RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 SSH3Q8TE77 659 aa18.25■□□□□ 0.51
NIP7-206ENST00000565034 RREB1Q92766 1687 aa18.25■□□□□ 0.51
NIP7-206ENST00000565034 AFF2P51816 1311 aa18.24■□□□□ 0.51
NIP7-206ENST00000565034 IGKV5-2P06315 115 aa18.24■□□□□ 0.51
NIP7-206ENST00000565034 PIP4K2AP48426 406 aaPredicted RBP18.24■□□□□ 0.51
NIP7-206ENST00000565034 C8orf34Q49A92 452 aa18.24■□□□□ 0.51
NIP7-206ENST00000565034 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
NIP7-206ENST00000565034 MYD88Q99836 296 aa18.24■□□□□ 0.51
NIP7-206ENST00000565034 NHSQ6T4R5 1651 aa18.24■□□□□ 0.51
NIP7-206ENST00000565034 COL15A1P39059 1388 aa18.23■□□□□ 0.51
NIP7-206ENST00000565034 PNMA6EA0A0J9YXQ4 647 aa18.23■□□□□ 0.51
NIP7-206ENST00000565034 POLA2Q14181 598 aa18.23■□□□□ 0.51
NIP7-206ENST00000565034 GJD4Q96KN9 370 aaPredicted RBP18.23■□□□□ 0.51
NIP7-206ENST00000565034 TRPC5Q9UL62 973 aaPredicted RBP18.23■□□□□ 0.51
NIP7-206ENST00000565034 CYP19A1P11511 503 aaPredicted RBP18.22■□□□□ 0.51
NIP7-206ENST00000565034 GCKRQ14397 625 aa18.22■□□□□ 0.51
NIP7-206ENST00000565034 PPP1R42Q7Z4L9 355 aa18.21■□□□□ 0.51
NIP7-206ENST00000565034 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.51
NIP7-206ENST00000565034 ANKRD36CQ5JPF3 1778 aa18.2■□□□□ 0.5
NIP7-206ENST00000565034 A0A0G2JS52 829 aa18.2■□□□□ 0.5
NIP7-206ENST00000565034 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
NIP7-206ENST00000565034 MYT1Q01538 1121 aa18.2■□□□□ 0.5
NIP7-206ENST00000565034 HSP90AB4PQ58FF6 505 aa18.2■□□□□ 0.5
NIP7-206ENST00000565034 KIF6Q6ZMV9 814 aa18.2■□□□□ 0.5
NIP7-206ENST00000565034 TTLL7Q6ZT98 887 aa18.2■□□□□ 0.5
NIP7-206ENST00000565034 SLC4A9Q96Q91 983 aa18.2■□□□□ 0.5
NIP7-206ENST00000565034 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
NIP7-206ENST00000565034 PALLDQ8WX93 1383 aa18.19■□□□□ 0.5
NIP7-206ENST00000565034 SRGAP3O43295 1099 aa18.19■□□□□ 0.5
NIP7-206ENST00000565034 ONECUT3O60422 494 aaPredicted RBP18.19■□□□□ 0.5
NIP7-206ENST00000565034 BMP2KLQ5H9B9 411 aa18.19■□□□□ 0.5
NIP7-206ENST00000565034 SUCLG2Q96I99 432 aa18.18■□□□□ 0.5
NIP7-206ENST00000565034 LRRCC1Q9C099 1032 aa18.18■□□□□ 0.5
NIP7-206ENST00000565034 BTAF1O14981 1849 aa18.18■□□□□ 0.5
NIP7-206ENST00000565034 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
NIP7-206ENST00000565034 IL6STP40189 918 aaPredicted RBP18.17■□□□□ 0.5
NIP7-206ENST00000565034 SIK1P57059 783 aa18.17■□□□□ 0.5
NIP7-206ENST00000565034 CCDC191Q8NCU4 936 aa18.17■□□□□ 0.5
NIP7-206ENST00000565034 CWC25Q9NXE8 425 aaPredicted RBP18.17■□□□□ 0.5
NIP7-206ENST00000565034 EXOC6BQ9Y2D4 811 aa18.17■□□□□ 0.5
NIP7-206ENST00000565034 SBF2Q86WG5 1849 aa18.16■□□□□ 0.5
NIP7-206ENST00000565034 PLEKHM2Q8IWE5 1019 aa18.16■□□□□ 0.5
NIP7-206ENST00000565034 ZBTB3Q9H5J0 574 aa18.16■□□□□ 0.5
NIP7-206ENST00000565034 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
NIP7-206ENST00000565034 MAP3K15Q6ZN16 1313 aa18.16■□□□□ 0.5
NIP7-206ENST00000565034 SURF6O75683 361 aaKnown RBP18.15■□□□□ 0.5
NIP7-206ENST00000565034 ATP6V1AP38606 617 aa18.15■□□□□ 0.5
NIP7-206ENST00000565034 TRIM28Q13263 835 aaKnown RBP18.15■□□□□ 0.5
NIP7-206ENST00000565034 HSP90AB3PQ58FF7 597 aa18.15■□□□□ 0.5
NIP7-206ENST00000565034 ISCA1Q9BUE6 129 aa18.15■□□□□ 0.5
NIP7-206ENST00000565034 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
NIP7-206ENST00000565034 A0A087WZG4 1122 aa18.14■□□□□ 0.49
NIP7-206ENST00000565034 ATP5J2-PTCD1G3V325 749 aa18.14■□□□□ 0.49
NIP7-206ENST00000565034 H7C1W4 665 aa18.14■□□□□ 0.49
NIP7-206ENST00000565034 ANP32AP39687 249 aaKnown RBP18.14■□□□□ 0.49
NIP7-206ENST00000565034 TCIRG1Q13488 830 aa18.14■□□□□ 0.49
NIP7-206ENST00000565034 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
NIP7-206ENST00000565034 ERC1Q8IUD2 1116 aa18.14■□□□□ 0.49
NIP7-206ENST00000565034 KAZALD1Q96I82 304 aa18.14■□□□□ 0.49
NIP7-206ENST00000565034 BICC1Q9H694 974 aaKnown RBP18.14■□□□□ 0.49
NIP7-206ENST00000565034 ZBTB1Q9Y2K1 713 aa18.14■□□□□ 0.49
NIP7-206ENST00000565034 ERVV-1B6SEH8 477 aa18.13■□□□□ 0.49
NIP7-206ENST00000565034 APBB1O00213 710 aa18.13■□□□□ 0.49
NIP7-206ENST00000565034 KCNQ2O43526 872 aa18.13■□□□□ 0.49
NIP7-206ENST00000565034 SMARCA5O60264 1052 aaPredicted RBP18.13■□□□□ 0.49
NIP7-206ENST00000565034 CASP7P55210 303 aa18.13■□□□□ 0.49
NIP7-206ENST00000565034 GIGYF2Q6Y7W6 1299 aaKnown RBP18.13■□□□□ 0.49
NIP7-206ENST00000565034 UBE3BQ7Z3V4 1068 aa18.13■□□□□ 0.49
NIP7-206ENST00000565034 KIF1BPQ96EK5 621 aa18.13■□□□□ 0.49
NIP7-206ENST00000565034 OSBPL3Q9H4L5 887 aa18.13■□□□□ 0.49
NIP7-206ENST00000565034 NUP98P52948 1817 aa18.13■□□□□ 0.49
NIP7-206ENST00000565034 LY75O60449 1722 aa18.12■□□□□ 0.49
NIP7-206ENST00000565034 RABL6Q3YEC7 729 aaPredicted RBP18.12■□□□□ 0.49
NIP7-206ENST00000565034 TTC22Q5TAA0 569 aa18.12■□□□□ 0.49
NIP7-206ENST00000565034 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
NIP7-206ENST00000565034 EIF5BO60841 1220 aaKnown RBP18.11■□□□□ 0.49
NIP7-206ENST00000565034 CRKLP46109 303 aaKnown RBP18.11■□□□□ 0.49
NIP7-206ENST00000565034 INTS5Q6P9B9 1019 aaKnown RBP18.11■□□□□ 0.49
NIP7-206ENST00000565034 SEPT12Q8IYM1 358 aa18.11■□□□□ 0.49
NIP7-206ENST00000565034 RHPN1Q8TCX5 695 aa18.11■□□□□ 0.49
NIP7-206ENST00000565034 QTRT2Q9H974 415 aaKnown RBP18.11■□□□□ 0.49
NIP7-206ENST00000565034 AOX1Q06278 1338 aa18.11■□□□□ 0.49
NIP7-206ENST00000565034 TUBGCP6Q96RT7 1819 aa18.1■□□□□ 0.49
NIP7-206ENST00000565034 SALL3Q9BXA9 1300 aa18.1■□□□□ 0.49
NIP7-206ENST00000565034 EIF5P55010 431 aaKnown RBP18.1■□□□□ 0.49
NIP7-206ENST00000565034 ITPK1Q13572 414 aa18.1■□□□□ 0.49
NIP7-206ENST00000565034 DZIP3Q86Y13 1208 aaKnown RBP18.1■□□□□ 0.49
NIP7-206ENST00000565034 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
NIP7-206ENST00000565034 UPF2Q9HAU5 1272 aaKnown RBP18.1■□□□□ 0.49
NIP7-206ENST00000565034 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
NIP7-206ENST00000565034 OS9Q13438 667 aaPredicted RBP18.09■□□□□ 0.49
NIP7-206ENST00000565034 MYH14Q7Z406 1995 aaKnown RBP18.09■□□□□ 0.49
NIP7-206ENST00000565034 CNTNAP4Q9C0A0 1308 aa18.08■□□□□ 0.49
NIP7-206ENST00000565034 PCCAP05165 728 aaPredicted RBP18.08■□□□□ 0.48
NIP7-206ENST00000565034 PDE1AP54750 535 aa18.08■□□□□ 0.48
NIP7-206ENST00000565034 EPHA10Q5JZY3 1008 aa18.08■□□□□ 0.48
NIP7-206ENST00000565034 STAP2Q9UGK3 403 aa18.08■□□□□ 0.48
NIP7-206ENST00000565034 BRWD3Q6RI45 1802 aa18.07■□□□□ 0.48
NIP7-206ENST00000565034 MX1P20591 662 aa18.07■□□□□ 0.48
NIP7-206ENST00000565034 G3BP1Q13283 466 aaKnown RBP eCLIP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms