RNA–Protein interactions for RNA: ENST00000561410.5

AP3S2-215, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-215ENST00000561410 NBPF7P0C2Y1 421 aaPredicted RBP17.15■□□□□ 0.34
AP3S2-215ENST00000561410 CYP19A1P11511 503 aaPredicted RBP17.15■□□□□ 0.34
AP3S2-215ENST00000561410 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
AP3S2-215ENST00000561410 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.33
AP3S2-215ENST00000561410 PDE4AP27815 886 aa17.14■□□□□ 0.33
AP3S2-215ENST00000561410 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
AP3S2-215ENST00000561410 GCKRQ14397 625 aa17.14■□□□□ 0.33
AP3S2-215ENST00000561410 TTLL7Q6ZT98 887 aa17.14■□□□□ 0.33
AP3S2-215ENST00000561410 SEPT12Q8IYM1 358 aa17.14■□□□□ 0.33
AP3S2-215ENST00000561410 ARXQ96QS3 562 aa17.14■□□□□ 0.33
AP3S2-215ENST00000561410 LOC102724428A0A0B4J2F2 783 aa17.13■□□□□ 0.33
AP3S2-215ENST00000561410 KCNQ2O43526 872 aa17.13■□□□□ 0.33
AP3S2-215ENST00000561410 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
AP3S2-215ENST00000561410 SIK1P57059 783 aa17.13■□□□□ 0.33
AP3S2-215ENST00000561410 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
AP3S2-215ENST00000561410 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
AP3S2-215ENST00000561410 ZBTB3Q9H5J0 574 aa17.13■□□□□ 0.33
AP3S2-215ENST00000561410 UTYO14607 1347 aa17.12■□□□□ 0.33
AP3S2-215ENST00000561410 ATP5J2-PTCD1G3V325 749 aa17.11■□□□□ 0.33
AP3S2-215ENST00000561410 APBB1O00213 710 aa17.11■□□□□ 0.33
AP3S2-215ENST00000561410 SRGAP3O43295 1099 aa17.11■□□□□ 0.33
AP3S2-215ENST00000561410 ZNF772Q68DY9 489 aaPredicted RBP17.11■□□□□ 0.33
AP3S2-215ENST00000561410 PPP1R42Q7Z4L9 355 aa17.11■□□□□ 0.33
AP3S2-215ENST00000561410 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
AP3S2-215ENST00000561410 RBM19Q9Y4C8 960 aaKnown RBP17.11■□□□□ 0.33
AP3S2-215ENST00000561410 PNMA6EA0A0J9YXQ4 647 aa17.1■□□□□ 0.33
AP3S2-215ENST00000561410 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
AP3S2-215ENST00000561410 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
AP3S2-215ENST00000561410 BACH2Q9BYV9 841 aa17.1■□□□□ 0.33
AP3S2-215ENST00000561410 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
AP3S2-215ENST00000561410 A0A087WZG4 1122 aa17.09■□□□□ 0.33
AP3S2-215ENST00000561410 HSP90AB4PQ58FF6 505 aa17.09■□□□□ 0.33
AP3S2-215ENST00000561410 SUCLG2Q96I99 432 aa17.09■□□□□ 0.33
AP3S2-215ENST00000561410 ZBTB1Q9Y2K1 713 aa17.09■□□□□ 0.33
AP3S2-215ENST00000561410 MAP3K15Q6ZN16 1313 aa17.08■□□□□ 0.32
AP3S2-215ENST00000561410 RAB11FIP3O75154 756 aa17.08■□□□□ 0.32
AP3S2-215ENST00000561410 CRKLP46109 303 aaKnown RBP17.08■□□□□ 0.32
AP3S2-215ENST00000561410 MTX1Q13505 466 aa17.08■□□□□ 0.32
AP3S2-215ENST00000561410 POLA2Q14181 598 aa17.08■□□□□ 0.32
AP3S2-215ENST00000561410 HSP90AB3PQ58FF7 597 aa17.08■□□□□ 0.32
AP3S2-215ENST00000561410 CCDC191Q8NCU4 936 aa17.08■□□□□ 0.32
AP3S2-215ENST00000561410 BCL11AQ9H165 835 aa17.08■□□□□ 0.32
AP3S2-215ENST00000561410 EXOC6BQ9Y2D4 811 aa17.08■□□□□ 0.32
AP3S2-215ENST00000561410 SURF6O75683 361 aaKnown RBP17.07■□□□□ 0.32
AP3S2-215ENST00000561410 TCIRG1Q13488 830 aa17.07■□□□□ 0.32
AP3S2-215ENST00000561410 FAM182BQ5T319 152 aa17.07■□□□□ 0.32
AP3S2-215ENST00000561410 UBE3BQ7Z3V4 1068 aa17.07■□□□□ 0.32
AP3S2-215ENST00000561410 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
AP3S2-215ENST00000561410 ARFGEF2Q9Y6D5 1785 aa17.07■□□□□ 0.32
AP3S2-215ENST00000561410 TJP1Q07157 1748 aa17.07■□□□□ 0.32
AP3S2-215ENST00000561410 OS9Q13438 667 aaPredicted RBP17.06■□□□□ 0.32
AP3S2-215ENST00000561410 ITPK1Q13572 414 aa17.06■□□□□ 0.32
AP3S2-215ENST00000561410 INTS5Q6P9B9 1019 aaKnown RBP17.06■□□□□ 0.32
AP3S2-215ENST00000561410 DZIP3Q86Y13 1208 aaKnown RBP17.06■□□□□ 0.32
AP3S2-215ENST00000561410 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
AP3S2-215ENST00000561410 KAT6BQ8WYB5 2073 aa17.05■□□□□ 0.32
AP3S2-215ENST00000561410 ERVV-1B6SEH8 477 aa17.05■□□□□ 0.32
AP3S2-215ENST00000561410 RBM6P78332 1123 aaKnown RBP17.05■□□□□ 0.32
AP3S2-215ENST00000561410 KRT27Q7Z3Y8 459 aa17.05■□□□□ 0.32
AP3S2-215ENST00000561410 ISCA1Q9BUE6 129 aa17.05■□□□□ 0.32
AP3S2-215ENST00000561410 H7C1W4 665 aa17.04■□□□□ 0.32
AP3S2-215ENST00000561410 SMARCA5O60264 1052 aaPredicted RBP17.04■□□□□ 0.32
AP3S2-215ENST00000561410 GIGYF2Q6Y7W6 1299 aaKnown RBP17.04■□□□□ 0.32
AP3S2-215ENST00000561410 FAM196AQ6ZSG2 479 aa17.04■□□□□ 0.32
AP3S2-215ENST00000561410 NHSQ6T4R5 1651 aa17.04■□□□□ 0.32
AP3S2-215ENST00000561410 COL15A1P39059 1388 aa17.03■□□□□ 0.32
AP3S2-215ENST00000561410 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
AP3S2-215ENST00000561410 TRIM28Q13263 835 aaKnown RBP17.03■□□□□ 0.32
AP3S2-215ENST00000561410 C8orf34Q49A92 452 aa17.03■□□□□ 0.32
AP3S2-215ENST00000561410 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
AP3S2-215ENST00000561410 BCL11BQ9C0K0 894 aaPredicted RBP17.03■□□□□ 0.32
AP3S2-215ENST00000561410 TBC1D2BQ9UPU7 963 aa17.03■□□□□ 0.32
AP3S2-215ENST00000561410 NUP188Q5SRE5 1749 aa17.03■□□□□ 0.32
AP3S2-215ENST00000561410 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
AP3S2-215ENST00000561410 JARID2Q92833 1246 aaPredicted RBP17.02■□□□□ 0.32
AP3S2-215ENST00000561410 KIF1BPQ96EK5 621 aa17.02■□□□□ 0.32
AP3S2-215ENST00000561410 KAZALD1Q96I82 304 aa17.02■□□□□ 0.32
AP3S2-215ENST00000561410 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
AP3S2-215ENST00000561410 G3BP1Q13283 466 aaKnown RBP eCLIP17.01■□□□□ 0.31
AP3S2-215ENST00000561410 BMP2KLQ5H9B9 411 aa17.01■□□□□ 0.31
AP3S2-215ENST00000561410 PTF1AQ7RTS3 328 aa17.01■□□□□ 0.31
AP3S2-215ENST00000561410 PLEKHM2Q8IWE5 1019 aa17.01■□□□□ 0.31
AP3S2-215ENST00000561410 LINC00116Q8NCU8 138 aa17.01■□□□□ 0.31
AP3S2-215ENST00000561410 NOP58Q9Y2X3 529 aaKnown RBP17.01■□□□□ 0.31
AP3S2-215ENST00000561410 CNTNAP4Q9C0A0 1308 aa17■□□□□ 0.31
AP3S2-215ENST00000561410 CASP7P55210 303 aa17■□□□□ 0.31
AP3S2-215ENST00000561410 HLFQ16534 295 aa17■□□□□ 0.31
AP3S2-215ENST00000561410 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
AP3S2-215ENST00000561410 ZNF652Q9Y2D9 606 aa17■□□□□ 0.31
AP3S2-215ENST00000561410 AFDNP55196 1824 aaKnown RBP17■□□□□ 0.31
AP3S2-215ENST00000561410 ZNF831Q5JPB2 1677 aa17■□□□□ 0.31
AP3S2-215ENST00000561410 PCCAP05165 728 aaPredicted RBP16.99■□□□□ 0.31
AP3S2-215ENST00000561410 GPTP24298 496 aa16.99■□□□□ 0.31
AP3S2-215ENST00000561410 RABL6Q3YEC7 729 aaPredicted RBP16.99■□□□□ 0.31
AP3S2-215ENST00000561410 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
AP3S2-215ENST00000561410 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
AP3S2-215ENST00000561410 RC3H1Q5TC82 1133 aaKnown RBP16.99■□□□□ 0.31
AP3S2-215ENST00000561410 ZBTB38Q8NAP3 1195 aaPredicted RBP16.99■□□□□ 0.31
AP3S2-215ENST00000561410 RHPN1Q8TCX5 695 aa16.99■□□□□ 0.31
AP3S2-215ENST00000561410 FBXO41Q8TF61 875 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms