RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 ERC1Q8IUD2 1116 aa10.69□□□□□ -0.7
LINC01541-201ENST00000566582 UNC5CLQ8IV45 518 aa10.69□□□□□ -0.7
LINC01541-201ENST00000566582 CARD10Q9BWT7 1032 aa10.69□□□□□ -0.7
LINC01541-201ENST00000566582 MRC1P22897 1456 aa10.69□□□□□ -0.7
LINC01541-201ENST00000566582 NEURL1BA8MQ27 555 aa10.69□□□□□ -0.7
LINC01541-201ENST00000566582 ST18O60284 1047 aa10.69□□□□□ -0.7
LINC01541-201ENST00000566582 PTCD1O75127 700 aaKnown RBP10.69□□□□□ -0.7
LINC01541-201ENST00000566582 MCCP23508 829 aa10.69□□□□□ -0.7
LINC01541-201ENST00000566582 METTL22Q9BUU2 404 aaPredicted RBP10.69□□□□□ -0.7
LINC01541-201ENST00000566582 IFIT2P09913 472 aaKnown RBP10.68□□□□□ -0.7
LINC01541-201ENST00000566582 G3BP1Q13283 466 aaKnown RBP eCLIP10.68□□□□□ -0.7
LINC01541-201ENST00000566582 GCKRQ14397 625 aa10.68□□□□□ -0.7
LINC01541-201ENST00000566582 CNTROBQ8N137 903 aa10.68□□□□□ -0.7
LINC01541-201ENST00000566582 PARP4Q9UKK3 1724 aaKnown RBP10.68□□□□□ -0.7
LINC01541-201ENST00000566582 ERVV-2B6SEH9 535 aa10.68□□□□□ -0.7
LINC01541-201ENST00000566582 GPATCH3Q96I76 525 aa10.68□□□□□ -0.7
LINC01541-201ENST00000566582 SIL1Q9H173 461 aa10.68□□□□□ -0.7
LINC01541-201ENST00000566582 UTYO14607 1347 aa10.68□□□□□ -0.7
LINC01541-201ENST00000566582 PI4K2BQ8TCG2 481 aa10.67□□□□□ -0.7
LINC01541-201ENST00000566582 ATP5J2-PTCD1G3V325 749 aa10.67□□□□□ -0.7
LINC01541-201ENST00000566582 JARID2Q92833 1246 aaPredicted RBP10.67□□□□□ -0.7
LINC01541-201ENST00000566582 BTG4Q9NY30 223 aa10.67□□□□□ -0.7
LINC01541-201ENST00000566582 GLRX3O76003 335 aaKnown RBP10.66□□□□□ -0.7
LINC01541-201ENST00000566582 MCM4P33991 863 aa10.66□□□□□ -0.7
LINC01541-201ENST00000566582 AACSQ86V21 672 aa10.66□□□□□ -0.7
LINC01541-201ENST00000566582 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
LINC01541-201ENST00000566582 TTC41PQ6P2S7 1318 aa10.66□□□□□ -0.7
LINC01541-201ENST00000566582 UBE3BQ7Z3V4 1068 aa10.66□□□□□ -0.7
LINC01541-201ENST00000566582 PLBD2Q8NHP8 589 aa10.66□□□□□ -0.7
LINC01541-201ENST00000566582 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
LINC01541-201ENST00000566582 A0A087WZG4 1122 aa10.65□□□□□ -0.7
LINC01541-201ENST00000566582 NEK4P51957 841 aa10.65□□□□□ -0.7
LINC01541-201ENST00000566582 LRP10Q7Z4F1 713 aa10.65□□□□□ -0.7
LINC01541-201ENST00000566582 KLHDC4Q8TBB5 520 aa10.65□□□□□ -0.7
LINC01541-201ENST00000566582 ECHDC1Q9NTX5 307 aa10.65□□□□□ -0.7
LINC01541-201ENST00000566582 TMOD3Q9NYL9 352 aa10.65□□□□□ -0.7
LINC01541-201ENST00000566582 A1BGP04217 495 aa10.65□□□□□ -0.71
LINC01541-201ENST00000566582 NKX1-1Q15270 411 aaPredicted RBP10.65□□□□□ -0.71
LINC01541-201ENST00000566582 TAOK2Q9UL54 1235 aa10.65□□□□□ -0.71
LINC01541-201ENST00000566582 ZNF330Q9Y3S2 320 aaPredicted RBP10.65□□□□□ -0.71
LINC01541-201ENST00000566582 ABCA3Q99758 1704 aa10.64□□□□□ -0.71
LINC01541-201ENST00000566582 DDIT3P35638 169 aa10.64□□□□□ -0.71
LINC01541-201ENST00000566582 CWC27Q6UX04 472 aaKnown RBP10.64□□□□□ -0.71
LINC01541-201ENST00000566582 KIAA1211Q6ZU35 1233 aa10.64□□□□□ -0.71
LINC01541-201ENST00000566582 EPHA10Q5JZY3 1008 aa10.64□□□□□ -0.71
LINC01541-201ENST00000566582 CCDC8Q9H0W5 538 aaPredicted RBP10.64□□□□□ -0.71
LINC01541-201ENST00000566582 DIAPH3Q9NSV4 1193 aa10.64□□□□□ -0.71
LINC01541-201ENST00000566582 ERBB4Q15303 1308 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 TUBGCP6Q96RT7 1819 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 NBPF26B4DH59 902 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 SASH1O94885 1247 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 NBPF14Q5TI25 921 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
LINC01541-201ENST00000566582 NBPF15Q8N660 670 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 TNPO1Q92973 898 aaKnown RBP10.63□□□□□ -0.71
LINC01541-201ENST00000566582 GBP4Q96PP9 640 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 CHMP3Q9Y3E7 222 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 NHSL1Q5SYE7 1610 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 AK9Q5TCS8 1911 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 DDX11L8A8MPP1 907 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 TTLL7Q6ZT98 887 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 ZBTB3Q9H5J0 574 aa10.63□□□□□ -0.71
LINC01541-201ENST00000566582 USP42Q9H9J4 1324 aaKnown RBP10.62□□□□□ -0.71
LINC01541-201ENST00000566582 ANAPC15P60006 121 aa10.62□□□□□ -0.71
LINC01541-201ENST00000566582 RAB3GAP1Q15042 981 aa10.62□□□□□ -0.71
LINC01541-201ENST00000566582 RUFY2Q8WXA3 655 aa10.62□□□□□ -0.71
LINC01541-201ENST00000566582 EAF2Q96CJ1 260 aaPredicted RBP10.62□□□□□ -0.71
LINC01541-201ENST00000566582 IL25Q9H293 177 aa10.62□□□□□ -0.71
LINC01541-201ENST00000566582 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
LINC01541-201ENST00000566582 AFDNP55196 1824 aaKnown RBP10.62□□□□□ -0.71
LINC01541-201ENST00000566582 SGSM2O43147 1006 aa10.62□□□□□ -0.71
LINC01541-201ENST00000566582 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
LINC01541-201ENST00000566582 LAMB4A4D0S4 1761 aa10.61□□□□□ -0.71
LINC01541-201ENST00000566582 EVI5LQ96CN4 794 aa10.61□□□□□ -0.71
LINC01541-201ENST00000566582 CWC25Q9NXE8 425 aaPredicted RBP10.61□□□□□ -0.71
LINC01541-201ENST00000566582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.61□□□□□ -0.71
LINC01541-201ENST00000566582 ARFGEF2Q9Y6D5 1785 aa10.61□□□□□ -0.71
LINC01541-201ENST00000566582 LMBR1LQ6UX01 489 aa10.6□□□□□ -0.71
LINC01541-201ENST00000566582 SYTL4Q96C24 671 aaPredicted RBP10.6□□□□□ -0.71
LINC01541-201ENST00000566582 UPF3BQ9BZI7 483 aaKnown RBP10.6□□□□□ -0.71
LINC01541-201ENST00000566582 GZF1Q9H116 711 aaPredicted RBP10.6□□□□□ -0.71
LINC01541-201ENST00000566582 TLR7Q9NYK1 1049 aaKnown RBP10.6□□□□□ -0.71
LINC01541-201ENST00000566582 TRAK2O60296 914 aa10.6□□□□□ -0.71
LINC01541-201ENST00000566582 MCM2P49736 904 aa10.6□□□□□ -0.71
LINC01541-201ENST00000566582 BOLA2Q9H3K6 86 aa10.6□□□□□ -0.71
LINC01541-201ENST00000566582 CWC22Q9HCG8 908 aaKnown RBP10.6□□□□□ -0.71
LINC01541-201ENST00000566582 ASAP1Q9ULH1 1129 aa10.6□□□□□ -0.71
LINC01541-201ENST00000566582 EPB41L2O43491 1005 aaKnown RBP10.59□□□□□ -0.71
LINC01541-201ENST00000566582 SSFA2P28290 1259 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 HSPA4P34932 840 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 PTPN12Q05209 780 aaKnown RBP10.59□□□□□ -0.71
LINC01541-201ENST00000566582 PIGBQ92521 554 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 COPRSQ9NQ92 184 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 KCPQ6ZWJ8 1503 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 RAD50Q92878 1312 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 GOLGA6L22H0YM25 854 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 NUCB2P80303 420 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 TFCP2Q12800 502 aa10.59□□□□□ -0.71
LINC01541-201ENST00000566582 RABL6Q3YEC7 729 aaPredicted RBP10.59□□□□□ -0.71
LINC01541-201ENST00000566582 ZGPATQ8N5A5 531 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms