RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 ADAMTS2O95450 1211 aa11.05□□□□□ -0.64
LSM3P5-201ENST00000566307 SSH3Q8TE77 659 aa11.05□□□□□ -0.64
LSM3P5-201ENST00000566307 PIGBQ92521 554 aa11.05□□□□□ -0.64
LSM3P5-201ENST00000566307 MAP3K2Q9Y2U5 619 aa11.05□□□□□ -0.64
LSM3P5-201ENST00000566307 DDB1Q16531 1140 aa11.04□□□□□ -0.64
LSM3P5-201ENST00000566307 BMP2KLQ5H9B9 411 aa11.04□□□□□ -0.64
LSM3P5-201ENST00000566307 SKAP1Q86WV1 359 aa11.04□□□□□ -0.64
LSM3P5-201ENST00000566307 PLCD3Q8N3E9 789 aa11.04□□□□□ -0.64
LSM3P5-201ENST00000566307 PLBD2Q8NHP8 589 aa11.04□□□□□ -0.64
LSM3P5-201ENST00000566307 METTL22Q9BUU2 404 aaPredicted RBP11.04□□□□□ -0.64
LSM3P5-201ENST00000566307 USP35Q9P2H5 1018 aa11.04□□□□□ -0.64
LSM3P5-201ENST00000566307 DOT1LQ8TEK3 1739 aa11.04□□□□□ -0.64
LSM3P5-201ENST00000566307 ANXA1P04083 346 aa11.03□□□□□ -0.64
LSM3P5-201ENST00000566307 NEXNQ0ZGT2 675 aa11.03□□□□□ -0.64
LSM3P5-201ENST00000566307 ANKRD45Q5TZF3 282 aa11.03□□□□□ -0.64
LSM3P5-201ENST00000566307 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
LSM3P5-201ENST00000566307 XAGE3Q8WTP9 111 aa11.03□□□□□ -0.64
LSM3P5-201ENST00000566307 ATG3Q9NT62 314 aa11.03□□□□□ -0.64
LSM3P5-201ENST00000566307 THSD7AQ9UPZ6 1657 aa11.03□□□□□ -0.64
LSM3P5-201ENST00000566307 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
LSM3P5-201ENST00000566307 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
LSM3P5-201ENST00000566307 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
LSM3P5-201ENST00000566307 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
LSM3P5-201ENST00000566307 EIF5BO60841 1220 aaKnown RBP11.02□□□□□ -0.65
LSM3P5-201ENST00000566307 RAB11FIP3O75154 756 aa11.02□□□□□ -0.65
LSM3P5-201ENST00000566307 PAXIP1Q6ZW49 1069 aaPredicted RBP11.02□□□□□ -0.65
LSM3P5-201ENST00000566307 COPS6Q7L5N1 327 aa11.02□□□□□ -0.65
LSM3P5-201ENST00000566307 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
LSM3P5-201ENST00000566307 SPDYE1Q8NFV5 336 aaPredicted RBP11.02□□□□□ -0.65
LSM3P5-201ENST00000566307 LRRFIP2Q9Y608 721 aaKnown RBP11.02□□□□□ -0.65
LSM3P5-201ENST00000566307 NEURL1BA8MQ27 555 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 NBPF26B4DH59 902 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 GRM8O00222 908 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 IGKV5-2P06315 115 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 EVX2Q03828 476 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 HSP90AB4PQ58FF6 505 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 NBPF14Q5TI25 921 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 NBPF10Q6P3W6 841 aaKnown RBP11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 RIC3Q7Z5B4 369 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 NBPF15Q8N660 670 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 LNPKQ9C0E8 428 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 OSBPL3Q9H4L5 887 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 RREB1Q92766 1687 aa11.01□□□□□ -0.65
LSM3P5-201ENST00000566307 STARD3NLO95772 234 aa11□□□□□ -0.65
LSM3P5-201ENST00000566307 NBPF7P0C2Y1 421 aaPredicted RBP11□□□□□ -0.65
LSM3P5-201ENST00000566307 PRKCSHP14314 528 aaPredicted RBP11□□□□□ -0.65
LSM3P5-201ENST00000566307 GCKRQ14397 625 aa11□□□□□ -0.65
LSM3P5-201ENST00000566307 MARCH10Q8NA82 808 aaPredicted RBP11□□□□□ -0.65
LSM3P5-201ENST00000566307 NGLY1Q96IV0 654 aa11□□□□□ -0.65
LSM3P5-201ENST00000566307 C9orf78Q9NZ63 289 aaPredicted RBP11□□□□□ -0.65
LSM3P5-201ENST00000566307 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
LSM3P5-201ENST00000566307 ASAP1Q9ULH1 1129 aa11□□□□□ -0.65
LSM3P5-201ENST00000566307 TJP1Q07157 1748 aa11□□□□□ -0.65
LSM3P5-201ENST00000566307 PNMA6EA0A0J9YXQ4 647 aa10.99□□□□□ -0.65
LSM3P5-201ENST00000566307 MYL6BP14649 208 aa10.99□□□□□ -0.65
LSM3P5-201ENST00000566307 ANP32AP39687 249 aaKnown RBP10.99□□□□□ -0.65
LSM3P5-201ENST00000566307 TRIM28Q13263 835 aaKnown RBP10.99□□□□□ -0.65
LSM3P5-201ENST00000566307 PLEKHM2Q8IWE5 1019 aa10.99□□□□□ -0.65
LSM3P5-201ENST00000566307 SMARCC1Q92922 1105 aaPredicted RBP10.99□□□□□ -0.65
LSM3P5-201ENST00000566307 AOX1Q06278 1338 aa10.99□□□□□ -0.65
LSM3P5-201ENST00000566307 ATRNO75882 1429 aa10.99□□□□□ -0.65
LSM3P5-201ENST00000566307 ONECUT3O60422 494 aaPredicted RBP10.98□□□□□ -0.65
LSM3P5-201ENST00000566307 PTCD1O75127 700 aaKnown RBP10.98□□□□□ -0.65
LSM3P5-201ENST00000566307 PRKAR2AP13861 404 aaKnown RBP10.98□□□□□ -0.65
LSM3P5-201ENST00000566307 AIMP1Q12904 312 aaKnown RBP10.98□□□□□ -0.65
LSM3P5-201ENST00000566307 PPP1R42Q7Z4L9 355 aa10.98□□□□□ -0.65
LSM3P5-201ENST00000566307 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
LSM3P5-201ENST00000566307 LRRCC1Q9C099 1032 aa10.98□□□□□ -0.65
LSM3P5-201ENST00000566307 SALL3Q9BXA9 1300 aa10.98□□□□□ -0.65
LSM3P5-201ENST00000566307 RGL2O15211 777 aa10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 A1BGP04217 495 aa10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 CYP19A1P11511 503 aaPredicted RBP10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 CWF19L2Q2TBE0 894 aaKnown RBP10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 RABL6Q3YEC7 729 aaPredicted RBP10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 DNAJC10Q8IXB1 793 aa10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 CCDC191Q8NCU4 936 aa10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 MYD88Q99836 296 aa10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 STAP2Q9UGK3 403 aa10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 USP21Q9UK80 565 aa10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 AFDNP55196 1824 aaKnown RBP10.97□□□□□ -0.65
LSM3P5-201ENST00000566307 H7C1W4 665 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 SRGAP3O43295 1099 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 HSPA1LP34931 641 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 IL6STP40189 918 aaPredicted RBP10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 CASP7P55210 303 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 TTC22Q5TAA0 569 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 ERC1Q8IUD2 1116 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 KIF1BPQ96EK5 621 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 KAZALD1Q96I82 304 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 ISCA1Q9BUE6 129 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 CCDC9Q9Y3X0 531 aaKnown RBP10.96□□□□□ -0.65
LSM3P5-201ENST00000566307 NHSQ6T4R5 1651 aa10.95□□□□□ -0.66
LSM3P5-201ENST00000566307 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
LSM3P5-201ENST00000566307 ERVV-1B6SEH8 477 aa10.95□□□□□ -0.66
LSM3P5-201ENST00000566307 HSP90AB3PQ58FF7 597 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms