RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 DNAAF4Q8WXU2 420 aa9.18□□□□□ -0.94
ATXN3-249ENST00000564606 ARXQ96QS3 562 aa9.18□□□□□ -0.94
ATXN3-249ENST00000564606 TM6SF1Q9BZW5 370 aa9.18□□□□□ -0.94
ATXN3-249ENST00000564606 TSPY26PQ9H489 355 aa9.18□□□□□ -0.94
ATXN3-249ENST00000564606 USP42Q9H9J4 1324 aaKnown RBP9.18□□□□□ -0.94
ATXN3-249ENST00000564606 HYPKQ9NX55 129 aa9.18□□□□□ -0.94
ATXN3-249ENST00000564606 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-249ENST00000564606 KIF3AQ9Y496 699 aa9.18□□□□□ -0.94
ATXN3-249ENST00000564606 LRRC37A3O60309 1634 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 LMTK3Q96Q04 1460 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 SALL3Q9BXA9 1300 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 GOLGA6L6A8MZA4 724 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 PRPF40AO75400 957 aaKnown RBP9.17□□□□□ -0.94
ATXN3-249ENST00000564606 LTKP29376 864 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 HSPA4P34932 840 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 KIAA2012Q0VF49 1180 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 NEXNQ0ZGT2 675 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 MTX1Q13505 466 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 C16orf71Q8IYS4 520 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-249ENST00000564606 RHPN1Q8TCX5 695 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 EVI5LQ96CN4 794 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 LIMCH1Q9UPQ0 1083 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 EXOC6BQ9Y2D4 811 aa9.17□□□□□ -0.94
ATXN3-249ENST00000564606 LRRFIP2Q9Y608 721 aaKnown RBP9.17□□□□□ -0.94
ATXN3-249ENST00000564606 CEMIPQ8WUJ3 1361 aa9.16□□□□□ -0.94
ATXN3-249ENST00000564606 SMARCA5O60264 1052 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-249ENST00000564606 PTMAP06454 111 aaKnown RBP9.16□□□□□ -0.94
ATXN3-249ENST00000564606 IFIT2P09913 472 aaKnown RBP9.16□□□□□ -0.94
ATXN3-249ENST00000564606 KRT32Q14532 448 aa9.16□□□□□ -0.94
ATXN3-249ENST00000564606 TMEM87AQ8NBN3 555 aa9.16□□□□□ -0.94
ATXN3-249ENST00000564606 SLC26A8Q96RN1 970 aa9.16□□□□□ -0.94
ATXN3-249ENST00000564606 TMEM106CQ9BVX2 250 aa9.16□□□□□ -0.94
ATXN3-249ENST00000564606 RRAGDQ9NQL2 400 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-249ENST00000564606 C9orf78Q9NZ63 289 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-249ENST00000564606 NOL7Q9UMY1 257 aaKnown RBP9.16□□□□□ -0.94
ATXN3-249ENST00000564606 SMC3Q9UQE7 1217 aa9.16□□□□□ -0.94
ATXN3-249ENST00000564606 N4BP2Q86UW6 1770 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-249ENST00000564606 NCKAP5LQ9HCH0 1330 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 SGSM2O43147 1006 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 SRGAP3O43295 1099 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 GALR2O43603 387 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-249ENST00000564606 CD2BP2O95400 341 aaKnown RBP9.15□□□□□ -0.94
ATXN3-249ENST00000564606 CAVIN2O95810 425 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 UBE2HP62256 183 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 PSME1Q06323 249 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 G3BP1Q13283 466 aaKnown RBP eCLIP9.15□□□□□ -0.94
ATXN3-249ENST00000564606 LRRFIP1Q32MZ4 808 aaKnown RBP9.15□□□□□ -0.94
ATXN3-249ENST00000564606 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 VPS53Q5VIR6 699 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 PPP1R42Q7Z4L9 355 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 PANK2Q9BZ23 570 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 USP44Q9H0E7 712 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 ECHDC1Q9NTX5 307 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 RYDENQ9NUL5 291 aaKnown RBP9.15□□□□□ -0.94
ATXN3-249ENST00000564606 HMG20BQ9P0W2 317 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 CYP46A1Q9Y6A2 500 aa9.15□□□□□ -0.94
ATXN3-249ENST00000564606 PEAK1Q9H792 1746 aa9.14□□□□□ -0.95
ATXN3-249ENST00000564606 BTBD11A6QL63 1104 aa9.14□□□□□ -0.95
ATXN3-249ENST00000564606 F6X3S4 739 aa9.14□□□□□ -0.95
ATXN3-249ENST00000564606 SOX12O15370 315 aa9.14□□□□□ -0.95
ATXN3-249ENST00000564606 ZNF500O60304 480 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-249ENST00000564606 OFD1O75665 1012 aa9.14□□□□□ -0.95
ATXN3-249ENST00000564606 KCNJ4P48050 445 aa9.14□□□□□ -0.95
ATXN3-249ENST00000564606 EIF4A1P60842 406 aaKnown RBP9.14□□□□□ -0.95
ATXN3-249ENST00000564606 HMGN5P82970 282 aaKnown RBP9.14□□□□□ -0.95
ATXN3-249ENST00000564606 HSP90AA2PQ14568 343 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-249ENST00000564606 TPRNQ4KMQ1 711 aa9.14□□□□□ -0.95
ATXN3-249ENST00000564606 C14orf37Q86TY3 774 aa9.14□□□□□ -0.95
ATXN3-249ENST00000564606 PDLIM2Q96JY6 352 aa9.14□□□□□ -0.95
ATXN3-249ENST00000564606 XRN1Q8IZH2 1706 aaKnown RBP9.14□□□□□ -0.95
ATXN3-249ENST00000564606 NUTM2FA1L443 756 aa9.13□□□□□ -0.95
ATXN3-249ENST00000564606 DHX8Q14562 1220 aaKnown RBP9.13□□□□□ -0.95
ATXN3-249ENST00000564606 ZNF530Q6P9A1 599 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-249ENST00000564606 LARP1Q6PKG0 1096 aaKnown RBP9.13□□□□□ -0.95
ATXN3-249ENST00000564606 KSR2Q6VAB6 950 aa9.13□□□□□ -0.95
ATXN3-249ENST00000564606 G2E3Q7L622 706 aa9.13□□□□□ -0.95
ATXN3-249ENST00000564606 IL17REQ8NFR9 667 aa9.13□□□□□ -0.95
ATXN3-249ENST00000564606 LINS1Q8NG48 757 aa9.13□□□□□ -0.95
ATXN3-249ENST00000564606 ALDH8A1Q9H2A2 487 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-249ENST00000564606 FAM208AQ9UK61 1670 aaKnown RBP9.13□□□□□ -0.95
ATXN3-249ENST00000564606 RFX7Q2KHR2 1363 aa9.12□□□□□ -0.95
ATXN3-249ENST00000564606 ZSCAN22P10073 491 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-249ENST00000564606 CHAF1AQ13111 956 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-249ENST00000564606 KRT24Q2M2I5 525 aa9.12□□□□□ -0.95
ATXN3-249ENST00000564606 BEND3Q5T5X7 828 aa9.12□□□□□ -0.95
ATXN3-249ENST00000564606 OTUD7AQ8TE49 926 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-249ENST00000564606 ANO8Q9HCE9 1232 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-249ENST00000564606 BMP2KQ9NSY1 1161 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-249ENST00000564606 MIS18AQ9NYP9 233 aa9.12□□□□□ -0.95
ATXN3-249ENST00000564606 ZKSCAN5Q9Y2L8 839 aa9.12□□□□□ -0.95
ATXN3-249ENST00000564606 CCDC171Q6TFL3 1326 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 KIF13AQ9H1H9 1805 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 PNMA6EA0A0J9YXQ4 647 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 GOLGA6L4A6NEF3 574 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 TTLL13PA6NNM8 815 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 FOXO3O43524 673 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 STX6O43752 255 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 HMGB1P09429 215 aaKnown RBP9.11□□□□□ -0.95
ATXN3-249ENST00000564606 GAS2L3Q86XJ1 694 aa9.11□□□□□ -0.95
ATXN3-249ENST00000564606 SCAND2PQ9GZW5 306 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms