RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 BICC1Q9H694 974 aaKnown RBP17.71■□□□□ 0.43
CRTC3-210ENST00000560927 NPHP3Q7Z494 1330 aa17.71■□□□□ 0.43
CRTC3-210ENST00000560927 RASEFQ8IZ41 740 aa17.71■□□□□ 0.42
CRTC3-210ENST00000560927 NFATC2IPQ8NCF5 419 aa17.71■□□□□ 0.42
CRTC3-210ENST00000560927 SLC52A2Q9HAB3 445 aa17.71■□□□□ 0.42
CRTC3-210ENST00000560927 SNX14Q9Y5W7 946 aa17.71■□□□□ 0.42
CRTC3-210ENST00000560927 MST1RQ04912 1400 aa17.7■□□□□ 0.42
CRTC3-210ENST00000560927 CRYBG1Q9Y4K1 1723 aa17.7■□□□□ 0.42
CRTC3-210ENST00000560927 BRD1O95696 1058 aa17.7■□□□□ 0.42
CRTC3-210ENST00000560927 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
CRTC3-210ENST00000560927 MYL6BP14649 208 aa17.7■□□□□ 0.42
CRTC3-210ENST00000560927 CABLES1Q8TDN4 633 aa17.7■□□□□ 0.42
CRTC3-210ENST00000560927 INTS4Q96HW7 963 aaKnown RBP17.7■□□□□ 0.42
CRTC3-210ENST00000560927 PHKG2P15735 406 aa17.7■□□□□ 0.42
CRTC3-210ENST00000560927 ZSCAN23Q3MJ62 389 aa17.7■□□□□ 0.42
CRTC3-210ENST00000560927 ECHDC1Q9NTX5 307 aa17.7■□□□□ 0.42
CRTC3-210ENST00000560927 MEGF6O75095 1541 aa17.69■□□□□ 0.42
CRTC3-210ENST00000560927 UTYO14607 1347 aa17.69■□□□□ 0.42
CRTC3-210ENST00000560927 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
CRTC3-210ENST00000560927 DDX58O95786 925 aaKnown RBP17.69■□□□□ 0.42
CRTC3-210ENST00000560927 ANO8Q9HCE9 1232 aaPredicted RBP17.69■□□□□ 0.42
CRTC3-210ENST00000560927 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
CRTC3-210ENST00000560927 NSFL1CQ9UNZ2 370 aaKnown RBP17.69■□□□□ 0.42
CRTC3-210ENST00000560927 C5P01031 1676 aa17.68■□□□□ 0.42
CRTC3-210ENST00000560927 SASH1O94885 1247 aa17.68■□□□□ 0.42
CRTC3-210ENST00000560927 IFIT2P09913 472 aaKnown RBP17.68■□□□□ 0.42
CRTC3-210ENST00000560927 RIC3Q7Z5B4 369 aa17.68■□□□□ 0.42
CRTC3-210ENST00000560927 AACSQ86V21 672 aa17.68■□□□□ 0.42
CRTC3-210ENST00000560927 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
CRTC3-210ENST00000560927 TATP17735 454 aaPredicted RBP17.67■□□□□ 0.42
CRTC3-210ENST00000560927 ZNF445P59923 1031 aa17.67■□□□□ 0.42
CRTC3-210ENST00000560927 ERC1Q8IUD2 1116 aa17.67■□□□□ 0.42
CRTC3-210ENST00000560927 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
CRTC3-210ENST00000560927 ATF3P18847 181 aa17.67■□□□□ 0.42
CRTC3-210ENST00000560927 PIP4K2AP48426 406 aaPredicted RBP17.67■□□□□ 0.42
CRTC3-210ENST00000560927 CHRNA2Q15822 529 aa17.67■□□□□ 0.42
CRTC3-210ENST00000560927 KIAA1211Q6ZU35 1233 aa17.67■□□□□ 0.42
CRTC3-210ENST00000560927 TTC14Q96N46 770 aa17.67■□□□□ 0.42
CRTC3-210ENST00000560927 LARP6Q9BRS8 491 aaKnown RBP17.67■□□□□ 0.42
CRTC3-210ENST00000560927 DIAPH3Q9NSV4 1193 aa17.67■□□□□ 0.42
CRTC3-210ENST00000560927 TMEM94Q12767 1356 aa17.66■□□□□ 0.42
CRTC3-210ENST00000560927 PTH1RQ03431 593 aa17.66■□□□□ 0.42
CRTC3-210ENST00000560927 KLHDC4Q8TBB5 520 aa17.66■□□□□ 0.42
CRTC3-210ENST00000560927 XAGE3Q8WTP9 111 aa17.66■□□□□ 0.42
CRTC3-210ENST00000560927 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
CRTC3-210ENST00000560927 CPA1P15085 419 aa17.66■□□□□ 0.42
CRTC3-210ENST00000560927 NASPP49321 788 aaPredicted RBP17.66■□□□□ 0.42
CRTC3-210ENST00000560927 COPS6Q7L5N1 327 aa17.66■□□□□ 0.42
CRTC3-210ENST00000560927 SIL1Q9H173 461 aa17.66■□□□□ 0.42
CRTC3-210ENST00000560927 HDAC5Q9UQL6 1122 aa17.66■□□□□ 0.42
CRTC3-210ENST00000560927 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
CRTC3-210ENST00000560927 CSB-PGBD3P0DP91 1061 aa17.65■□□□□ 0.42
CRTC3-210ENST00000560927 TLR7Q9NYK1 1049 aaKnown RBP17.65■□□□□ 0.42
CRTC3-210ENST00000560927 NEURL1BA8MQ27 555 aa17.65■□□□□ 0.42
CRTC3-210ENST00000560927 AK2P54819 239 aa17.65■□□□□ 0.42
CRTC3-210ENST00000560927 GPATCH3Q96I76 525 aa17.65■□□□□ 0.42
CRTC3-210ENST00000560927 CCDC8Q9H0W5 538 aaPredicted RBP17.65■□□□□ 0.42
CRTC3-210ENST00000560927 USP16Q9Y5T5 823 aa17.65■□□□□ 0.42
CRTC3-210ENST00000560927 CYP27B1O15528 508 aa17.64■□□□□ 0.42
CRTC3-210ENST00000560927 FOXD4L6Q3SYB3 417 aaPredicted RBP17.64■□□□□ 0.42
CRTC3-210ENST00000560927 EPHA10Q5JZY3 1008 aa17.64■□□□□ 0.42
CRTC3-210ENST00000560927 LARP1Q6PKG0 1096 aaKnown RBP17.64■□□□□ 0.42
CRTC3-210ENST00000560927 FOXD4L3Q6VB84 417 aaPredicted RBP17.64■□□□□ 0.42
CRTC3-210ENST00000560927 MYD88Q99836 296 aa17.64■□□□□ 0.42
CRTC3-210ENST00000560927 TMEM63CQ9P1W3 806 aa17.64■□□□□ 0.42
CRTC3-210ENST00000560927 ERBB4Q15303 1308 aa17.64■□□□□ 0.41
CRTC3-210ENST00000560927 G3BP1Q13283 466 aaKnown RBP eCLIP17.64■□□□□ 0.41
CRTC3-210ENST00000560927 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.41
CRTC3-210ENST00000560927 COL18A1P39060 1754 aa17.64■□□□□ 0.41
CRTC3-210ENST00000560927 GCKRQ14397 625 aa17.63■□□□□ 0.41
CRTC3-210ENST00000560927 RUFY3Q7L099 469 aa17.63■□□□□ 0.41
CRTC3-210ENST00000560927 LRP10Q7Z4F1 713 aa17.63■□□□□ 0.41
CRTC3-210ENST00000560927 JARID2Q92833 1246 aaPredicted RBP17.63■□□□□ 0.41
CRTC3-210ENST00000560927 PRIM1P49642 420 aaKnown RBP17.63■□□□□ 0.41
CRTC3-210ENST00000560927 EVI5LQ96CN4 794 aa17.63■□□□□ 0.41
CRTC3-210ENST00000560927 CASTP20810 708 aaKnown RBP17.62■□□□□ 0.41
CRTC3-210ENST00000560927 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
CRTC3-210ENST00000560927 ADCK5Q3MIX3 580 aa17.62■□□□□ 0.41
CRTC3-210ENST00000560927 RUFY2Q8WXA3 655 aa17.62■□□□□ 0.41
CRTC3-210ENST00000560927 METTL22Q9BUU2 404 aaPredicted RBP17.62■□□□□ 0.41
CRTC3-210ENST00000560927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.41
CRTC3-210ENST00000560927 PRPF40BQ6NWY9 871 aaKnown RBP17.62■□□□□ 0.41
CRTC3-210ENST00000560927 FAM227BQ96M60 508 aa17.62■□□□□ 0.41
CRTC3-210ENST00000560927 RBSNQ9H1K0 784 aa17.62■□□□□ 0.41
CRTC3-210ENST00000560927 RPAP1Q9BWH6 1393 aaPredicted RBP17.62■□□□□ 0.41
CRTC3-210ENST00000560927 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
CRTC3-210ENST00000560927 DCAF5Q96JK2 942 aa17.61■□□□□ 0.41
CRTC3-210ENST00000560927 GDPD2Q9HCC8 539 aa17.61■□□□□ 0.41
CRTC3-210ENST00000560927 LARGE1O95461 756 aa17.6■□□□□ 0.41
CRTC3-210ENST00000560927 SNRPA1P09661 255 aaKnown RBP17.6■□□□□ 0.41
CRTC3-210ENST00000560927 CLCN1P35523 988 aa17.6■□□□□ 0.41
CRTC3-210ENST00000560927 ANKRD13DQ6ZTN6 518 aa17.6■□□□□ 0.41
CRTC3-210ENST00000560927 TTC5Q8N0Z6 440 aa17.6■□□□□ 0.41
CRTC3-210ENST00000560927 TRIM44Q96DX7 344 aaPredicted RBP17.6■□□□□ 0.41
CRTC3-210ENST00000560927 LIMCH1Q9UPQ0 1083 aa17.6■□□□□ 0.41
CRTC3-210ENST00000560927 SYCE3A1L190 88 aa17.6■□□□□ 0.41
CRTC3-210ENST00000560927 ESPNB1AK53 854 aa17.6■□□□□ 0.41
CRTC3-210ENST00000560927 DTNBO60941 627 aa17.6■□□□□ 0.41
CRTC3-210ENST00000560927 DDX54Q8TDD1 881 aaKnown RBP17.6■□□□□ 0.41
CRTC3-210ENST00000560927 BOLA2Q9H3K6 86 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms