RNA–Protein interactions for RNA: ENST00000560511.5

CHRNB4-205, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 3

Gene CHRNB4, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-205ENST00000560511 CEMIPQ8WUJ3 1361 aa11.21□□□□□ -0.61
CHRNB4-205ENST00000560511 SOS1Q07889 1333 aaPredicted RBP11.21□□□□□ -0.61
CHRNB4-205ENST00000560511 FOXN1O15353 648 aa11.21□□□□□ -0.61
CHRNB4-205ENST00000560511 C21orf2O43822 256 aa11.21□□□□□ -0.61
CHRNB4-205ENST00000560511 NEFMP07197 916 aa11.21□□□□□ -0.61
CHRNB4-205ENST00000560511 MCM10Q7L590 875 aa11.21□□□□□ -0.61
CHRNB4-205ENST00000560511 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
CHRNB4-205ENST00000560511 MYBBP1AQ9BQG0 1328 aaKnown RBP11.2□□□□□ -0.62
CHRNB4-205ENST00000560511 CYP19A1P11511 503 aaPredicted RBP11.2□□□□□ -0.62
CHRNB4-205ENST00000560511 CANXP27824 592 aaKnown RBP11.2□□□□□ -0.62
CHRNB4-205ENST00000560511 DCTN1Q14203 1278 aa11.2□□□□□ -0.62
CHRNB4-205ENST00000560511 ZNF790Q6PG37 636 aa11.2□□□□□ -0.62
CHRNB4-205ENST00000560511 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
CHRNB4-205ENST00000560511 COL15A1P39059 1388 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 AFDNP55196 1824 aaKnown RBP11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 TIAM2Q8IVF5 1701 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 BTBD11A6QL63 1104 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 NPHP1O15259 732 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 KCNQ3O43525 872 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 PRR29P0C7W0 189 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 POTEIP0CG38 1075 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 CCDC24Q8N4L8 307 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 ZBTB1Q9Y2K1 713 aa11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 ZNF330Q9Y3S2 320 aaPredicted RBP11.19□□□□□ -0.62
CHRNB4-205ENST00000560511 HEG1Q9ULI3 1381 aa11.18□□□□□ -0.62
CHRNB4-205ENST00000560511 MAPK8IP3Q9UPT6 1336 aa11.18□□□□□ -0.62
CHRNB4-205ENST00000560511 DDNO94850 711 aaPredicted RBP11.18□□□□□ -0.62
CHRNB4-205ENST00000560511 CTCFP49711 727 aaPredicted RBP11.18□□□□□ -0.62
CHRNB4-205ENST00000560511 FMNL2Q96PY5 1086 aa11.18□□□□□ -0.62
CHRNB4-205ENST00000560511 PLEKHF1Q96S99 279 aa11.18□□□□□ -0.62
CHRNB4-205ENST00000560511 BCL2L12Q9HB09 334 aa11.18□□□□□ -0.62
CHRNB4-205ENST00000560511 VIRMAQ69YN4 1812 aaKnown RBP11.18□□□□□ -0.62
CHRNB4-205ENST00000560511 CARMIL3Q8ND23 1372 aa11.17□□□□□ -0.62
CHRNB4-205ENST00000560511 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
CHRNB4-205ENST00000560511 STARD3NLO95772 234 aa11.17□□□□□ -0.62
CHRNB4-205ENST00000560511 PDE6BP35913 854 aa11.17□□□□□ -0.62
CHRNB4-205ENST00000560511 FXR2P51116 673 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHRNB4-205ENST00000560511 TAOK3Q9H2K8 898 aa11.17□□□□□ -0.62
CHRNB4-205ENST00000560511 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
CHRNB4-205ENST00000560511 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
CHRNB4-205ENST00000560511 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
CHRNB4-205ENST00000560511 VEGFBP49765 207 aa11.16□□□□□ -0.62
CHRNB4-205ENST00000560511 LBX1P52954 281 aa11.16□□□□□ -0.62
CHRNB4-205ENST00000560511 NFE2L2Q16236 605 aa11.16□□□□□ -0.62
CHRNB4-205ENST00000560511 EAPPQ56P03 285 aaPredicted RBP11.16□□□□□ -0.62
CHRNB4-205ENST00000560511 BRIP1Q9BX63 1249 aa11.16□□□□□ -0.62
CHRNB4-205ENST00000560511 PNNQ9H307 717 aaKnown RBP11.16□□□□□ -0.62
CHRNB4-205ENST00000560511 SIPA1L3O60292 1781 aaPredicted RBP11.16□□□□□ -0.62
CHRNB4-205ENST00000560511 A0A087WZG4 1122 aa11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 IQCA1LA6NCM1 817 aa11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 TMEM88BA6NKF7 163 aa11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 TBC1D9BQ66K14 1250 aa11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 THUMPD2Q9BTF0 503 aaKnown RBP11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 PRKRIP1Q9H875 184 aaPredicted RBP11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 PDZRN3Q9UPQ7 1066 aa11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 DLEC1Q9Y238 1755 aa11.15□□□□□ -0.62
CHRNB4-205ENST00000560511 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHRNB4-205ENST00000560511 TAF7Q15545 349 aaPredicted RBP11.14□□□□□ -0.63
CHRNB4-205ENST00000560511 LDHDQ86WU2 507 aa11.14□□□□□ -0.63
CHRNB4-205ENST00000560511 CNKSR1Q969H4 720 aa11.14□□□□□ -0.63
CHRNB4-205ENST00000560511 MIS18AQ9NYP9 233 aa11.14□□□□□ -0.63
CHRNB4-205ENST00000560511 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
CHRNB4-205ENST00000560511 TBC1D2BQ9UPU7 963 aa11.14□□□□□ -0.63
CHRNB4-205ENST00000560511 NRXN2Q9P2S2 1712 aa11.13□□□□□ -0.63
CHRNB4-205ENST00000560511 PRAMEF22A3QJZ6 481 aa11.13□□□□□ -0.63
CHRNB4-205ENST00000560511 A1BGP04217 495 aa11.13□□□□□ -0.63
CHRNB4-205ENST00000560511 EIF5P55010 431 aaKnown RBP11.13□□□□□ -0.63
CHRNB4-205ENST00000560511 PRR5LQ6MZQ0 368 aa11.13□□□□□ -0.63
CHRNB4-205ENST00000560511 CCDC146Q8IYE0 955 aa11.13□□□□□ -0.63
CHRNB4-205ENST00000560511 SETDB2Q96T68 719 aa11.13□□□□□ -0.63
CHRNB4-205ENST00000560511 TAF1DQ9H5J8 278 aaPredicted RBP11.13□□□□□ -0.63
CHRNB4-205ENST00000560511 DICER1Q9UPY3 1922 aaKnown RBP11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 SLC34A2O95436 690 aa11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 SNRPA1P09661 255 aaKnown RBP11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 PIP4K2AP48426 406 aaPredicted RBP11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 RIPK4P57078 832 aa11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 ST5P78524 1137 aa11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 SOGA3Q5TF21 947 aa11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 PRPF40BQ6NWY9 871 aaKnown RBP11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 CNBD1Q8NA66 436 aa11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 ABHD8Q96I13 439 aa11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 WBP1LQ9NX94 342 aa11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 RRP7AQ9Y3A4 280 aaKnown RBP11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 USP16Q9Y5T5 823 aa11.12□□□□□ -0.63
CHRNB4-205ENST00000560511 PASKQ96RG2 1323 aa11.11□□□□□ -0.63
CHRNB4-205ENST00000560511 LTBP3Q9NS15 1303 aa11.11□□□□□ -0.63
CHRNB4-205ENST00000560511 IL6STP40189 918 aaPredicted RBP11.11□□□□□ -0.63
CHRNB4-205ENST00000560511 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
CHRNB4-205ENST00000560511 DEFB115Q30KQ5 88 aa11.11□□□□□ -0.63
CHRNB4-205ENST00000560511 STYK1Q6J9G0 422 aa11.11□□□□□ -0.63
CHRNB4-205ENST00000560511 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
CHRNB4-205ENST00000560511 PNISRQ8TF01 805 aaKnown RBP11.11□□□□□ -0.63
CHRNB4-205ENST00000560511 ABT1Q9ULW3 272 aaKnown RBP11.11□□□□□ -0.63
CHRNB4-205ENST00000560511 FER1L6Q2WGJ9 1857 aa11.1□□□□□ -0.63
CHRNB4-205ENST00000560511 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms