RNA–Protein interactions for RNA: ENST00000561009.5

IRF9-212, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-212ENST00000561009 EAPPQ56P03 285 aaPredicted RBP15.58■□□□□ 0.08
IRF9-212ENST00000561009 IL17REQ8NFR9 667 aa15.58■□□□□ 0.08
IRF9-212ENST00000561009 CNTNAP1P78357 1384 aa15.58■□□□□ 0.08
IRF9-212ENST00000561009 TMEM88BA6NKF7 163 aa15.57■□□□□ 0.08
IRF9-212ENST00000561009 NPR1P16066 1061 aa15.57■□□□□ 0.08
IRF9-212ENST00000561009 CTCFP49711 727 aaPredicted RBP15.57■□□□□ 0.08
IRF9-212ENST00000561009 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
IRF9-212ENST00000561009 PRDM10Q9NQV6 1147 aa15.57■□□□□ 0.08
IRF9-212ENST00000561009 SCN7AQ01118 1682 aa15.57■□□□□ 0.08
IRF9-212ENST00000561009 PCNTO95613 3336 aa15.56■□□□□ 0.08
IRF9-212ENST00000561009 FOXN1O15353 648 aa15.56■□□□□ 0.08
IRF9-212ENST00000561009 FKBP4Q02790 459 aaKnown RBP eCLIP15.56■□□□□ 0.08
IRF9-212ENST00000561009 CLEC4GQ6UXB4 293 aa15.56■□□□□ 0.08
IRF9-212ENST00000561009 TPTE2Q6XPS3 522 aa15.56■□□□□ 0.08
IRF9-212ENST00000561009 L3MBTL3Q96JM7 780 aaPredicted RBP15.56■□□□□ 0.08
IRF9-212ENST00000561009 HACL1Q9UJ83 578 aa15.56■□□□□ 0.08
IRF9-212ENST00000561009 UBR2Q8IWV8 1755 aa15.55■□□□□ 0.08
IRF9-212ENST00000561009 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
IRF9-212ENST00000561009 GTF2E1P29083 439 aaPredicted RBP15.55■□□□□ 0.08
IRF9-212ENST00000561009 CNGB1Q14028 1251 aaPredicted RBP15.55■□□□□ 0.08
IRF9-212ENST00000561009 PNMA8AQ86V59 439 aaPredicted RBP15.55■□□□□ 0.08
IRF9-212ENST00000561009 RTKN2Q8IZC4 609 aa15.55■□□□□ 0.08
IRF9-212ENST00000561009 PASKQ96RG2 1323 aa15.54■□□□□ 0.08
IRF9-212ENST00000561009 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
IRF9-212ENST00000561009 RTF1Q92541 710 aaKnown RBP15.54■□□□□ 0.08
IRF9-212ENST00000561009 CFAP53Q96M91 514 aa15.54■□□□□ 0.08
IRF9-212ENST00000561009 ALDH1B1P30837 517 aa15.53■□□□□ 0.08
IRF9-212ENST00000561009 EPHX2P34913 555 aa15.53■□□□□ 0.08
IRF9-212ENST00000561009 VEGFBP49765 207 aa15.53■□□□□ 0.08
IRF9-212ENST00000561009 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
IRF9-212ENST00000561009 NIP7Q9Y221 180 aaKnown RBP eCLIP15.53■□□□□ 0.08
IRF9-212ENST00000561009 COL11A2P13942 1736 aaPredicted RBP15.52■□□□□ 0.08
IRF9-212ENST00000561009 SNRPA1P09661 255 aaKnown RBP15.52■□□□□ 0.08
IRF9-212ENST00000561009 JDP2Q8WYK2 163 aa15.52■□□□□ 0.08
IRF9-212ENST00000561009 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
IRF9-212ENST00000561009 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
IRF9-212ENST00000561009 ANKRD31Q8N7Z5 1873 aa15.52■□□□□ 0.07
IRF9-212ENST00000561009 CEMIPQ8WUJ3 1361 aa15.51■□□□□ 0.07
IRF9-212ENST00000561009 FER1L6Q2WGJ9 1857 aa15.51■□□□□ 0.07
IRF9-212ENST00000561009 FAM177BA6PVY3 158 aa15.51■□□□□ 0.07
IRF9-212ENST00000561009 PER1O15534 1290 aaPredicted RBP15.51■□□□□ 0.07
IRF9-212ENST00000561009 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
IRF9-212ENST00000561009 PIP4K2AP48426 406 aaPredicted RBP15.51■□□□□ 0.07
IRF9-212ENST00000561009 DEFB115Q30KQ5 88 aa15.51■□□□□ 0.07
IRF9-212ENST00000561009 ZNF541Q9H0D2 1346 aa15.5■□□□□ 0.07
IRF9-212ENST00000561009 RGL2O15211 777 aa15.5■□□□□ 0.07
IRF9-212ENST00000561009 KCNQ3O43525 872 aa15.5■□□□□ 0.07
IRF9-212ENST00000561009 ITGBL1O95965 494 aaPredicted RBP15.5■□□□□ 0.07
IRF9-212ENST00000561009 IARSP41252 1262 aaKnown RBP15.5■□□□□ 0.07
IRF9-212ENST00000561009 MAP2K1Q02750 393 aaPredicted RBP15.5■□□□□ 0.07
IRF9-212ENST00000561009 CNTROBQ8N137 903 aa15.5■□□□□ 0.07
IRF9-212ENST00000561009 C7orf43Q8WVR3 580 aa15.5■□□□□ 0.07
IRF9-212ENST00000561009 ABT1Q9ULW3 272 aaKnown RBP15.5■□□□□ 0.07
IRF9-212ENST00000561009 CCDC88AQ3V6T2 1871 aa15.5■□□□□ 0.07
IRF9-212ENST00000561009 RNF123Q5XPI4 1314 aa15.49■□□□□ 0.07
IRF9-212ENST00000561009 LMOD1P29536 600 aaPredicted RBP15.49■□□□□ 0.07
IRF9-212ENST00000561009 LBX1P52954 281 aa15.49■□□□□ 0.07
IRF9-212ENST00000561009 EIF6P56537 245 aaKnown RBP15.49■□□□□ 0.07
IRF9-212ENST00000561009 GPC2Q8N158 579 aa15.49■□□□□ 0.07
IRF9-212ENST00000561009 BEGAINQ9BUH8 593 aa15.49■□□□□ 0.07
IRF9-212ENST00000561009 KLRG2A4D1S0 409 aaPredicted RBP15.48■□□□□ 0.07
IRF9-212ENST00000561009 MAP1SQ66K74 1059 aaPredicted RBP15.48■□□□□ 0.07
IRF9-212ENST00000561009 SYNE4Q8N205 404 aa15.48■□□□□ 0.07
IRF9-212ENST00000561009 NYXQ9GZU5 481 aa15.48■□□□□ 0.07
IRF9-212ENST00000561009 WBP1LQ9NX94 342 aa15.48■□□□□ 0.07
IRF9-212ENST00000561009 DICER1Q9UPY3 1922 aaKnown RBP15.48■□□□□ 0.07
IRF9-212ENST00000561009 NPC1L1Q9UHC9 1359 aa15.48■□□□□ 0.07
IRF9-212ENST00000561009 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
IRF9-212ENST00000561009 RASSF10A6NK89 507 aa15.47■□□□□ 0.07
IRF9-212ENST00000561009 FZD9O00144 591 aa15.47■□□□□ 0.07
IRF9-212ENST00000561009 CC2D2BQ6DHV5 1058 aa15.47■□□□□ 0.07
IRF9-212ENST00000561009 PAXIP1Q6ZW49 1069 aaPredicted RBP15.47■□□□□ 0.07
IRF9-212ENST00000561009 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
IRF9-212ENST00000561009 GJA3Q9Y6H8 435 aa15.47■□□□□ 0.07
IRF9-212ENST00000561009 VIRMAQ69YN4 1812 aaKnown RBP15.47■□□□□ 0.07
IRF9-212ENST00000561009 SLX4Q8IY92 1834 aa15.47■□□□□ 0.07
IRF9-212ENST00000561009 SCN4AP35499 1836 aa15.46■□□□□ 0.07
IRF9-212ENST00000561009 PRAMEF22A3QJZ6 481 aa15.46■□□□□ 0.07
IRF9-212ENST00000561009 MCM10Q7L590 875 aa15.46■□□□□ 0.07
IRF9-212ENST00000561009 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.07
IRF9-212ENST00000561009 PSMD1Q99460 953 aa15.46■□□□□ 0.07
IRF9-212ENST00000561009 RSPH6AQ9H0K4 717 aa15.46■□□□□ 0.07
IRF9-212ENST00000561009 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
IRF9-212ENST00000561009 WDR33Q9C0J8 1336 aaKnown RBP15.45■□□□□ 0.06
IRF9-212ENST00000561009 NEFMP07197 916 aa15.45■□□□□ 0.06
IRF9-212ENST00000561009 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
IRF9-212ENST00000561009 ECE1P42892 770 aa15.45■□□□□ 0.06
IRF9-212ENST00000561009 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
IRF9-212ENST00000561009 GRIPAP1Q4V328 841 aa15.45■□□□□ 0.06
IRF9-212ENST00000561009 OLFM4Q6UX06 510 aa15.45■□□□□ 0.06
IRF9-212ENST00000561009 BCORQ6W2J9 1755 aa15.44■□□□□ 0.06
IRF9-212ENST00000561009 DDX21Q9NR30 783 aaKnown RBP eCLIP15.44■□□□□ 0.06
IRF9-212ENST00000561009 ARFGEF2Q9Y6D5 1785 aa15.44■□□□□ 0.06
IRF9-212ENST00000561009 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
IRF9-212ENST00000561009 HTATSF1O43719 755 aaKnown RBP15.43■□□□□ 0.06
IRF9-212ENST00000561009 HSPA8P11142 646 aaKnown RBP15.43■□□□□ 0.06
IRF9-212ENST00000561009 GRM1Q13255 1194 aa15.43■□□□□ 0.06
IRF9-212ENST00000561009 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
IRF9-212ENST00000561009 KIF6Q6ZMV9 814 aa15.43■□□□□ 0.06
IRF9-212ENST00000561009 LARGE2Q8N3Y3 721 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms