RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 G3BP1Q13283 466 aaKnown RBP eCLIP12.52□□□□□ -0.41
RMDN3-209ENST00000560588 PROSER3Q2NL68 480 aa12.52□□□□□ -0.41
RMDN3-209ENST00000560588 UNC5CLQ8IV45 518 aa12.52□□□□□ -0.41
RMDN3-209ENST00000560588 C5P01031 1676 aa12.51□□□□□ -0.41
RMDN3-209ENST00000560588 COL15A1P39059 1388 aa12.51□□□□□ -0.41
RMDN3-209ENST00000560588 STRCP1A6NGW2 1772 aa12.51□□□□□ -0.41
RMDN3-209ENST00000560588 SNRPA1P09661 255 aaKnown RBP12.51□□□□□ -0.41
RMDN3-209ENST00000560588 PDIA6Q15084 440 aa12.51□□□□□ -0.41
RMDN3-209ENST00000560588 RIC3Q7Z5B4 369 aa12.51□□□□□ -0.41
RMDN3-209ENST00000560588 TTC5Q8N0Z6 440 aa12.51□□□□□ -0.41
RMDN3-209ENST00000560588 ERBB4Q15303 1308 aa12.51□□□□□ -0.41
RMDN3-209ENST00000560588 SPATA31A3Q5VYP0 1347 aa12.51□□□□□ -0.41
RMDN3-209ENST00000560588 MEGF6O75095 1541 aa12.5□□□□□ -0.41
RMDN3-209ENST00000560588 EVI5LQ96CN4 794 aa12.5□□□□□ -0.41
RMDN3-209ENST00000560588 DIAPH3Q9NSV4 1193 aa12.5□□□□□ -0.41
RMDN3-209ENST00000560588 DDX49Q9Y6V7 483 aaKnown RBP12.5□□□□□ -0.41
RMDN3-209ENST00000560588 LAMB4A4D0S4 1761 aa12.5□□□□□ -0.41
RMDN3-209ENST00000560588 FMNL2Q96PY5 1086 aa12.5□□□□□ -0.41
RMDN3-209ENST00000560588 METTL22Q9BUU2 404 aaPredicted RBP12.5□□□□□ -0.41
RMDN3-209ENST00000560588 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
RMDN3-209ENST00000560588 LSG1Q9H089 658 aaKnown RBP12.49□□□□□ -0.41
RMDN3-209ENST00000560588 PALD1Q9ULE6 856 aa12.49□□□□□ -0.41
RMDN3-209ENST00000560588 MCTP1Q6DN14 999 aa12.49□□□□□ -0.41
RMDN3-209ENST00000560588 ZGPATQ8N5A5 531 aaKnown RBP12.49□□□□□ -0.41
RMDN3-209ENST00000560588 SUCLG2Q96I99 432 aa12.49□□□□□ -0.41
RMDN3-209ENST00000560588 NEURL1BA8MQ27 555 aa12.48□□□□□ -0.41
RMDN3-209ENST00000560588 CWF19L2Q2TBE0 894 aaKnown RBP12.48□□□□□ -0.41
RMDN3-209ENST00000560588 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
RMDN3-209ENST00000560588 BRD1O95696 1058 aa12.47□□□□□ -0.41
RMDN3-209ENST00000560588 MBD3O95983 291 aa12.47□□□□□ -0.41
RMDN3-209ENST00000560588 ZNF445P59923 1031 aa12.47□□□□□ -0.41
RMDN3-209ENST00000560588 GCKRQ14397 625 aa12.47□□□□□ -0.41
RMDN3-209ENST00000560588 AACSQ86V21 672 aa12.47□□□□□ -0.41
RMDN3-209ENST00000560588 NFATC2IPQ8NCF5 419 aa12.47□□□□□ -0.41
RMDN3-209ENST00000560588 XAGE3Q8WTP9 111 aa12.47□□□□□ -0.41
RMDN3-209ENST00000560588 KCNB2Q92953 911 aa12.47□□□□□ -0.41
RMDN3-209ENST00000560588 TM6SF1Q9BZW5 370 aa12.47□□□□□ -0.41
RMDN3-209ENST00000560588 BICC1Q9H694 974 aaKnown RBP12.47□□□□□ -0.41
RMDN3-209ENST00000560588 PRAMEF22A3QJZ6 481 aa12.46□□□□□ -0.41
RMDN3-209ENST00000560588 IGKV5-2P06315 115 aa12.46□□□□□ -0.41
RMDN3-209ENST00000560588 CABP4P57796 275 aa12.46□□□□□ -0.41
RMDN3-209ENST00000560588 AIMP1Q12904 312 aaKnown RBP12.46□□□□□ -0.41
RMDN3-209ENST00000560588 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.41
RMDN3-209ENST00000560588 SNRKQ9NRH2 765 aa12.46□□□□□ -0.41
RMDN3-209ENST00000560588 ZDHHC9Q9Y397 364 aa12.46□□□□□ -0.41
RMDN3-209ENST00000560588 SNX14Q9Y5W7 946 aa12.46□□□□□ -0.41
RMDN3-209ENST00000560588 WDR33Q9C0J8 1336 aaKnown RBP12.46□□□□□ -0.41
RMDN3-209ENST00000560588 SLC39A6Q13433 755 aa12.46□□□□□ -0.42
RMDN3-209ENST00000560588 KAZALD1Q96I82 304 aa12.46□□□□□ -0.42
RMDN3-209ENST00000560588 ZNF496Q96IT1 587 aaPredicted RBP12.46□□□□□ -0.42
RMDN3-209ENST00000560588 RFX7Q2KHR2 1363 aa12.46□□□□□ -0.42
RMDN3-209ENST00000560588 AFDNP55196 1824 aaKnown RBP12.45□□□□□ -0.42
RMDN3-209ENST00000560588 MAP4K4O95819 1239 aaPredicted RBP12.45□□□□□ -0.42
RMDN3-209ENST00000560588 PDIA4P13667 645 aaKnown RBP12.45□□□□□ -0.42
RMDN3-209ENST00000560588 COPS6Q7L5N1 327 aa12.45□□□□□ -0.42
RMDN3-209ENST00000560588 TICAM2Q86XR7 235 aa12.45□□□□□ -0.42
RMDN3-209ENST00000560588 ZSCAN31Q96LW9 406 aaPredicted RBP12.45□□□□□ -0.42
RMDN3-209ENST00000560588 COPRSQ9NQ92 184 aa12.45□□□□□ -0.42
RMDN3-209ENST00000560588 CYP27B1O15528 508 aa12.45□□□□□ -0.42
RMDN3-209ENST00000560588 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
RMDN3-209ENST00000560588 ANP32BQ92688 251 aaKnown RBP12.45□□□□□ -0.42
RMDN3-209ENST00000560588 TTC14Q96N46 770 aa12.45□□□□□ -0.42
RMDN3-209ENST00000560588 MYD88Q99836 296 aa12.45□□□□□ -0.42
RMDN3-209ENST00000560588 LIMCH1Q9UPQ0 1083 aa12.45□□□□□ -0.42
RMDN3-209ENST00000560588 PA2G4Q9UQ80 394 aaKnown RBP12.45□□□□□ -0.42
RMDN3-209ENST00000560588 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.45□□□□□ -0.42
RMDN3-209ENST00000560588 PCDH11XQ9BZA7 1347 aa12.45□□□□□ -0.42
RMDN3-209ENST00000560588 PCDH11YQ9BZA8 1340 aa12.45□□□□□ -0.42
RMDN3-209ENST00000560588 ARFGEF2Q9Y6D5 1785 aa12.44□□□□□ -0.42
RMDN3-209ENST00000560588 ERVV-2B6SEH9 535 aa12.44□□□□□ -0.42
RMDN3-209ENST00000560588 SASH1O94885 1247 aa12.44□□□□□ -0.42
RMDN3-209ENST00000560588 MYL6BP14649 208 aa12.43□□□□□ -0.42
RMDN3-209ENST00000560588 ZKSCAN1P17029 563 aaPredicted RBP12.43□□□□□ -0.42
RMDN3-209ENST00000560588 VPS53Q5VIR6 699 aa12.43□□□□□ -0.42
RMDN3-209ENST00000560588 LRP10Q7Z4F1 713 aa12.43□□□□□ -0.42
RMDN3-209ENST00000560588 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
RMDN3-209ENST00000560588 SH2B1Q9NRF2 756 aaPredicted RBP12.43□□□□□ -0.42
RMDN3-209ENST00000560588 WDR17Q8IZU2 1322 aa12.43□□□□□ -0.42
RMDN3-209ENST00000560588 PRPF40AO75400 957 aaKnown RBP12.43□□□□□ -0.42
RMDN3-209ENST00000560588 PKP1Q13835 747 aa12.43□□□□□ -0.42
RMDN3-209ENST00000560588 RABL6Q3YEC7 729 aaPredicted RBP12.43□□□□□ -0.42
RMDN3-209ENST00000560588 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
RMDN3-209ENST00000560588 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
RMDN3-209ENST00000560588 IL25Q9H293 177 aa12.43□□□□□ -0.42
RMDN3-209ENST00000560588 XIRP1Q702N8 1843 aaKnown RBP12.43□□□□□ -0.42
RMDN3-209ENST00000560588 PSMA5P28066 241 aa12.42□□□□□ -0.42
RMDN3-209ENST00000560588 CCDC173Q0VFZ6 552 aa12.42□□□□□ -0.42
RMDN3-209ENST00000560588 SYAP1Q96A49 352 aaPredicted RBP12.42□□□□□ -0.42
RMDN3-209ENST00000560588 EAF2Q96CJ1 260 aaPredicted RBP12.42□□□□□ -0.42
RMDN3-209ENST00000560588 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
RMDN3-209ENST00000560588 CCDC171Q6TFL3 1326 aa12.42□□□□□ -0.42
RMDN3-209ENST00000560588 UBR2Q8IWV8 1755 aa12.42□□□□□ -0.42
RMDN3-209ENST00000560588 GLI3P10071 1580 aa12.42□□□□□ -0.42
RMDN3-209ENST00000560588 NCLP19338 710 aaKnown RBP12.42□□□□□ -0.42
RMDN3-209ENST00000560588 NKX1-1Q15270 411 aaPredicted RBP12.42□□□□□ -0.42
RMDN3-209ENST00000560588 CHRNA2Q15822 529 aa12.42□□□□□ -0.42
RMDN3-209ENST00000560588 RNF20Q5VTR2 975 aa12.42□□□□□ -0.42
RMDN3-209ENST00000560588 ZCRB1Q8TBF4 217 aaKnown RBP12.42□□□□□ -0.42
RMDN3-209ENST00000560588 ATP6V1DQ9Y5K8 247 aa12.42□□□□□ -0.42
RMDN3-209ENST00000560588 CYP46A1Q9Y6A2 500 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms