00000570308 JRKLQ9Y4A0 524 aa12.4□□□□□ -0.42
MMP2-208ENST00000570308 SMARCA5O60264 1052 aaPredicted RBP12.39□□□□□ -0.43
MMP2-208ENST00000570308 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 NFAT5O94916 1531 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 LMTK3Q96Q04 1460 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 A0A1B0GUL7 405 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 AP5Z1O43299 807 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 MCM2P49736 904 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 ZSCAN26Q16670 478 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 ALDH1L2Q3SY69 923 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 TPRNQ4KMQ1 711 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 SSH1Q8WYL5 1049 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 SLIT3O75094 1523 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 NCKAP5LQ9HCH0 1330 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 TMX3Q96JJ7 454 aa12.39□□□□□ -0.43
MMP2-208ENST00000570308 CT47A1Q5JQC4 288 aaPredicted RBP12.38□□□□□ -0.43
MMP2-208ENST00000570308 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
MMP2-208ENST00000570308 FLT4P35916 1363 aa12.38□□□□□ -0.43
MMP2-208ENST00000570308 POLR3GO15318 223 aaPredicted RBP12.38□□□□□ -0.43
MMP2-208ENST00000570308 SLU7O95391 586 aaKnown RBP12.38□□□□□ -0.43
MMP2-208ENST00000570308 LRMPQ12912 555 aa12.38□□□□□ -0.43
MMP2-208ENST00000570308 KCNA6P17658 529 aa12.37□□□□□ -0.43
MMP2-208ENST00000570308 EP400NLQ6ZTU2 488 aa12.37□□□□□ -0.43
MMP2-208ENST00000570308 DRC1Q96MC2 740 aa12.37□□□□□ -0.43
MMP2-208ENST00000570308 WDR33Q9C0J8 1336 aaKnown RBP12.37□□□□□ -0.43
MMP2-208ENST00000570308 PTPN14Q15678 1187 aa12.37□□□□□ -0.43
MMP2-208ENST00000570308 TTC31Q49AM3 519 aaPredicted RBP12.37□□□□□ -0.43
MMP2-208ENST00000570308 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
MMP2-208ENST00000570308 DCCP43146 1447 aa12.37□□□□□ -0.43
MMP2-208ENST00000570308 CCDC171Q6TFL3 1326 aa12.37□□□□□ -0.43
MMP2-208ENST00000570308 NPHP1O15259 732 aa12.37□□□□□ -0.43
MMP2-208ENST00000570308 GIMAP6Q6P9H5 292 aa12.37□□□□□ -0.43
MMP2-208ENST00000570308 RAD50Q92878 1312 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 NEK4P51957 841 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 UBE2HP62256 183 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 EXOSC9Q06265 439 aaKnown RBP12.36□□□□□ -0.43
MMP2-208ENST00000570308 SRLQ86TD4 932 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 FHOD1Q9Y613 1164 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 NCAPD2Q15021 1401 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 LTN1O94822 1766 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 CCDC192P0DO97 292 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 GSPT1P15170 499 aaKnown RBP12.36□□□□□ -0.43
MMP2-208ENST00000570308 ZSCAN25Q6NSZ9 544 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
MMP2-208ENST00000570308 LCMT1Q9UIC8 334 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 RRP15Q9Y3B9 282 aaKnown RBP12.36□□□□□ -0.43
MMP2-208ENST00000570308 PTPRCP08575 1304 aa12.36□□□□□ -0.43
MMP2-208ENST00000570308 PNMA6AP0CW24 399 aaPredicted RBP12.35□□□□□ -0.43
MMP2-208ENST00000570308 PLPPR3Q6T4P5 718 aa12.35□□□□□ -0.43
MMP2-208ENST00000570308 TMEM87AQ8NBN3 555 aa12.35□□□□□ -0.43
MMP2-208ENST00000570308 TSR2Q969E8 191 aaKnown RBP12.35□□□□□ -0.43
MMP2-208ENST00000570308 INTS4Q96HW7 963 aaKnown RBP12.35□□□□□ -0.43
MMP2-208ENST00000570308 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
MMP2-208ENST00000570308 CCDC91Q7Z6B0 441 aa12.35□□□□□ -0.43
MMP2-208ENST00000570308 AK7Q96M32 723 aa12.35□□□□□ -0.43
MMP2-208ENST00000570308 ARGLU1Q9NWB6 273 aaPredicted RBP12.35□□□□□ -0.43
MMP2-208ENST00000570308 ABCC6O95255 1503 aa12.35□□□□□ -0.43
MMP2-208ENST00000570308 GOLGA5Q8TBA6 731 aa12.35□□□□□ -0.43
MMP2-208ENST00000570308 FUCA2Q9BTY2 467 aa12.35□□□□□ -0.43
MMP2-208ENST00000570308 H2AFXP16104 143 aaPredicted RBP12.34□□□□□ -0.43
MMP2-208ENST00000570308 PLA2G4AP47712 749 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms