RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 FLIIQ13045 1269 aa10.01□□□□□ -0.81
ZEB1-216ENST00000559496 GRIP2Q9C0E4 1043 aa10.01□□□□□ -0.81
ZEB1-216ENST00000559496 DOLKQ9UPQ8 538 aa10.01□□□□□ -0.81
ZEB1-216ENST00000559496 HECW2Q9P2P5 1572 aa10.01□□□□□ -0.81
ZEB1-216ENST00000559496 ERBINQ96RT1 1412 aa10.01□□□□□ -0.81
ZEB1-216ENST00000559496 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
ZEB1-216ENST00000559496 SLC27A3Q5K4L6 730 aa10.01□□□□□ -0.81
ZEB1-216ENST00000559496 ARHGEF10LQ9HCE6 1279 aa10.01□□□□□ -0.81
ZEB1-216ENST00000559496 KIDINS220Q9ULH0 1771 aa10□□□□□ -0.81
ZEB1-216ENST00000559496 WWC1Q8IX03 1113 aa10□□□□□ -0.81
ZEB1-216ENST00000559496 COL25A1Q9BXS0 654 aaPredicted RBP10□□□□□ -0.81
ZEB1-216ENST00000559496 RICTORQ6R327 1708 aa9.99□□□□□ -0.81
ZEB1-216ENST00000559496 MLH3Q9UHC1 1453 aa9.99□□□□□ -0.81
ZEB1-216ENST00000559496 RAPGEF3O95398 923 aa9.99□□□□□ -0.81
ZEB1-216ENST00000559496 RHOQP17081 205 aa9.99□□□□□ -0.81
ZEB1-216ENST00000559496 SV2AQ7L0J3 742 aa9.99□□□□□ -0.81
ZEB1-216ENST00000559496 VWA5B2Q8N398 1253 aa9.99□□□□□ -0.81
ZEB1-216ENST00000559496 SIRT1Q96EB6 747 aa9.99□□□□□ -0.81
ZEB1-216ENST00000559496 MPHOSPH9Q99550 1183 aa9.99□□□□□ -0.81
ZEB1-216ENST00000559496 RAD21O60216 631 aa9.98□□□□□ -0.81
ZEB1-216ENST00000559496 MAP7D1Q3KQU3 841 aa9.98□□□□□ -0.81
ZEB1-216ENST00000559496 RNFT1Q5M7Z0 435 aa9.98□□□□□ -0.81
ZEB1-216ENST00000559496 CNKSR1Q969H4 720 aa9.98□□□□□ -0.81
ZEB1-216ENST00000559496 CNTNAP3BQ96NU0 1288 aa9.98□□□□□ -0.81
ZEB1-216ENST00000559496 ESYT1Q9BSJ8 1104 aa9.98□□□□□ -0.81
ZEB1-216ENST00000559496 CNTNAP3Q9BZ76 1288 aa9.98□□□□□ -0.81
ZEB1-216ENST00000559496 FRMPD1Q5SYB0 1578 aa9.98□□□□□ -0.81
ZEB1-216ENST00000559496 NUP155O75694 1391 aa9.97□□□□□ -0.81
ZEB1-216ENST00000559496 PZPP20742 1482 aa9.97□□□□□ -0.81
ZEB1-216ENST00000559496 KDM5DQ9BY66 1539 aa9.97□□□□□ -0.81
ZEB1-216ENST00000559496 UNC13BO14795 1591 aa9.97□□□□□ -0.81
ZEB1-216ENST00000559496 CDC14CA4D256 554 aa9.97□□□□□ -0.81
ZEB1-216ENST00000559496 POU4F2Q12837 409 aa9.97□□□□□ -0.81
ZEB1-216ENST00000559496 XAGE2Q96GT9 111 aa9.97□□□□□ -0.81
ZEB1-216ENST00000559496 RAB6BQ9NRW1 208 aa9.97□□□□□ -0.81
ZEB1-216ENST00000559496 CUEDC1Q9NWM3 386 aaPredicted RBP9.97□□□□□ -0.81
ZEB1-216ENST00000559496 SPATA31C2B4DYI2 1134 aa9.96□□□□□ -0.82
ZEB1-216ENST00000559496 IL2RAP01589 272 aa9.96□□□□□ -0.82
ZEB1-216ENST00000559496 CENPCQ03188 943 aa9.96□□□□□ -0.82
ZEB1-216ENST00000559496 OXLD1Q5BKU9 147 aa9.96□□□□□ -0.82
ZEB1-216ENST00000559496 ESCO1Q5FWF5 840 aa9.96□□□□□ -0.82
ZEB1-216ENST00000559496 WDR44Q5JSH3 913 aa9.96□□□□□ -0.82
ZEB1-216ENST00000559496 POM121Q96HA1 1249 aa9.96□□□□□ -0.82
ZEB1-216ENST00000559496 DHX29Q7Z478 1369 aaKnown RBP9.96□□□□□ -0.82
ZEB1-216ENST00000559496 A2MP01023 1474 aa9.96□□□□□ -0.82
ZEB1-216ENST00000559496 ZMYM4Q5VZL5 1548 aa9.95□□□□□ -0.82
ZEB1-216ENST00000559496 ABCA6Q8N139 1617 aa9.95□□□□□ -0.82
ZEB1-216ENST00000559496 HRH3Q9Y5N1 445 aa9.95□□□□□ -0.82
ZEB1-216ENST00000559496 EIF2AK4Q9P2K8 1649 aaKnown RBP9.95□□□□□ -0.82
ZEB1-216ENST00000559496 NBPF10Q6P3W6 841 aaKnown RBP9.94□□□□□ -0.82
ZEB1-216ENST00000559496 NBPF15Q8N660 670 aa9.94□□□□□ -0.82
ZEB1-216ENST00000559496 PLPP7Q8NBV4 271 aa9.94□□□□□ -0.82
ZEB1-216ENST00000559496 GMCL1Q96IK5 515 aa9.94□□□□□ -0.82
ZEB1-216ENST00000559496 ALG2Q9H553 416 aa9.94□□□□□ -0.82
ZEB1-216ENST00000559496 DYRK1BQ9Y463 629 aa9.94□□□□□ -0.82
ZEB1-216ENST00000559496 MAGI2Q86UL8 1455 aa9.94□□□□□ -0.82
ZEB1-216ENST00000559496 FAM135AQ9P2D6 1515 aa9.94□□□□□ -0.82
ZEB1-216ENST00000559496 DIP2CQ9Y2E4 1556 aa9.94□□□□□ -0.82
ZEB1-216ENST00000559496 DEPDC5O75140 1603 aa9.92□□□□□ -0.82
ZEB1-216ENST00000559496 IQGAP3Q86VI3 1631 aa9.92□□□□□ -0.82
ZEB1-216ENST00000559496 YEATS2Q9ULM3 1422 aa9.92□□□□□ -0.82
ZEB1-216ENST00000559496 KIF3BO15066 747 aa9.92□□□□□ -0.82
ZEB1-216ENST00000559496 SLURP2P0DP57 97 aa9.92□□□□□ -0.82
ZEB1-216ENST00000559496 TAS1R3Q7RTX0 852 aa9.92□□□□□ -0.82
ZEB1-216ENST00000559496 SIN3AQ96ST3 1273 aa9.92□□□□□ -0.82
ZEB1-216ENST00000559496 ZSCAN10Q96SZ4 725 aaPredicted RBP9.92□□□□□ -0.82
ZEB1-216ENST00000559496 COL17A1Q9UMD9 1497 aaPredicted RBP9.92□□□□□ -0.82
ZEB1-216ENST00000559496 WASLO00401 505 aaPredicted RBP9.91□□□□□ -0.82
ZEB1-216ENST00000559496 TRIM22Q8IYM9 498 aa9.91□□□□□ -0.82
ZEB1-216ENST00000559496 KANK1Q14678 1352 aa9.91□□□□□ -0.82
ZEB1-216ENST00000559496 ANKRD30BQ9BXX2 1392 aa9.91□□□□□ -0.82
ZEB1-216ENST00000559496 GTF2E1P29083 439 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-216ENST00000559496 ZNF837Q96EG3 531 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-216ENST00000559496 GAS2L1Q99501 681 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-216ENST00000559496 FHDC1Q9C0D6 1143 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-216ENST00000559496 ETNK1Q9HBU6 452 aa9.9□□□□□ -0.82
ZEB1-216ENST00000559496 TIMMDC1Q9NPL8 285 aa9.9□□□□□ -0.82
ZEB1-216ENST00000559496 PRDM15P57071 1507 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-216ENST00000559496 RNF17Q9BXT8 1623 aaKnown RBP9.89□□□□□ -0.83
ZEB1-216ENST00000559496 H7C1W4 665 aa9.89□□□□□ -0.83
ZEB1-216ENST00000559496 GAS6Q14393 721 aa9.89□□□□□ -0.83
ZEB1-216ENST00000559496 ZNF385CQ66K41 422 aaPredicted RBP9.89□□□□□ -0.83
ZEB1-216ENST00000559496 RIPOR1Q6ZS17 1223 aa9.89□□□□□ -0.83
ZEB1-216ENST00000559496 BCORL1Q5H9F3 1711 aa9.89□□□□□ -0.83
ZEB1-216ENST00000559496 MROH1Q8NDA8 1641 aa9.89□□□□□ -0.83
ZEB1-216ENST00000559496 PIK3CDO00329 1044 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 LZTS3O60299 673 aaPredicted RBP9.88□□□□□ -0.83
ZEB1-216ENST00000559496 DBN1Q16643 649 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 TMEM214Q6NUQ4 689 aaKnown RBP9.88□□□□□ -0.83
ZEB1-216ENST00000559496 NFATC2IPQ8NCF5 419 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 ARHGEF40Q8TER5 1519 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 ATP10AO60312 1499 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 TONSLQ96HA7 1378 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 VWDEQ8N2E2 1590 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 F11P03951 625 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 GNASQ5JWF2 1037 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 FOXR1Q6PIV2 292 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
ZEB1-216ENST00000559496 REREQ9P2R6 1566 aa9.87□□□□□ -0.83
ZEB1-216ENST00000559496 TET3O43151 1660 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms