RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 HEG1Q9ULI3 1381 aa22.14■■□□□ 1.14
PSEN1-224ENST00000559361 DDNO94850 711 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-224ENST00000559361 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-224ENST00000559361 TTC5Q8N0Z6 440 aa22.14■■□□□ 1.13
PSEN1-224ENST00000559361 CCDC24Q8N4L8 307 aa22.14■■□□□ 1.13
PSEN1-224ENST00000559361 ZNF219Q9P2Y4 722 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-224ENST00000559361 MKRN1Q9UHC7 482 aaKnown RBP22.14■■□□□ 1.13
PSEN1-224ENST00000559361 TBC1D2BQ9UPU7 963 aa22.14■■□□□ 1.13
PSEN1-224ENST00000559361 SIPA1L3O60292 1781 aaPredicted RBP22.13■■□□□ 1.13
PSEN1-224ENST00000559361 ARFGEF2Q9Y6D5 1785 aa22.13■■□□□ 1.13
PSEN1-224ENST00000559361 NEFMP07197 916 aa22.13■■□□□ 1.13
PSEN1-224ENST00000559361 STYK1Q6J9G0 422 aa22.13■■□□□ 1.13
PSEN1-224ENST00000559361 ZNF790Q6PG37 636 aa22.13■■□□□ 1.13
PSEN1-224ENST00000559361 CNKSR1Q969H4 720 aa22.13■■□□□ 1.13
PSEN1-224ENST00000559361 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
PSEN1-224ENST00000559361 PASKQ96RG2 1323 aa22.12■■□□□ 1.13
PSEN1-224ENST00000559361 CACNA1SQ13698 1873 aa22.12■■□□□ 1.13
PSEN1-224ENST00000559361 SRGNP10124 158 aa22.12■■□□□ 1.13
PSEN1-224ENST00000559361 IL17REQ8NFR9 667 aa22.12■■□□□ 1.13
PSEN1-224ENST00000559361 SCN4AP35499 1836 aa22.12■■□□□ 1.13
PSEN1-224ENST00000559361 CNTNAP1P78357 1384 aa22.12■■□□□ 1.13
PSEN1-224ENST00000559361 CAMTA2O94983 1202 aa22.11■■□□□ 1.13
PSEN1-224ENST00000559361 C7orf43Q8WVR3 580 aa22.11■■□□□ 1.13
PSEN1-224ENST00000559361 L3MBTL3Q96JM7 780 aaPredicted RBP22.11■■□□□ 1.13
PSEN1-224ENST00000559361 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
PSEN1-224ENST00000559361 FOXN1O15353 648 aa22.1■■□□□ 1.13
PSEN1-224ENST00000559361 SOGA3Q5TF21 947 aa22.1■■□□□ 1.13
PSEN1-224ENST00000559361 PRPF40BQ6NWY9 871 aaKnown RBP22.1■■□□□ 1.13
PSEN1-224ENST00000559361 SETDB2Q96T68 719 aa22.1■■□□□ 1.13
PSEN1-224ENST00000559361 PRKAR2BP31323 418 aa22.09■■□□□ 1.13
PSEN1-224ENST00000559361 CNBD1Q8NA66 436 aa22.09■■□□□ 1.13
PSEN1-224ENST00000559361 MASTLQ96GX5 879 aa22.09■■□□□ 1.13
PSEN1-224ENST00000559361 PRDM10Q9NQV6 1147 aa22.09■■□□□ 1.13
PSEN1-224ENST00000559361 IQCA1LA6NCM1 817 aa22.08■■□□□ 1.13
PSEN1-224ENST00000559361 A1BGP04217 495 aa22.08■■□□□ 1.13
PSEN1-224ENST00000559361 LDHDQ86WU2 507 aa22.08■■□□□ 1.13
PSEN1-224ENST00000559361 MAPK8IP3Q9UPT6 1336 aa22.07■■□□□ 1.12
PSEN1-224ENST00000559361 BCORQ6W2J9 1755 aa22.07■■□□□ 1.12
PSEN1-224ENST00000559361 ITGBL1O95965 494 aaPredicted RBP22.07■■□□□ 1.12
PSEN1-224ENST00000559361 TEFQ10587 303 aa22.07■■□□□ 1.12
PSEN1-224ENST00000559361 TAF1DQ9H5J8 278 aaPredicted RBP22.07■■□□□ 1.12
PSEN1-224ENST00000559361 GNAT3A8MTJ3 354 aa22.06■■□□□ 1.12
PSEN1-224ENST00000559361 RUNDC1Q96C34 613 aa22.06■■□□□ 1.12
PSEN1-224ENST00000559361 FMNL2Q96PY5 1086 aa22.06■■□□□ 1.12
PSEN1-224ENST00000559361 PLEKHF1Q96S99 279 aa22.06■■□□□ 1.12
PSEN1-224ENST00000559361 ZNF330Q9Y3S2 320 aaPredicted RBP22.06■■□□□ 1.12
PSEN1-224ENST00000559361 KLRG2A4D1S0 409 aaPredicted RBP22.05■■□□□ 1.12
PSEN1-224ENST00000559361 ST5P78524 1137 aa22.05■■□□□ 1.12
PSEN1-224ENST00000559361 CEMIPQ8WUJ3 1361 aa22.04■■□□□ 1.12
PSEN1-224ENST00000559361 CLEC4GQ6UXB4 293 aa22.04■■□□□ 1.12
PSEN1-224ENST00000559361 FAM9BQ8IZU0 186 aa22.04■■□□□ 1.12
PSEN1-224ENST00000559361 GAS2L2Q8NHY3 880 aa22.04■■□□□ 1.12
PSEN1-224ENST00000559361 ADAMTSL1Q8N6G6 1762 aa22.03■■□□□ 1.12
PSEN1-224ENST00000559361 TMEM88BA6NKF7 163 aa22.03■■□□□ 1.12
PSEN1-224ENST00000559361 VEGFBP49765 207 aa22.03■■□□□ 1.12
PSEN1-224ENST00000559361 DZIP3Q86Y13 1208 aaKnown RBP22.03■■□□□ 1.12
PSEN1-224ENST00000559361 CTCFP49711 727 aaPredicted RBP22.02■■□□□ 1.12
PSEN1-224ENST00000559361 WBP1LQ9NX94 342 aa22.02■■□□□ 1.12
PSEN1-224ENST00000559361 KCNQ3O43525 872 aa22.01■■□□□ 1.11
PSEN1-224ENST00000559361 CCDC93Q567U6 631 aa22.01■■□□□ 1.11
PSEN1-224ENST00000559361 NPM2Q86SE8 214 aaKnown RBP22.01■■□□□ 1.11
PSEN1-224ENST00000559361 USP16Q9Y5T5 823 aa22.01■■□□□ 1.11
PSEN1-224ENST00000559361 NPHP1O15259 732 aa22■■□□□ 1.11
PSEN1-224ENST00000559361 NPR1P16066 1061 aa22■■□□□ 1.11
PSEN1-224ENST00000559361 FKBP4Q02790 459 aaKnown RBP eCLIP22■■□□□ 1.11
PSEN1-224ENST00000559361 NCBP3Q53F19 620 aaKnown RBP22■■□□□ 1.11
PSEN1-224ENST00000559361 NGEFQ8N5V2 710 aa22■■□□□ 1.11
PSEN1-224ENST00000559361 ZNF541Q9H0D2 1346 aa21.99■■□□□ 1.11
PSEN1-224ENST00000559361 BTBD11A6QL63 1104 aa21.98■■□□□ 1.11
PSEN1-224ENST00000559361 RGL2O15211 777 aa21.98■■□□□ 1.11
PSEN1-224ENST00000559361 NBPF5PQ86XG9 351 aaPredicted RBP21.98■■□□□ 1.11
PSEN1-224ENST00000559361 PHACTR3Q96KR7 559 aa21.98■■□□□ 1.11
PSEN1-224ENST00000559361 HACL1Q9UJ83 578 aa21.98■■□□□ 1.11
PSEN1-224ENST00000559361 RASSF10A6NK89 507 aa21.97■■□□□ 1.11
PSEN1-224ENST00000559361 FZD9O00144 591 aa21.97■■□□□ 1.11
PSEN1-224ENST00000559361 NFE2L2Q16236 605 aa21.97■■□□□ 1.11
PSEN1-224ENST00000559361 AIDAQ96BJ3 306 aa21.97■■□□□ 1.11
PSEN1-224ENST00000559361 ZNF277Q9NRM2 450 aaPredicted RBP21.97■■□□□ 1.11
PSEN1-224ENST00000559361 HTATSF1O43719 755 aaKnown RBP21.96■■□□□ 1.11
PSEN1-224ENST00000559361 EPHX2P34913 555 aa21.96■■□□□ 1.11
PSEN1-224ENST00000559361 LMOD3Q0VAK6 560 aa21.96■■□□□ 1.11
PSEN1-224ENST00000559361 EAPPQ56P03 285 aaPredicted RBP21.96■■□□□ 1.11
PSEN1-224ENST00000559361 CCDC146Q8IYE0 955 aa21.96■■□□□ 1.11
PSEN1-224ENST00000559361 RTKN2Q8IZC4 609 aa21.96■■□□□ 1.11
PSEN1-224ENST00000559361 PRAMEF22A3QJZ6 481 aa21.95■■□□□ 1.1
PSEN1-224ENST00000559361 PIP4K2AP48426 406 aaPredicted RBP21.95■■□□□ 1.1
PSEN1-224ENST00000559361 LBX1P52954 281 aa21.95■■□□□ 1.1
PSEN1-224ENST00000559361 OLFM4Q6UX06 510 aa21.95■■□□□ 1.1
PSEN1-224ENST00000559361 TPTE2Q6XPS3 522 aa21.95■■□□□ 1.1
PSEN1-224ENST00000559361 PNMA8AQ86V59 439 aaPredicted RBP21.95■■□□□ 1.1
PSEN1-224ENST00000559361 ZNF652Q9Y2D9 606 aa21.95■■□□□ 1.1
PSEN1-224ENST00000559361 SNED1Q8TER0 1413 aa21.95■■□□□ 1.1
PSEN1-224ENST00000559361 DEFB115Q30KQ5 88 aa21.94■■□□□ 1.1
PSEN1-224ENST00000559361 CNTROBQ8N137 903 aa21.94■■□□□ 1.1
PSEN1-224ENST00000559361 TMPOP42166 694 aaKnown RBP21.93■■□□□ 1.1
PSEN1-224ENST00000559361 CLEC11AQ9Y240 323 aa21.93■■□□□ 1.1
PSEN1-224ENST00000559361 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
PSEN1-224ENST00000559361 NBPF26B4DH59 902 aa21.92■■□□□ 1.1
PSEN1-224ENST00000559361 APAF1O14727 1248 aa21.92■■□□□ 1.1
PSEN1-224ENST00000559361 SNRPA1P09661 255 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms