RNA–Protein interactions for RNA: ENST00000564289.1

CASKIN1-203, Transcript of CASK interacting protein 1, humanhuman

TSL 3

Gene CASKIN1, Length 193 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1-203ENST00000564289 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
CASKIN1-203ENST00000564289 COL3A1P02461 1466 aaPredicted RBP16.39■□□□□ 0.21
CASKIN1-203ENST00000564289 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
CASKIN1-203ENST00000564289 FER1L6Q2WGJ9 1857 aa16.38■□□□□ 0.21
CASKIN1-203ENST00000564289 BTBD11A6QL63 1104 aa16.38■□□□□ 0.21
CASKIN1-203ENST00000564289 U2SURPO15042 1029 aaKnown RBP16.38■□□□□ 0.21
CASKIN1-203ENST00000564289 ST5P78524 1137 aa16.38■□□□□ 0.21
CASKIN1-203ENST00000564289 DZIP3Q86Y13 1208 aaKnown RBP16.38■□□□□ 0.21
CASKIN1-203ENST00000564289 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
CASKIN1-203ENST00000564289 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
CASKIN1-203ENST00000564289 IQCA1LA6NCM1 817 aa16.37■□□□□ 0.21
CASKIN1-203ENST00000564289 ITGBL1O95965 494 aaPredicted RBP16.37■□□□□ 0.21
CASKIN1-203ENST00000564289 NPM2Q86SE8 214 aaKnown RBP16.37■□□□□ 0.21
CASKIN1-203ENST00000564289 LDHDQ86WU2 507 aa16.37■□□□□ 0.21
CASKIN1-203ENST00000564289 TAF1DQ9H5J8 278 aaPredicted RBP16.37■□□□□ 0.21
CASKIN1-203ENST00000564289 RGL2O15211 777 aa16.36■□□□□ 0.21
CASKIN1-203ENST00000564289 NPR1P16066 1061 aa16.36■□□□□ 0.21
CASKIN1-203ENST00000564289 CNTNAP1P78357 1384 aa16.36■□□□□ 0.21
CASKIN1-203ENST00000564289 SCN7AQ01118 1682 aa16.35■□□□□ 0.21
CASKIN1-203ENST00000564289 PRAMEF22A3QJZ6 481 aa16.35■□□□□ 0.21
CASKIN1-203ENST00000564289 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
CASKIN1-203ENST00000564289 RSPH6AQ9H0K4 717 aa16.35■□□□□ 0.21
CASKIN1-203ENST00000564289 COL11A2P13942 1736 aaPredicted RBP16.35■□□□□ 0.21
CASKIN1-203ENST00000564289 SLX4Q8IY92 1834 aa16.35■□□□□ 0.21
CASKIN1-203ENST00000564289 DICER1Q9UPY3 1922 aaKnown RBP16.35■□□□□ 0.21
CASKIN1-203ENST00000564289 VIRMAQ69YN4 1812 aaKnown RBP16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 NBPF26B4DH59 902 aa16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 NPHP1O15259 732 aa16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 FOXN1O15353 648 aa16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 SNRPA1P09661 255 aaKnown RBP16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 NBPF10Q6P3W6 841 aaKnown RBP16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 TPTE2Q6XPS3 522 aa16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 NBPF15Q8N660 670 aa16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 PRDM10Q9NQV6 1147 aa16.34■□□□□ 0.21
CASKIN1-203ENST00000564289 PRKAR2BP31323 418 aa16.33■□□□□ 0.2
CASKIN1-203ENST00000564289 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
CASKIN1-203ENST00000564289 TMEM88BA6NKF7 163 aa16.32■□□□□ 0.2
CASKIN1-203ENST00000564289 SIPA1L3O60292 1781 aaPredicted RBP16.32■□□□□ 0.2
CASKIN1-203ENST00000564289 VEGFBP49765 207 aa16.32■□□□□ 0.2
CASKIN1-203ENST00000564289 RTKN2Q8IZC4 609 aa16.32■□□□□ 0.2
CASKIN1-203ENST00000564289 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
CASKIN1-203ENST00000564289 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
CASKIN1-203ENST00000564289 ZNF541Q9H0D2 1346 aa16.31■□□□□ 0.2
CASKIN1-203ENST00000564289 FZD9O00144 591 aa16.31■□□□□ 0.2
CASKIN1-203ENST00000564289 OLFM4Q6UX06 510 aa16.31■□□□□ 0.2
CASKIN1-203ENST00000564289 CCER1Q8TC90 406 aaPredicted RBP16.31■□□□□ 0.2
CASKIN1-203ENST00000564289 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
CASKIN1-203ENST00000564289 WBP1LQ9NX94 342 aa16.3■□□□□ 0.2
CASKIN1-203ENST00000564289 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
CASKIN1-203ENST00000564289 ALDH1B1P30837 517 aa16.29■□□□□ 0.2
CASKIN1-203ENST00000564289 EPHX2P34913 555 aa16.29■□□□□ 0.2
CASKIN1-203ENST00000564289 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
CASKIN1-203ENST00000564289 MCM10Q7L590 875 aa16.29■□□□□ 0.2
CASKIN1-203ENST00000564289 SYNE4Q8N205 404 aa16.29■□□□□ 0.2
CASKIN1-203ENST00000564289 HTATSF1O43719 755 aaKnown RBP16.28■□□□□ 0.2
CASKIN1-203ENST00000564289 HLFQ16534 295 aa16.28■□□□□ 0.2
CASKIN1-203ENST00000564289 PNMA8AQ86V59 439 aaPredicted RBP16.28■□□□□ 0.2
CASKIN1-203ENST00000564289 CNTROBQ8N137 903 aa16.28■□□□□ 0.2
CASKIN1-203ENST00000564289 RASSF10A6NK89 507 aa16.27■□□□□ 0.2
CASKIN1-203ENST00000564289 IARSP41252 1262 aaKnown RBP16.27■□□□□ 0.2
CASKIN1-203ENST00000564289 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
CASKIN1-203ENST00000564289 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
CASKIN1-203ENST00000564289 EAPPQ56P03 285 aaPredicted RBP16.27■□□□□ 0.2
CASKIN1-203ENST00000564289 GPC2Q8N158 579 aa16.27■□□□□ 0.2
CASKIN1-203ENST00000564289 RTF1Q92541 710 aaKnown RBP16.27■□□□□ 0.2
CASKIN1-203ENST00000564289 CFAP53Q96M91 514 aa16.27■□□□□ 0.2
CASKIN1-203ENST00000564289 PSMD1Q99460 953 aa16.27■□□□□ 0.2
CASKIN1-203ENST00000564289 SNED1Q8TER0 1413 aa16.27■□□□□ 0.19
CASKIN1-203ENST00000564289 SCN4AP35499 1836 aa16.26■□□□□ 0.19
CASKIN1-203ENST00000564289 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
CASKIN1-203ENST00000564289 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
CASKIN1-203ENST00000564289 NUDCQ9Y266 331 aa16.26■□□□□ 0.19
CASKIN1-203ENST00000564289 BCORQ6W2J9 1755 aa16.26■□□□□ 0.19
CASKIN1-203ENST00000564289 ARFGEF2Q9Y6D5 1785 aa16.26■□□□□ 0.19
CASKIN1-203ENST00000564289 HOXA10P31260 410 aaPredicted RBP16.25■□□□□ 0.19
CASKIN1-203ENST00000564289 TAF7Q15545 349 aaPredicted RBP16.25■□□□□ 0.19
CASKIN1-203ENST00000564289 DEFB115Q30KQ5 88 aa16.25■□□□□ 0.19
CASKIN1-203ENST00000564289 MAP1SQ66K74 1059 aaPredicted RBP16.25■□□□□ 0.19
CASKIN1-203ENST00000564289 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
CASKIN1-203ENST00000564289 AIDAQ96BJ3 306 aa16.25■□□□□ 0.19
CASKIN1-203ENST00000564289 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
CASKIN1-203ENST00000564289 FAM177BA6PVY3 158 aa16.24■□□□□ 0.19
CASKIN1-203ENST00000564289 ERVV-1B6SEH8 477 aa16.24■□□□□ 0.19
CASKIN1-203ENST00000564289 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
CASKIN1-203ENST00000564289 LBX1P52954 281 aa16.24■□□□□ 0.19
CASKIN1-203ENST00000564289 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
CASKIN1-203ENST00000564289 ADAMTSL1Q8N6G6 1762 aa16.23■□□□□ 0.19
CASKIN1-203ENST00000564289 JDP2Q8WYK2 163 aa16.23■□□□□ 0.19
CASKIN1-203ENST00000564289 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
CASKIN1-203ENST00000564289 GTF2E1P29083 439 aaPredicted RBP16.22■□□□□ 0.19
CASKIN1-203ENST00000564289 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
CASKIN1-203ENST00000564289 NYXQ9GZU5 481 aa16.22■□□□□ 0.19
CASKIN1-203ENST00000564289 WDR33Q9C0J8 1336 aaKnown RBP16.21■□□□□ 0.19
CASKIN1-203ENST00000564289 HSPA8P11142 646 aaKnown RBP16.21■□□□□ 0.19
CASKIN1-203ENST00000564289 GRIPAP1Q4V328 841 aa16.21■□□□□ 0.19
CASKIN1-203ENST00000564289 NUTM1Q86Y26 1132 aa16.21■□□□□ 0.19
CASKIN1-203ENST00000564289 DDX21Q9NR30 783 aaKnown RBP eCLIP16.21■□□□□ 0.19
CASKIN1-203ENST00000564289 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms