RNA–Protein interactions for RNA: ENST00000561838.1

ITGAM-203, Transcript of integrin subunit alpha M, humanhuman

TSL 4

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-203ENST00000561838 ARFGEF2Q9Y6D5 1785 aa17.5■□□□□ 0.39
ITGAM-203ENST00000561838 PASKQ96RG2 1323 aa17.49■□□□□ 0.39
ITGAM-203ENST00000561838 CAMTA2O94983 1202 aa17.49■□□□□ 0.39
ITGAM-203ENST00000561838 CTCFP49711 727 aaPredicted RBP17.49■□□□□ 0.39
ITGAM-203ENST00000561838 CCDC93Q567U6 631 aa17.49■□□□□ 0.39
ITGAM-203ENST00000561838 ZNF652Q9Y2D9 606 aa17.49■□□□□ 0.39
ITGAM-203ENST00000561838 ZNF330Q9Y3S2 320 aaPredicted RBP17.49■□□□□ 0.39
ITGAM-203ENST00000561838 COL11A2P13942 1736 aaPredicted RBP17.49■□□□□ 0.39
ITGAM-203ENST00000561838 TMEM88BA6NKF7 163 aa17.48■□□□□ 0.39
ITGAM-203ENST00000561838 IL17REQ8NFR9 667 aa17.48■□□□□ 0.39
ITGAM-203ENST00000561838 TAF1DQ9H5J8 278 aaPredicted RBP17.48■□□□□ 0.39
ITGAM-203ENST00000561838 SLX4Q8IY92 1834 aa17.47■□□□□ 0.39
ITGAM-203ENST00000561838 NPR1P16066 1061 aa17.47■□□□□ 0.39
ITGAM-203ENST00000561838 PNMA8AQ86V59 439 aaPredicted RBP17.47■□□□□ 0.39
ITGAM-203ENST00000561838 DZIP3Q86Y13 1208 aaKnown RBP17.47■□□□□ 0.39
ITGAM-203ENST00000561838 RTKN2Q8IZC4 609 aa17.47■□□□□ 0.39
ITGAM-203ENST00000561838 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
ITGAM-203ENST00000561838 FKBP4Q02790 459 aaKnown RBP eCLIP17.46■□□□□ 0.39
ITGAM-203ENST00000561838 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
ITGAM-203ENST00000561838 C7orf43Q8WVR3 580 aa17.46■□□□□ 0.39
ITGAM-203ENST00000561838 KLRG2A4D1S0 409 aaPredicted RBP17.45■□□□□ 0.38
ITGAM-203ENST00000561838 FOXN1O15353 648 aa17.45■□□□□ 0.38
ITGAM-203ENST00000561838 A1BGP04217 495 aa17.45■□□□□ 0.38
ITGAM-203ENST00000561838 TPTE2Q6XPS3 522 aa17.45■□□□□ 0.38
ITGAM-203ENST00000561838 HACL1Q9UJ83 578 aa17.45■□□□□ 0.38
ITGAM-203ENST00000561838 CEMIPQ8WUJ3 1361 aa17.44■□□□□ 0.38
ITGAM-203ENST00000561838 BTBD11A6QL63 1104 aa17.44■□□□□ 0.38
ITGAM-203ENST00000561838 ITGBL1O95965 494 aaPredicted RBP17.44■□□□□ 0.38
ITGAM-203ENST00000561838 POTEIP0CG38 1075 aa17.44■□□□□ 0.38
ITGAM-203ENST00000561838 POTEJP0CG39 1038 aa17.44■□□□□ 0.38
ITGAM-203ENST00000561838 ALDH1B1P30837 517 aa17.44■□□□□ 0.38
ITGAM-203ENST00000561838 CCDC24Q8N4L8 307 aa17.44■□□□□ 0.38
ITGAM-203ENST00000561838 BCORQ6W2J9 1755 aa17.43■□□□□ 0.38
ITGAM-203ENST00000561838 NPC1L1Q9UHC9 1359 aa17.43■□□□□ 0.38
ITGAM-203ENST00000561838 PER1O15534 1290 aaPredicted RBP17.43■□□□□ 0.38
ITGAM-203ENST00000561838 VEGFBP49765 207 aa17.43■□□□□ 0.38
ITGAM-203ENST00000561838 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
ITGAM-203ENST00000561838 WBP1LQ9NX94 342 aa17.43■□□□□ 0.38
ITGAM-203ENST00000561838 CACNA1SQ13698 1873 aa17.42■□□□□ 0.38
ITGAM-203ENST00000561838 U2SURPO15042 1029 aaKnown RBP17.42■□□□□ 0.38
ITGAM-203ENST00000561838 CLEC11AQ9Y240 323 aa17.42■□□□□ 0.38
ITGAM-203ENST00000561838 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
ITGAM-203ENST00000561838 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
ITGAM-203ENST00000561838 EPHX2P34913 555 aa17.41■□□□□ 0.38
ITGAM-203ENST00000561838 MAP2K1Q02750 393 aaPredicted RBP17.41■□□□□ 0.38
ITGAM-203ENST00000561838 GRIPAP1Q4V328 841 aa17.41■□□□□ 0.38
ITGAM-203ENST00000561838 EAPPQ56P03 285 aaPredicted RBP17.41■□□□□ 0.38
ITGAM-203ENST00000561838 FZD9O00144 591 aa17.4■□□□□ 0.38
ITGAM-203ENST00000561838 DEFB115Q30KQ5 88 aa17.4■□□□□ 0.38
ITGAM-203ENST00000561838 CC2D2BQ6DHV5 1058 aa17.4■□□□□ 0.38
ITGAM-203ENST00000561838 GPC2Q8N158 579 aa17.4■□□□□ 0.38
ITGAM-203ENST00000561838 KIF7Q2M1P5 1343 aa17.4■□□□□ 0.38
ITGAM-203ENST00000561838 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
ITGAM-203ENST00000561838 CC2D1BQ5T0F9 858 aaKnown RBP17.39■□□□□ 0.37
ITGAM-203ENST00000561838 CNTROBQ8N137 903 aa17.39■□□□□ 0.37
ITGAM-203ENST00000561838 JDP2Q8WYK2 163 aa17.39■□□□□ 0.37
ITGAM-203ENST00000561838 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
ITGAM-203ENST00000561838 IARSP41252 1262 aaKnown RBP17.38■□□□□ 0.37
ITGAM-203ENST00000561838 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
ITGAM-203ENST00000561838 PSMD1Q99460 953 aa17.38■□□□□ 0.37
ITGAM-203ENST00000561838 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
ITGAM-203ENST00000561838 NIP7Q9Y221 180 aaKnown RBP eCLIP17.38■□□□□ 0.37
ITGAM-203ENST00000561838 ADAMTSL1Q8N6G6 1762 aa17.38■□□□□ 0.37
ITGAM-203ENST00000561838 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
ITGAM-203ENST00000561838 NUDCQ9Y266 331 aa17.37■□□□□ 0.37
ITGAM-203ENST00000561838 ZNF541Q9H0D2 1346 aa17.37■□□□□ 0.37
ITGAM-203ENST00000561838 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
ITGAM-203ENST00000561838 GTF2E1P29083 439 aaPredicted RBP17.36■□□□□ 0.37
ITGAM-203ENST00000561838 LBX1P52954 281 aa17.36■□□□□ 0.37
ITGAM-203ENST00000561838 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
ITGAM-203ENST00000561838 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
ITGAM-203ENST00000561838 KCNQ3O43525 872 aa17.35■□□□□ 0.37
ITGAM-203ENST00000561838 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
ITGAM-203ENST00000561838 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
ITGAM-203ENST00000561838 WDR33Q9C0J8 1336 aaKnown RBP17.35■□□□□ 0.37
ITGAM-203ENST00000561838 PRKAR2BP31323 418 aa17.34■□□□□ 0.37
ITGAM-203ENST00000561838 ECE1P42892 770 aa17.34■□□□□ 0.37
ITGAM-203ENST00000561838 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
ITGAM-203ENST00000561838 BEGAINQ9BUH8 593 aa17.34■□□□□ 0.37
ITGAM-203ENST00000561838 ABT1Q9ULW3 272 aaKnown RBP17.34■□□□□ 0.37
ITGAM-203ENST00000561838 HSPA8P11142 646 aaKnown RBP17.33■□□□□ 0.36
ITGAM-203ENST00000561838 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.36
ITGAM-203ENST00000561838 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.36
ITGAM-203ENST00000561838 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
ITGAM-203ENST00000561838 ERVV-1B6SEH8 477 aa17.32■□□□□ 0.36
ITGAM-203ENST00000561838 CRY2Q49AN0 593 aa17.32■□□□□ 0.36
ITGAM-203ENST00000561838 ABHD8Q96I13 439 aa17.32■□□□□ 0.36
ITGAM-203ENST00000561838 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
ITGAM-203ENST00000561838 USP50Q70EL3 339 aaPredicted RBP17.31■□□□□ 0.36
ITGAM-203ENST00000561838 VPS33BQ9H267 617 aa17.31■□□□□ 0.36
ITGAM-203ENST00000561838 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
ITGAM-203ENST00000561838 NBPF26B4DH59 902 aa17.3■□□□□ 0.36
ITGAM-203ENST00000561838 HOXA10P31260 410 aaPredicted RBP17.3■□□□□ 0.36
ITGAM-203ENST00000561838 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
ITGAM-203ENST00000561838 NBPF10Q6P3W6 841 aaKnown RBP17.3■□□□□ 0.36
ITGAM-203ENST00000561838 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
ITGAM-203ENST00000561838 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
ITGAM-203ENST00000561838 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
ITGAM-203ENST00000561838 SLC34A2O95436 690 aa17.29■□□□□ 0.36
ITGAM-203ENST00000561838 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms