RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 ZNF445P59923 1031 aa27.05■■□□□ 1.92
SPSB3-206ENST00000564709 FOXD4L6Q3SYB3 417 aaPredicted RBP27.05■■□□□ 1.92
SPSB3-206ENST00000564709 FOXD4L3Q6VB84 417 aaPredicted RBP27.05■■□□□ 1.92
SPSB3-206ENST00000564709 INTS4Q96HW7 963 aaKnown RBP27.05■■□□□ 1.92
SPSB3-206ENST00000564709 LARP6Q9BRS8 491 aaKnown RBP27.05■■□□□ 1.92
SPSB3-206ENST00000564709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.05■■□□□ 1.92
SPSB3-206ENST00000564709 ALS2Q96Q42 1657 aa27.05■■□□□ 1.92
SPSB3-206ENST00000564709 GRM8O00222 908 aa27.04■■□□□ 1.92
SPSB3-206ENST00000564709 MYL6BP14649 208 aa27.04■■□□□ 1.92
SPSB3-206ENST00000564709 PDIA6Q15084 440 aa27.04■■□□□ 1.92
SPSB3-206ENST00000564709 KAZALD1Q96I82 304 aa27.04■■□□□ 1.92
SPSB3-206ENST00000564709 BICC1Q9H694 974 aaKnown RBP27.04■■□□□ 1.92
SPSB3-206ENST00000564709 DDX21Q9NR30 783 aaKnown RBP eCLIP27.04■■□□□ 1.92
SPSB3-206ENST00000564709 ERBB4Q15303 1308 aa27.04■■□□□ 1.92
SPSB3-206ENST00000564709 KDM6AO15550 1401 aaPredicted RBP27.04■■□□□ 1.92
SPSB3-206ENST00000564709 KIAA1211Q6ZU35 1233 aa27.04■■□□□ 1.92
SPSB3-206ENST00000564709 LINS1Q8NG48 757 aa27.04■■□□□ 1.92
SPSB3-206ENST00000564709 RAPGEF4Q8WZA2 1011 aa27.04■■□□□ 1.92
SPSB3-206ENST00000564709 DIAPH3Q9NSV4 1193 aa27.04■■□□□ 1.92
SPSB3-206ENST00000564709 EPB41L2O43491 1005 aaKnown RBP27.03■■□□□ 1.92
SPSB3-206ENST00000564709 IFIT2P09913 472 aaKnown RBP27.03■■□□□ 1.92
SPSB3-206ENST00000564709 AACSQ86V21 672 aa27.03■■□□□ 1.92
SPSB3-206ENST00000564709 ECHDC1Q9NTX5 307 aa27.03■■□□□ 1.92
SPSB3-206ENST00000564709 TRIM44Q96DX7 344 aaPredicted RBP27.02■■□□□ 1.92
SPSB3-206ENST00000564709 SCN11AQ9UI33 1791 aa27.02■■□□□ 1.92
SPSB3-206ENST00000564709 ZNF790Q6PG37 636 aa27.02■■□□□ 1.92
SPSB3-206ENST00000564709 DDX58O95786 925 aaKnown RBP27.01■■□□□ 1.91
SPSB3-206ENST00000564709 CPA1P15085 419 aa27.01■■□□□ 1.91
SPSB3-206ENST00000564709 RIC3Q7Z5B4 369 aa27.01■■□□□ 1.91
SPSB3-206ENST00000564709 TMEM63CQ9P1W3 806 aa27.01■■□□□ 1.91
SPSB3-206ENST00000564709 NFATC2IPQ8NCF5 419 aa27■■□□□ 1.91
SPSB3-206ENST00000564709 SIL1Q9H173 461 aa27■■□□□ 1.91
SPSB3-206ENST00000564709 C19orf44Q9H6X5 657 aa27■■□□□ 1.91
SPSB3-206ENST00000564709 NPHP3Q7Z494 1330 aa27■■□□□ 1.91
SPSB3-206ENST00000564709 IGKV5-2P06315 115 aa27■■□□□ 1.91
SPSB3-206ENST00000564709 ERC1Q8IUD2 1116 aa27■■□□□ 1.91
SPSB3-206ENST00000564709 SLC52A2Q9HAB3 445 aa27■■□□□ 1.91
SPSB3-206ENST00000564709 MEGF6O75095 1541 aa27■■□□□ 1.91
SPSB3-206ENST00000564709 AK2P54819 239 aa26.99■■□□□ 1.91
SPSB3-206ENST00000564709 PTH1RQ03431 593 aa26.99■■□□□ 1.91
SPSB3-206ENST00000564709 CABLES1Q8TDN4 633 aa26.99■■□□□ 1.91
SPSB3-206ENST00000564709 GPATCH3Q96I76 525 aa26.99■■□□□ 1.91
SPSB3-206ENST00000564709 SASH1O94885 1247 aa26.99■■□□□ 1.91
SPSB3-206ENST00000564709 PIP4K2AP48426 406 aaPredicted RBP26.99■■□□□ 1.91
SPSB3-206ENST00000564709 PRIM1P49642 420 aaKnown RBP26.99■■□□□ 1.91
SPSB3-206ENST00000564709 TTC14Q96N46 770 aa26.99■■□□□ 1.91
SPSB3-206ENST00000564709 ESPNB1AK53 854 aa26.98■■□□□ 1.91
SPSB3-206ENST00000564709 KLHDC4Q8TBB5 520 aa26.98■■□□□ 1.91
SPSB3-206ENST00000564709 RBSNQ9H1K0 784 aa26.98■■□□□ 1.91
SPSB3-206ENST00000564709 PHKG2P15735 406 aa26.98■■□□□ 1.91
SPSB3-206ENST00000564709 CLCN1P35523 988 aa26.98■■□□□ 1.91
SPSB3-206ENST00000564709 CCDC8Q9H0W5 538 aaPredicted RBP26.98■■□□□ 1.91
SPSB3-206ENST00000564709 TATP17735 454 aaPredicted RBP26.97■■□□□ 1.91
SPSB3-206ENST00000564709 TLR7Q9NYK1 1049 aaKnown RBP26.97■■□□□ 1.91
SPSB3-206ENST00000564709 UTYO14607 1347 aa26.97■■□□□ 1.91
SPSB3-206ENST00000564709 CSB-PGBD3P0DP91 1061 aa26.96■■□□□ 1.91
SPSB3-206ENST00000564709 CASTP20810 708 aaKnown RBP26.96■■□□□ 1.91
SPSB3-206ENST00000564709 CCDC173Q0VFZ6 552 aa26.96■■□□□ 1.91
SPSB3-206ENST00000564709 XAGE3Q8WTP9 111 aa26.96■■□□□ 1.91
SPSB3-206ENST00000564709 EAF2Q96CJ1 260 aaPredicted RBP26.96■■□□□ 1.91
SPSB3-206ENST00000564709 GDPD2Q9HCC8 539 aa26.96■■□□□ 1.91
SPSB3-206ENST00000564709 HDAC5Q9UQL6 1122 aa26.96■■□□□ 1.91
SPSB3-206ENST00000564709 SYCE3A1L190 88 aa26.96■■□□□ 1.91
SPSB3-206ENST00000564709 G3BP1Q13283 466 aaKnown RBP eCLIP26.96■■□□□ 1.91
SPSB3-206ENST00000564709 RUFY3Q7L099 469 aa26.96■■□□□ 1.91
SPSB3-206ENST00000564709 LMTK3Q96Q04 1460 aa26.96■■□□□ 1.91
SPSB3-206ENST00000564709 RPAP1Q9BWH6 1393 aaPredicted RBP26.96■■□□□ 1.91
SPSB3-206ENST00000564709 CHRNA2Q15822 529 aa26.95■■□□□ 1.91
SPSB3-206ENST00000564709 ZNF496Q96IT1 587 aaPredicted RBP26.95■■□□□ 1.91
SPSB3-206ENST00000564709 PRPF40BQ6NWY9 871 aaKnown RBP26.95■■□□□ 1.9
SPSB3-206ENST00000564709 RUFY2Q8WXA3 655 aa26.95■■□□□ 1.9
SPSB3-206ENST00000564709 JARID2Q92833 1246 aaPredicted RBP26.95■■□□□ 1.9
SPSB3-206ENST00000564709 MYD88Q99836 296 aa26.95■■□□□ 1.9
SPSB3-206ENST00000564709 TCHHQ07283 1943 aa26.94■■□□□ 1.9
SPSB3-206ENST00000564709 DTNBO60941 627 aa26.94■■□□□ 1.9
SPSB3-206ENST00000564709 COPS6Q7L5N1 327 aa26.94■■□□□ 1.9
SPSB3-206ENST00000564709 ANP32BQ92688 251 aaKnown RBP26.94■■□□□ 1.9
SPSB3-206ENST00000564709 MST1RQ04912 1400 aa26.93■■□□□ 1.9
SPSB3-206ENST00000564709 NEURL1BA8MQ27 555 aa26.93■■□□□ 1.9
SPSB3-206ENST00000564709 ATF3P18847 181 aa26.93■■□□□ 1.9
SPSB3-206ENST00000564709 ADCK5Q3MIX3 580 aa26.93■■□□□ 1.9
SPSB3-206ENST00000564709 LARP1Q6PKG0 1096 aaKnown RBP26.93■■□□□ 1.9
SPSB3-206ENST00000564709 DDX54Q8TDD1 881 aaKnown RBP26.93■■□□□ 1.9
SPSB3-206ENST00000564709 EVI5LQ96CN4 794 aa26.93■■□□□ 1.9
SPSB3-206ENST00000564709 PPP1R9BQ96SB3 815 aa26.93■■□□□ 1.9
SPSB3-206ENST00000564709 EPHA10Q5JZY3 1008 aa26.93■■□□□ 1.9
SPSB3-206ENST00000564709 WDR33Q9C0J8 1336 aaKnown RBP26.92■■□□□ 1.9
SPSB3-206ENST00000564709 LARGE1O95461 756 aa26.92■■□□□ 1.9
SPSB3-206ENST00000564709 NEXNQ0ZGT2 675 aa26.92■■□□□ 1.9
SPSB3-206ENST00000564709 FAM227BQ96M60 508 aa26.92■■□□□ 1.9
SPSB3-206ENST00000564709 COL18A1P39060 1754 aa26.92■■□□□ 1.9
SPSB3-206ENST00000564709 JAKMIP1Q96N16 626 aaKnown RBP26.91■■□□□ 1.9
SPSB3-206ENST00000564709 LIMCH1Q9UPQ0 1083 aa26.91■■□□□ 1.9
SPSB3-206ENST00000564709 MBD3O95983 291 aa26.91■■□□□ 1.9
SPSB3-206ENST00000564709 USP16Q9Y5T5 823 aa26.91■■□□□ 1.9
SPSB3-206ENST00000564709 GCKRQ14397 625 aa26.9■■□□□ 1.9
SPSB3-206ENST00000564709 TMEM94Q12767 1356 aa26.9■■□□□ 1.9
SPSB3-206ENST00000564709 GADD45BO75293 160 aaPredicted RBP26.9■■□□□ 1.9
SPSB3-206ENST00000564709 NMIQ13287 307 aaPredicted RBP26.9■■□□□ 1.9
SPSB3-206ENST00000564709 IFNL2Q8IZJ0 200 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms