RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 DNAAF4Q8WXU2 420 aa14.1□□□□□ -0.15
ABCA3-203ENST00000563623 MYRIPQ8NFW9 859 aa14.09□□□□□ -0.15
ABCA3-203ENST00000563623 BICD2Q8TD16 824 aa14.09□□□□□ -0.15
ABCA3-203ENST00000563623 SSH3Q8TE77 659 aa14.09□□□□□ -0.15
ABCA3-203ENST00000563623 CCDC8Q9H0W5 538 aaPredicted RBP14.09□□□□□ -0.15
ABCA3-203ENST00000563623 SALL3Q9BXA9 1300 aa14.09□□□□□ -0.15
ABCA3-203ENST00000563623 FLT4P35916 1363 aa14.09□□□□□ -0.15
ABCA3-203ENST00000563623 CEBPZQ03701 1054 aaKnown RBP14.09□□□□□ -0.15
ABCA3-203ENST00000563623 TRIM5Q9C035 493 aa14.09□□□□□ -0.15
ABCA3-203ENST00000563623 LSG1Q9H089 658 aaKnown RBP14.09□□□□□ -0.15
ABCA3-203ENST00000563623 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.15
ABCA3-203ENST00000563623 HSP90B1P14625 803 aaKnown RBP14.08□□□□□ -0.15
ABCA3-203ENST00000563623 ZNF592Q92610 1267 aa14.08□□□□□ -0.15
ABCA3-203ENST00000563623 CLTCQ00610 1675 aaKnown RBP14.08□□□□□ -0.16
ABCA3-203ENST00000563623 KRT85P78386 507 aa14.08□□□□□ -0.16
ABCA3-203ENST00000563623 FSD1Q9BTV5 496 aa14.08□□□□□ -0.16
ABCA3-203ENST00000563623 NUP62CLQ9H1M0 184 aa14.08□□□□□ -0.16
ABCA3-203ENST00000563623 AMOTL2Q9Y2J4 779 aa14.08□□□□□ -0.16
ABCA3-203ENST00000563623 EID1Q9Y6B2 187 aa14.08□□□□□ -0.16
ABCA3-203ENST00000563623 PI4K2BQ8TCG2 481 aa14.08□□□□□ -0.16
ABCA3-203ENST00000563623 FBXW7Q969H0 707 aa14.08□□□□□ -0.16
ABCA3-203ENST00000563623 CEBPAP49715 358 aaPredicted RBP14.07□□□□□ -0.16
ABCA3-203ENST00000563623 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 TNMDQ9H2S6 317 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 BOLA2Q9H3K6 86 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 RPAP1Q9BWH6 1393 aaPredicted RBP14.07□□□□□ -0.16
ABCA3-203ENST00000563623 KCNQ3O43525 872 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 G3BP1Q13283 466 aaKnown RBP eCLIP14.07□□□□□ -0.16
ABCA3-203ENST00000563623 SSH2Q76I76 1423 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 PLEKHG3A1L390 1219 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 MAP3K11Q16584 847 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 MPRIPQ6WCQ1 1025 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 LUZP1Q86V48 1076 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 PRIMPOLQ96LW4 560 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 ECHDC1Q9NTX5 307 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 PYCARDQ9ULZ3 195 aa14.07□□□□□ -0.16
ABCA3-203ENST00000563623 LGR6Q9HBX8 967 aa14.06□□□□□ -0.16
ABCA3-203ENST00000563623 MTMR6Q9Y217 621 aa14.06□□□□□ -0.16
ABCA3-203ENST00000563623 RBM8AQ9Y5S9 174 aaKnown RBP14.06□□□□□ -0.16
ABCA3-203ENST00000563623 PTGS1P23219 599 aa14.06□□□□□ -0.16
ABCA3-203ENST00000563623 RBM33Q96EV2 1170 aaKnown RBP14.06□□□□□ -0.16
ABCA3-203ENST00000563623 ZSCAN31Q96LW9 406 aaPredicted RBP14.06□□□□□ -0.16
ABCA3-203ENST00000563623 ARHGEF10O15013 1369 aa14.06□□□□□ -0.16
ABCA3-203ENST00000563623 TCHHQ07283 1943 aa14.06□□□□□ -0.16
ABCA3-203ENST00000563623 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 FAM227BQ96M60 508 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 ME3Q16798 604 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 BLOC1S2Q6QNY1 142 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 SPATA32Q96LK8 384 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 HYPKQ9NX55 129 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 H3BQV1 296 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 CWF19L2Q2TBE0 894 aaKnown RBP14.05□□□□□ -0.16
ABCA3-203ENST00000563623 IFFO2Q5TF58 517 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 DDX11Q96FC9 970 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 TTC14Q96N46 770 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 SBNO1A3KN83 1393 aa14.05□□□□□ -0.16
ABCA3-203ENST00000563623 BTBD11A6QL63 1104 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 PPFIA3O75145 1194 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 HOXC9P31274 260 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
ABCA3-203ENST00000563623 C16orf45Q96MC5 204 aaPredicted RBP14.04□□□□□ -0.16
ABCA3-203ENST00000563623 CCDC94Q9BW85 323 aaPredicted RBP14.04□□□□□ -0.16
ABCA3-203ENST00000563623 DACT1Q9NYF0 836 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 AOX1Q06278 1338 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 USP6P35125 1406 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 LIG1P18858 919 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 CCDC186Q7Z3E2 898 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 PDCL2Q8N4E4 241 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 SH2B1Q9NRF2 756 aaPredicted RBP14.04□□□□□ -0.16
ABCA3-203ENST00000563623 MAP3K2Q9Y2U5 619 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 MAP3K5Q99683 1374 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 LTKP29376 864 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 CDC37L1Q7L3B6 337 aa14.04□□□□□ -0.16
ABCA3-203ENST00000563623 DLC1Q96QB1 1528 aa14.03□□□□□ -0.16
ABCA3-203ENST00000563623 RIOK3O14730 519 aaKnown RBP14.03□□□□□ -0.16
ABCA3-203ENST00000563623 IGSF3O75054 1194 aa14.03□□□□□ -0.16
ABCA3-203ENST00000563623 NMIQ13287 307 aaPredicted RBP14.03□□□□□ -0.16
ABCA3-203ENST00000563623 TTC6Q86TZ1 520 aa14.03□□□□□ -0.16
ABCA3-203ENST00000563623 IGSF1Q8N6C5 1336 aa14.03□□□□□ -0.16
ABCA3-203ENST00000563623 PSMA5P28066 241 aa14.03□□□□□ -0.16
ABCA3-203ENST00000563623 TYRO3Q06418 890 aa14.03□□□□□ -0.16
ABCA3-203ENST00000563623 ANO6Q4KMQ2 910 aa14.03□□□□□ -0.16
ABCA3-203ENST00000563623 RNF20Q5VTR2 975 aa14.03□□□□□ -0.16
ABCA3-203ENST00000563623 CREB3L3Q68CJ9 461 aa14.03□□□□□ -0.16
ABCA3-203ENST00000563623 HTATSF1O43719 755 aaKnown RBP14.02□□□□□ -0.16
ABCA3-203ENST00000563623 GTF2E1P29083 439 aaPredicted RBP14.02□□□□□ -0.16
ABCA3-203ENST00000563623 VPS53Q5VIR6 699 aa14.02□□□□□ -0.16
ABCA3-203ENST00000563623 BCL2L12Q9HB09 334 aa14.02□□□□□ -0.16
ABCA3-203ENST00000563623 TPCN1Q9ULQ1 816 aa14.02□□□□□ -0.16
ABCA3-203ENST00000563623 TTC21AQ8NDW8 1320 aa14.02□□□□□ -0.16
ABCA3-203ENST00000563623 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.17
ABCA3-203ENST00000563623 PDCP20941 246 aa14.02□□□□□ -0.17
ABCA3-203ENST00000563623 TMEM87AQ8NBN3 555 aa14.02□□□□□ -0.17
ABCA3-203ENST00000563623 GOLGA6L19H0YKK7 550 aa14.01□□□□□ -0.17
ABCA3-203ENST00000563623 AP5Z1O43299 807 aa14.01□□□□□ -0.17
ABCA3-203ENST00000563623 LRMPQ12912 555 aa14.01□□□□□ -0.17
ABCA3-203ENST00000563623 KLHDC4Q8TBB5 520 aa14.01□□□□□ -0.17
ABCA3-203ENST00000563623 FAM200AQ8TCP9 573 aa14.01□□□□□ -0.17
ABCA3-203ENST00000563623 CCDC171Q6TFL3 1326 aa14.01□□□□□ -0.17
ABCA3-203ENST00000563623 POLA2Q14181 598 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms