RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 TEFQ10587 303 aa15.2■□□□□ 0.02
SPG7-216ENST00000567138 CNTNAP1P78357 1384 aa15.19■□□□□ 0.02
SPG7-216ENST00000567138 ADAMTSL1Q8N6G6 1762 aa15.19■□□□□ 0.02
SPG7-216ENST00000567138 FOXN1O15353 648 aa15.19■□□□□ 0.02
SPG7-216ENST00000567138 CAMTA2O94983 1202 aa15.19■□□□□ 0.02
SPG7-216ENST00000567138 A1BGP04217 495 aa15.19■□□□□ 0.02
SPG7-216ENST00000567138 IL6STP40189 918 aaPredicted RBP15.19■□□□□ 0.02
SPG7-216ENST00000567138 ST5P78524 1137 aa15.19■□□□□ 0.02
SPG7-216ENST00000567138 ZNF790Q6PG37 636 aa15.19■□□□□ 0.02
SPG7-216ENST00000567138 CNKSR1Q969H4 720 aa15.19■□□□□ 0.02
SPG7-216ENST00000567138 SETDB2Q96T68 719 aa15.19■□□□□ 0.02
SPG7-216ENST00000567138 CC2D1BQ5T0F9 858 aaKnown RBP15.18■□□□□ 0.02
SPG7-216ENST00000567138 STYK1Q6J9G0 422 aa15.18■□□□□ 0.02
SPG7-216ENST00000567138 IL17REQ8NFR9 667 aa15.18■□□□□ 0.02
SPG7-216ENST00000567138 SRGNP10124 158 aa15.17■□□□□ 0.02
SPG7-216ENST00000567138 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
SPG7-216ENST00000567138 MASTLQ96GX5 879 aa15.17■□□□□ 0.02
SPG7-216ENST00000567138 FMNL2Q96PY5 1086 aa15.17■□□□□ 0.02
SPG7-216ENST00000567138 TEX13AQ9BXU3 409 aaPredicted RBP15.17■□□□□ 0.02
SPG7-216ENST00000567138 KIF7Q2M1P5 1343 aa15.17■□□□□ 0.02
SPG7-216ENST00000567138 GNAT3A8MTJ3 354 aa15.16■□□□□ 0.02
SPG7-216ENST00000567138 U2SURPO15042 1029 aaKnown RBP15.16■□□□□ 0.02
SPG7-216ENST00000567138 KCNQ3O43525 872 aa15.16■□□□□ 0.02
SPG7-216ENST00000567138 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
SPG7-216ENST00000567138 LDHDQ86WU2 507 aa15.16■□□□□ 0.02
SPG7-216ENST00000567138 DZIP3Q86Y13 1208 aaKnown RBP15.16■□□□□ 0.02
SPG7-216ENST00000567138 PASKQ96RG2 1323 aa15.16■□□□□ 0.02
SPG7-216ENST00000567138 LAMB4A4D0S4 1761 aa15.15■□□□□ 0.02
SPG7-216ENST00000567138 IQCA1LA6NCM1 817 aa15.15■□□□□ 0.02
SPG7-216ENST00000567138 CNGB1Q14028 1251 aaPredicted RBP15.15■□□□□ 0.02
SPG7-216ENST00000567138 EAPPQ56P03 285 aaPredicted RBP15.15■□□□□ 0.02
SPG7-216ENST00000567138 SOGA3Q5TF21 947 aa15.15■□□□□ 0.02
SPG7-216ENST00000567138 GAS2L2Q8NHY3 880 aa15.15■□□□□ 0.02
SPG7-216ENST00000567138 TAF1DQ9H5J8 278 aaPredicted RBP15.15■□□□□ 0.02
SPG7-216ENST00000567138 ZNF541Q9H0D2 1346 aa15.15■□□□□ 0.02
SPG7-216ENST00000567138 CCDC93Q567U6 631 aa15.14■□□□□ 0.01
SPG7-216ENST00000567138 L3MBTL3Q96JM7 780 aaPredicted RBP15.14■□□□□ 0.01
SPG7-216ENST00000567138 VEGFBP49765 207 aa15.13■□□□□ 0.01
SPG7-216ENST00000567138 NUP98P52948 1817 aa15.13■□□□□ 0.01
SPG7-216ENST00000567138 OLFM4Q6UX06 510 aa15.13■□□□□ 0.01
SPG7-216ENST00000567138 NBPF5PQ86XG9 351 aaPredicted RBP15.13■□□□□ 0.01
SPG7-216ENST00000567138 CEMIPQ8WUJ3 1361 aa15.13■□□□□ 0.01
SPG7-216ENST00000567138 AIDAQ96BJ3 306 aa15.13■□□□□ 0.01
SPG7-216ENST00000567138 ZNF277Q9NRM2 450 aaPredicted RBP15.13■□□□□ 0.01
SPG7-216ENST00000567138 TRPM7Q96QT4 1865 aa15.13■□□□□ 0.01
SPG7-216ENST00000567138 PRAMEF22A3QJZ6 481 aa15.12■□□□□ 0.01
SPG7-216ENST00000567138 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
SPG7-216ENST00000567138 C7orf43Q8WVR3 580 aa15.12■□□□□ 0.01
SPG7-216ENST00000567138 PRDM10Q9NQV6 1147 aa15.12■□□□□ 0.01
SPG7-216ENST00000567138 USP16Q9Y5T5 823 aa15.12■□□□□ 0.01
SPG7-216ENST00000567138 TMEM88BA6NKF7 163 aa15.11■□□□□ 0.01
SPG7-216ENST00000567138 BTBD11A6QL63 1104 aa15.11■□□□□ 0.01
SPG7-216ENST00000567138 CTCFP49711 727 aaPredicted RBP15.11■□□□□ 0.01
SPG7-216ENST00000567138 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
SPG7-216ENST00000567138 LTBP1Q14766 1721 aa15.11■□□□□ 0.01
SPG7-216ENST00000567138 RNF123Q5XPI4 1314 aa15.11■□□□□ 0.01
SPG7-216ENST00000567138 FAM177BA6PVY3 158 aa15.11■□□□□ 0.01
SPG7-216ENST00000567138 PER1O15534 1290 aaPredicted RBP15.11■□□□□ 0.01
SPG7-216ENST00000567138 ITGBL1O95965 494 aaPredicted RBP15.11■□□□□ 0.01
SPG7-216ENST00000567138 NPR1P16066 1061 aa15.11■□□□□ 0.01
SPG7-216ENST00000567138 HACL1Q9UJ83 578 aa15.11■□□□□ 0.01
SPG7-216ENST00000567138 THSD7BQ9C0I4 1608 aa15.1■□□□□ 0.01
SPG7-216ENST00000567138 DLG5Q8TDM6 1919 aa15.1■□□□□ 0.01
SPG7-216ENST00000567138 LBX1P52954 281 aa15.1■□□□□ 0.01
SPG7-216ENST00000567138 ZNF652Q9Y2D9 606 aa15.1■□□□□ 0.01
SPG7-216ENST00000567138 PRKAR2BP31323 418 aa15.09■□□□□ 0.01
SPG7-216ENST00000567138 EPHX2P34913 555 aa15.09■□□□□ 0.01
SPG7-216ENST00000567138 MAP1SQ66K74 1059 aaPredicted RBP15.09■□□□□ 0.01
SPG7-216ENST00000567138 PHACTR3Q96KR7 559 aa15.09■□□□□ 0.01
SPG7-216ENST00000567138 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
SPG7-216ENST00000567138 COL4A5P29400 1685 aa15.08■□□□□ 0.01
SPG7-216ENST00000567138 CLEC4GQ6UXB4 293 aa15.08■□□□□ 0
SPG7-216ENST00000567138 WBP1LQ9NX94 342 aa15.08■□□□□ 0
SPG7-216ENST00000567138 NIP7Q9Y221 180 aaKnown RBP eCLIP15.08■□□□□ 0
SPG7-216ENST00000567138 IARSP41252 1262 aaKnown RBP15.07■□□□□ 0
SPG7-216ENST00000567138 RSPH6AQ9H0K4 717 aa15.07■□□□□ 0
SPG7-216ENST00000567138 KDM3BQ7LBC6 1761 aa15.07■□□□□ 0
SPG7-216ENST00000567138 KLRG2A4D1S0 409 aaPredicted RBP15.06■□□□□ 0
SPG7-216ENST00000567138 NBPF26B4DH59 902 aa15.06■□□□□ 0
SPG7-216ENST00000567138 HSPA8P11142 646 aaKnown RBP15.06■□□□□ 0
SPG7-216ENST00000567138 NBPF10Q6P3W6 841 aaKnown RBP15.06■□□□□ 0
SPG7-216ENST00000567138 TPTE2Q6XPS3 522 aa15.06■□□□□ 0
SPG7-216ENST00000567138 MCM10Q7L590 875 aa15.06■□□□□ 0
SPG7-216ENST00000567138 RTKN2Q8IZC4 609 aa15.06■□□□□ 0
SPG7-216ENST00000567138 CNTROBQ8N137 903 aa15.06■□□□□ 0
SPG7-216ENST00000567138 SYNE4Q8N205 404 aa15.06■□□□□ 0
SPG7-216ENST00000567138 NBPF15Q8N660 670 aa15.06■□□□□ 0
SPG7-216ENST00000567138 SNED1Q8TER0 1413 aa15.06■□□□□ 0
SPG7-216ENST00000567138 ABCC12Q96J65 1359 aa15.06■□□□□ 0
SPG7-216ENST00000567138 NPC1L1Q9UHC9 1359 aa15.06■□□□□ 0
SPG7-216ENST00000567138 RASSF10A6NK89 507 aa15.05■□□□□ -0
SPG7-216ENST00000567138 FZD9O00144 591 aa15.05■□□□□ -0
SPG7-216ENST00000567138 SNRPA1P09661 255 aaKnown RBP15.05■□□□□ -0
SPG7-216ENST00000567138 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
SPG7-216ENST00000567138 DEFB115Q30KQ5 88 aa15.05■□□□□ -0
SPG7-216ENST00000567138 ABT1Q9ULW3 272 aaKnown RBP15.05■□□□□ -0
SPG7-216ENST00000567138 WDR33Q9C0J8 1336 aaKnown RBP15.04■□□□□ -0
SPG7-216ENST00000567138 HLFQ16534 295 aa15.04■□□□□ -0
SPG7-216ENST00000567138 PNMA8AQ86V59 439 aaPredicted RBP15.04■□□□□ -0
SPG7-216ENST00000567138 GTF2E1P29083 439 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms