RNA–Protein interactions for RNA: ENST00000561095.1

TICRR-203, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

TSL 1 (best)

Gene TICRR, Length 2,367 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-203ENST00000561095 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
TICRR-203ENST00000561095 NPATQ14207 1427 aa17.28■□□□□ 0.36
TICRR-203ENST00000561095 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
TICRR-203ENST00000561095 MRFAP1L1Q96HT8 127 aa17.28■□□□□ 0.36
TICRR-203ENST00000561095 LSG1Q9H089 658 aaKnown RBP17.28■□□□□ 0.36
TICRR-203ENST00000561095 CLSTN2Q9H4D0 955 aa17.28■□□□□ 0.36
TICRR-203ENST00000561095 DDX19AQ9NUU7 478 aaKnown RBP17.28■□□□□ 0.36
TICRR-203ENST00000561095 TTC21BQ7Z4L5 1316 aa17.27■□□□□ 0.36
TICRR-203ENST00000561095 SGSM2O43147 1006 aa17.27■□□□□ 0.36
TICRR-203ENST00000561095 ST3GAL1Q11201 340 aa17.27■□□□□ 0.36
TICRR-203ENST00000561095 ERCC6LQ2NKX8 1250 aa17.27■□□□□ 0.36
TICRR-203ENST00000561095 PAXIP1Q6ZW49 1069 aaPredicted RBP17.27■□□□□ 0.36
TICRR-203ENST00000561095 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
TICRR-203ENST00000561095 ZRANB2O95218 330 aaKnown RBP eCLIP17.26■□□□□ 0.35
TICRR-203ENST00000561095 DNAJC25Q9H1X3 360 aa17.26■□□□□ 0.35
TICRR-203ENST00000561095 NEXMIFQ5QGS0 1516 aa17.26■□□□□ 0.35
TICRR-203ENST00000561095 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
TICRR-203ENST00000561095 KIF2AO00139 706 aaPredicted RBP17.26■□□□□ 0.35
TICRR-203ENST00000561095 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
TICRR-203ENST00000561095 CAVIN2O95810 425 aa17.26■□□□□ 0.35
TICRR-203ENST00000561095 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
TICRR-203ENST00000561095 DTNBO60941 627 aa17.25■□□□□ 0.35
TICRR-203ENST00000561095 GNAI2P04899 355 aa17.25■□□□□ 0.35
TICRR-203ENST00000561095 IQCB1Q15051 598 aa17.25■□□□□ 0.35
TICRR-203ENST00000561095 CCDC93Q567U6 631 aa17.25■□□□□ 0.35
TICRR-203ENST00000561095 CERS3Q8IU89 383 aa17.25■□□□□ 0.35
TICRR-203ENST00000561095 PTPRMP28827 1452 aa17.25■□□□□ 0.35
TICRR-203ENST00000561095 PIK3C2BO00750 1634 aa17.25■□□□□ 0.35
TICRR-203ENST00000561095 CHL1O00533 1208 aa17.25■□□□□ 0.35
TICRR-203ENST00000561095 CCT4P50991 539 aaKnown RBP17.25■□□□□ 0.35
TICRR-203ENST00000561095 SETD1AO15047 1707 aaKnown RBP17.24■□□□□ 0.35
TICRR-203ENST00000561095 CCDC69A6NI79 296 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 NPHP1O15259 732 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 CPA1P15085 419 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 TXLNBQ8N3L3 684 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 RGS22Q8NE09 1264 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 UBXN6Q9BZV1 441 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 SH2B1Q9NRF2 756 aaPredicted RBP17.24■□□□□ 0.35
TICRR-203ENST00000561095 TRMT1Q9NXH9 659 aaKnown RBP17.24■□□□□ 0.35
TICRR-203ENST00000561095 NPHP3Q7Z494 1330 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 PNMA6EA0A0J9YXQ4 647 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 LRRN4CLQ8ND94 238 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 NEK11Q8NG66 645 aa17.24■□□□□ 0.35
TICRR-203ENST00000561095 ZSCAN31Q96LW9 406 aaPredicted RBP17.24■□□□□ 0.35
TICRR-203ENST00000561095 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
TICRR-203ENST00000561095 VPS53Q5VIR6 699 aa17.23■□□□□ 0.35
TICRR-203ENST00000561095 EMILIN1Q9Y6C2 1016 aa17.23■□□□□ 0.35
TICRR-203ENST00000561095 CHD2O14647 1828 aaKnown RBP17.23■□□□□ 0.35
TICRR-203ENST00000561095 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
TICRR-203ENST00000561095 NOP2P46087 812 aaKnown RBP17.23■□□□□ 0.35
TICRR-203ENST00000561095 TEX35Q5T0J7 233 aa17.23■□□□□ 0.35
TICRR-203ENST00000561095 FAM173BQ6P4H8 233 aa17.23■□□□□ 0.35
TICRR-203ENST00000561095 CDC37L1Q7L3B6 337 aa17.23■□□□□ 0.35
TICRR-203ENST00000561095 RASSF4Q9H2L5 321 aa17.23■□□□□ 0.35
TICRR-203ENST00000561095 YY1AP1Q9H869 796 aa17.23■□□□□ 0.35
TICRR-203ENST00000561095 RSPH14Q9UHP6 348 aa17.23■□□□□ 0.35
TICRR-203ENST00000561095 ATP8B2P98198 1209 aa17.22■□□□□ 0.35
TICRR-203ENST00000561095 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
TICRR-203ENST00000561095 SYT10Q6XYQ8 523 aa17.22■□□□□ 0.35
TICRR-203ENST00000561095 SCAND2PQ9GZW5 306 aaPredicted RBP17.22■□□□□ 0.35
TICRR-203ENST00000561095 MINK1Q8N4C8 1332 aaPredicted RBP17.22■□□□□ 0.35
TICRR-203ENST00000561095 F6X3S4 739 aa17.22■□□□□ 0.35
TICRR-203ENST00000561095 NR1I2O75469 434 aa17.22■□□□□ 0.35
TICRR-203ENST00000561095 ADGRL3Q9HAR2 1447 aa17.22■□□□□ 0.35
TICRR-203ENST00000561095 CHRM1P11229 460 aaPredicted RBP17.21■□□□□ 0.35
TICRR-203ENST00000561095 TPM4P67936 248 aa17.21■□□□□ 0.35
TICRR-203ENST00000561095 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
TICRR-203ENST00000561095 USP16Q9Y5T5 823 aa17.21■□□□□ 0.35
TICRR-203ENST00000561095 ME3Q16798 604 aa17.21■□□□□ 0.34
TICRR-203ENST00000561095 LARP1BQ659C4 914 aaKnown RBP17.21■□□□□ 0.34
TICRR-203ENST00000561095 SLC4A10Q6U841 1118 aa17.21■□□□□ 0.34
TICRR-203ENST00000561095 G2E3Q7L622 706 aa17.21■□□□□ 0.34
TICRR-203ENST00000561095 KIDINS220Q9ULH0 1771 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 CRYBG1Q9Y4K1 1723 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 HECW2Q9P2P5 1572 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 ARHGAP29Q52LW3 1261 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 LEO1Q8WVC0 666 aaPredicted RBP17.2■□□□□ 0.34
TICRR-203ENST00000561095 PDRG1Q9NUG6 133 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 STK26Q9P289 416 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 ERCC6L2Q5T890 1561 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 ST5P78524 1137 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 SNW1Q13573 536 aaKnown RBP17.2■□□□□ 0.34
TICRR-203ENST00000561095 KRBA2Q6ZNG9 492 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 TEX2Q8IWB9 1127 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
TICRR-203ENST00000561095 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 SPATA32Q96LK8 384 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
TICRR-203ENST00000561095 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.2■□□□□ 0.34
TICRR-203ENST00000561095 GOLGA6L4A6NEF3 574 aa17.19■□□□□ 0.34
TICRR-203ENST00000561095 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
TICRR-203ENST00000561095 E4F1Q66K89 784 aaPredicted RBP17.19■□□□□ 0.34
TICRR-203ENST00000561095 FILIP1Q7Z7B0 1213 aa17.19■□□□□ 0.34
TICRR-203ENST00000561095 SMARCE1Q969G3 411 aa17.19■□□□□ 0.34
TICRR-203ENST00000561095 PGBD1Q96JS3 809 aa17.19■□□□□ 0.34
TICRR-203ENST00000561095 TM6SF1Q9BZW5 370 aa17.19■□□□□ 0.34
TICRR-203ENST00000561095 ATG3Q9NT62 314 aa17.19■□□□□ 0.34
TICRR-203ENST00000561095 TNNT3P45378 269 aaPredicted RBP17.18■□□□□ 0.34
TICRR-203ENST00000561095 ADCK5Q3MIX3 580 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms