RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 HSP90AB4PQ58FF6 505 aa19.32■□□□□ 0.68
COMMD4-210ENST00000564587 RAB11FIP3O75154 756 aa19.31■□□□□ 0.68
COMMD4-210ENST00000564587 A1BGP04217 495 aa19.31■□□□□ 0.68
COMMD4-210ENST00000564587 NBPF7P0C2Y1 421 aaPredicted RBP19.31■□□□□ 0.68
COMMD4-210ENST00000564587 POLA2Q14181 598 aa19.31■□□□□ 0.68
COMMD4-210ENST00000564587 C8orf34Q49A92 452 aa19.31■□□□□ 0.68
COMMD4-210ENST00000564587 DNAJC10Q8IXB1 793 aa19.31■□□□□ 0.68
COMMD4-210ENST00000564587 MYD88Q99836 296 aa19.31■□□□□ 0.68
COMMD4-210ENST00000564587 TRPC5Q9UL62 973 aaPredicted RBP19.31■□□□□ 0.68
COMMD4-210ENST00000564587 ARFGEF2Q9Y6D5 1785 aa19.31■□□□□ 0.68
COMMD4-210ENST00000564587 IGKV5-2P06315 115 aa19.3■□□□□ 0.68
COMMD4-210ENST00000564587 GCKRQ14397 625 aa19.3■□□□□ 0.68
COMMD4-210ENST00000564587 CWF19L2Q2TBE0 894 aaKnown RBP19.3■□□□□ 0.68
COMMD4-210ENST00000564587 GJD4Q96KN9 370 aaPredicted RBP19.3■□□□□ 0.68
COMMD4-210ENST00000564587 COL15A1P39059 1388 aa19.3■□□□□ 0.68
COMMD4-210ENST00000564587 THSD7AQ9UPZ6 1657 aa19.3■□□□□ 0.68
COMMD4-210ENST00000564587 AFF2P51816 1311 aa19.29■□□□□ 0.68
COMMD4-210ENST00000564587 PPP1R42Q7Z4L9 355 aa19.29■□□□□ 0.68
COMMD4-210ENST00000564587 ATRNO75882 1429 aa19.28■□□□□ 0.68
COMMD4-210ENST00000564587 PNMA6EA0A0J9YXQ4 647 aa19.28■□□□□ 0.68
COMMD4-210ENST00000564587 EIF5BO60841 1220 aaKnown RBP19.28■□□□□ 0.68
COMMD4-210ENST00000564587 CYP19A1P11511 503 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-210ENST00000564587 KIF6Q6ZMV9 814 aa19.28■□□□□ 0.68
COMMD4-210ENST00000564587 CICQ96RK0 1608 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-210ENST00000564587 SRGAP3O43295 1099 aa19.27■□□□□ 0.68
COMMD4-210ENST00000564587 ONECUT3O60422 494 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-210ENST00000564587 BMP2KLQ5H9B9 411 aa19.27■□□□□ 0.68
COMMD4-210ENST00000564587 NPM2Q86SE8 214 aaKnown RBP19.27■□□□□ 0.68
COMMD4-210ENST00000564587 LRRCC1Q9C099 1032 aa19.27■□□□□ 0.68
COMMD4-210ENST00000564587 NUP188Q5SRE5 1749 aa19.26■□□□□ 0.67
COMMD4-210ENST00000564587 AFDNP55196 1824 aaKnown RBP19.26■□□□□ 0.67
COMMD4-210ENST00000564587 A0A0G2JS52 829 aa19.26■□□□□ 0.67
COMMD4-210ENST00000564587 ANP32AP39687 249 aaKnown RBP19.26■□□□□ 0.67
COMMD4-210ENST00000564587 IL6STP40189 918 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-210ENST00000564587 PIP4K2AP48426 406 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-210ENST00000564587 MYT1Q01538 1121 aa19.26■□□□□ 0.67
COMMD4-210ENST00000564587 HSP90AB3PQ58FF7 597 aa19.26■□□□□ 0.67
COMMD4-210ENST00000564587 CCDC191Q8NCU4 936 aa19.26■□□□□ 0.67
COMMD4-210ENST00000564587 ACSBG1Q96GR2 724 aa19.26■□□□□ 0.67
COMMD4-210ENST00000564587 ZNF831Q5JPB2 1677 aa19.25■□□□□ 0.67
COMMD4-210ENST00000564587 TRIM28Q13263 835 aaKnown RBP19.25■□□□□ 0.67
COMMD4-210ENST00000564587 TTLL7Q6ZT98 887 aa19.25■□□□□ 0.67
COMMD4-210ENST00000564587 CWC25Q9NXE8 425 aaPredicted RBP19.25■□□□□ 0.67
COMMD4-210ENST00000564587 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
COMMD4-210ENST00000564587 ERC1Q8IUD2 1116 aa19.24■□□□□ 0.67
COMMD4-210ENST00000564587 SLC4A9Q96Q91 983 aa19.24■□□□□ 0.67
COMMD4-210ENST00000564587 TJP1Q07157 1748 aa19.24■□□□□ 0.67
COMMD4-210ENST00000564587 PALLDQ8WX93 1383 aa19.23■□□□□ 0.67
COMMD4-210ENST00000564587 LOC102724428A0A0B4J2F2 783 aa19.23■□□□□ 0.67
COMMD4-210ENST00000564587 SURF6O75683 361 aaKnown RBP19.23■□□□□ 0.67
COMMD4-210ENST00000564587 SIK1P57059 783 aa19.23■□□□□ 0.67
COMMD4-210ENST00000564587 TCIRG1Q13488 830 aa19.23■□□□□ 0.67
COMMD4-210ENST00000564587 PLEKHM2Q8IWE5 1019 aa19.23■□□□□ 0.67
COMMD4-210ENST00000564587 KIF1BPQ96EK5 621 aa19.23■□□□□ 0.67
COMMD4-210ENST00000564587 SUCLG2Q96I99 432 aa19.23■□□□□ 0.67
COMMD4-210ENST00000564587 EXOC6BQ9Y2D4 811 aa19.23■□□□□ 0.67
COMMD4-210ENST00000564587 MAP3K15Q6ZN16 1313 aa19.23■□□□□ 0.67
COMMD4-210ENST00000564587 A0A087WZG4 1122 aa19.22■□□□□ 0.67
COMMD4-210ENST00000564587 ERVV-1B6SEH8 477 aa19.22■□□□□ 0.67
COMMD4-210ENST00000564587 ATP6V1AP38606 617 aa19.22■□□□□ 0.67
COMMD4-210ENST00000564587 OSBPL3Q9H4L5 887 aa19.22■□□□□ 0.67
COMMD4-210ENST00000564587 UPF2Q9HAU5 1272 aaKnown RBP19.22■□□□□ 0.67
COMMD4-210ENST00000564587 H7C1W4 665 aa19.21■□□□□ 0.67
COMMD4-210ENST00000564587 ISCA1Q9BUE6 129 aa19.21■□□□□ 0.67
COMMD4-210ENST00000564587 CCDC87Q9NVE4 849 aa19.21■□□□□ 0.67
COMMD4-210ENST00000564587 ATP5J2-PTCD1G3V325 749 aa19.2■□□□□ 0.66
COMMD4-210ENST00000564587 GIGYF2Q6Y7W6 1299 aaKnown RBP19.2■□□□□ 0.66
COMMD4-210ENST00000564587 ZBTB3Q9H5J0 574 aa19.2■□□□□ 0.66
COMMD4-210ENST00000564587 BICC1Q9H694 974 aaKnown RBP19.2■□□□□ 0.66
COMMD4-210ENST00000564587 RABL6Q3YEC7 729 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-210ENST00000564587 QTRT2Q9H974 415 aaKnown RBP19.19■□□□□ 0.66
COMMD4-210ENST00000564587 ZBTB1Q9Y2K1 713 aa19.19■□□□□ 0.66
COMMD4-210ENST00000564587 AOX1Q06278 1338 aa19.19■□□□□ 0.66
COMMD4-210ENST00000564587 NHSQ6T4R5 1651 aa19.18■□□□□ 0.66
COMMD4-210ENST00000564587 RREB1Q92766 1687 aa19.18■□□□□ 0.66
COMMD4-210ENST00000564587 APBB1O00213 710 aa19.18■□□□□ 0.66
COMMD4-210ENST00000564587 CASP7P55210 303 aa19.18■□□□□ 0.66
COMMD4-210ENST00000564587 OS9Q13438 667 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-210ENST00000564587 TTC22Q5TAA0 569 aa19.18■□□□□ 0.66
COMMD4-210ENST00000564587 UBE3BQ7Z3V4 1068 aa19.18■□□□□ 0.66
COMMD4-210ENST00000564587 RHPN1Q8TCX5 695 aa19.18■□□□□ 0.66
COMMD4-210ENST00000564587 KAZALD1Q96I82 304 aa19.18■□□□□ 0.66
COMMD4-210ENST00000564587 ZNF330Q9Y3S2 320 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-210ENST00000564587 KCNQ2O43526 872 aa19.17■□□□□ 0.66
COMMD4-210ENST00000564587 SMARCA5O60264 1052 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-210ENST00000564587 EIF5P55010 431 aaKnown RBP19.17■□□□□ 0.66
COMMD4-210ENST00000564587 G3BP1Q13283 466 aaKnown RBP eCLIP19.17■□□□□ 0.66
COMMD4-210ENST00000564587 RGL2O15211 777 aa19.16■□□□□ 0.66
COMMD4-210ENST00000564587 HMGB2P26583 209 aaKnown RBP19.16■□□□□ 0.66
COMMD4-210ENST00000564587 CRKLP46109 303 aaKnown RBP19.16■□□□□ 0.66
COMMD4-210ENST00000564587 SEPT12Q8IYM1 358 aa19.16■□□□□ 0.66
COMMD4-210ENST00000564587 STAP2Q9UGK3 403 aa19.16■□□□□ 0.66
COMMD4-210ENST00000564587 PCCAP05165 728 aaPredicted RBP19.15■□□□□ 0.66
COMMD4-210ENST00000564587 PDE1AP54750 535 aa19.15■□□□□ 0.66
COMMD4-210ENST00000564587 INTS5Q6P9B9 1019 aaKnown RBP19.15■□□□□ 0.66
COMMD4-210ENST00000564587 DZIP3Q86Y13 1208 aaKnown RBP19.15■□□□□ 0.66
COMMD4-210ENST00000564587 C16orf71Q8IYS4 520 aaPredicted RBP19.15■□□□□ 0.66
COMMD4-210ENST00000564587 COPRSQ9NQ92 184 aa19.15■□□□□ 0.66
COMMD4-210ENST00000564587 CDC45O75419 566 aa19.14■□□□□ 0.65
COMMD4-210ENST00000564587 MX1P20591 662 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms