RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 UBTFP17480 764 aaKnown RBP3.19□□□□□ -1.9
USP3-209ENST00000558925 SCNN1DP51172 638 aa3.19□□□□□ -1.9
USP3-209ENST00000558925 MCM6Q14566 821 aa3.19□□□□□ -1.9
USP3-209ENST00000558925 PNMA1Q8ND90 353 aa3.19□□□□□ -1.9
USP3-209ENST00000558925 AIDAQ96BJ3 306 aa3.19□□□□□ -1.9
USP3-209ENST00000558925 LENG1Q96BZ8 264 aaPredicted RBP3.19□□□□□ -1.9
USP3-209ENST00000558925 GOPCQ9HD26 462 aa3.19□□□□□ -1.9
USP3-209ENST00000558925 ADAMTS4O75173 837 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 SIN3BO75182 1162 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 MED26O95402 600 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 TAL1P17542 331 aaPredicted RBP3.18□□□□□ -1.9
USP3-209ENST00000558925 ALAS2P22557 587 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 GTF2E1P29083 439 aaPredicted RBP3.18□□□□□ -1.9
USP3-209ENST00000558925 RFC5P40937 340 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 ARSJQ5FYB0 599 aaPredicted RBP3.18□□□□□ -1.9
USP3-209ENST00000558925 ILDR2Q71H61 639 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 RAB44Q7Z6P3 723 aaPredicted RBP3.18□□□□□ -1.9
USP3-209ENST00000558925 C1orf216Q8TAB5 229 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 TNFRSF25Q93038 417 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 POM121Q96HA1 1249 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 KRTAP4-5Q9BYR2 181 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 MARK1Q9P0L2 795 aa3.18□□□□□ -1.9
USP3-209ENST00000558925 ATP1B4Q9UN42 357 aaPredicted RBP3.18□□□□□ -1.9
USP3-209ENST00000558925 IQSEC3Q9UPP2 1182 aaPredicted RBP3.18□□□□□ -1.9
USP3-209ENST00000558925 OAS3Q9Y6K5 1087 aaKnown RBP3.18□□□□□ -1.9
USP3-209ENST00000558925 SSTR4P31391 388 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 CD97P48960 835 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 JAG1P78504 1218 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 SFSWAPQ12872 951 aaKnown RBP3.17□□□□□ -1.9
USP3-209ENST00000558925 FLIIQ13045 1269 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 NR1H3Q13133 447 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 LAMC2Q13753 1193 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 ESCO1Q5FWF5 840 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 TRAPPC3LQ5T215 181 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 SAMD5Q5TGI4 173 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 ESF1Q9H501 851 aaKnown RBP3.17□□□□□ -1.9
USP3-209ENST00000558925 PCMTD2Q9NV79 361 aa3.17□□□□□ -1.9
USP3-209ENST00000558925 APBB1O00213 710 aa3.16□□□□□ -1.9
USP3-209ENST00000558925 SOCS7O14512 581 aa3.16□□□□□ -1.9
USP3-209ENST00000558925 MYCP01106 439 aaPredicted RBP3.16□□□□□ -1.9
USP3-209ENST00000558925 ADH7P40394 386 aa3.16□□□□□ -1.9
USP3-209ENST00000558925 MEGF10Q96KG7 1140 aa3.16□□□□□ -1.9
USP3-209ENST00000558925 NIFKQ9BYG3 293 aaKnown RBP3.16□□□□□ -1.9
USP3-209ENST00000558925 SNRKQ9NRH2 765 aa3.16□□□□□ -1.9
USP3-209ENST00000558925 CEP126Q9P2H0 1117 aa3.16□□□□□ -1.9
USP3-209ENST00000558925 RNF114Q9Y508 228 aa3.16□□□□□ -1.9
USP3-209ENST00000558925 PARP3Q9Y6F1 533 aa3.16□□□□□ -1.9
USP3-209ENST00000558925 INHAP05111 366 aa3.15□□□□□ -1.91
USP3-209ENST00000558925 NOS3P29474 1203 aa3.15□□□□□ -1.91
USP3-209ENST00000558925 TXLNAP40222 546 aa3.15□□□□□ -1.91
USP3-209ENST00000558925 IRAK1P51617 712 aa3.15□□□□□ -1.91
USP3-209ENST00000558925 FMR1NBQ8N0W7 255 aaPredicted RBP3.15□□□□□ -1.91
USP3-209ENST00000558925 C7orf43Q8WVR3 580 aa3.15□□□□□ -1.91
USP3-209ENST00000558925 A6NJR5 290 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 SMTNP53814 917 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 GDF10P55107 478 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 PRR23CQ6ZRP0 262 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 PHTF2Q8N3S3 785 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 CCDC82Q8N4S0 544 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 ZDHHC1Q8WTX9 485 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 WFDC12Q8WWY7 111 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 ZDHHC3Q9NYG2 299 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 USP21Q9UK80 565 aa3.14□□□□□ -1.91
USP3-209ENST00000558925 TMEM229AB2RXF0 380 aa3.13□□□□□ -1.91
USP3-209ENST00000558925 LILRB5O75023 590 aa3.13□□□□□ -1.91
USP3-209ENST00000558925 IREB2P48200 963 aaKnown RBP3.13□□□□□ -1.91
USP3-209ENST00000558925 AFF1P51825 1210 aaKnown RBP3.13□□□□□ -1.91
USP3-209ENST00000558925 GP2P55259 537 aaKnown RBP3.13□□□□□ -1.91
USP3-209ENST00000558925 MCCD1P59942 119 aaPredicted RBP3.13□□□□□ -1.91
USP3-209ENST00000558925 MTFR1Q15390 333 aa3.13□□□□□ -1.91
USP3-209ENST00000558925 NBPF1Q3BBV0 1214 aa3.13□□□□□ -1.91
USP3-209ENST00000558925 LRRC69Q6ZNQ3 347 aa3.13□□□□□ -1.91
USP3-209ENST00000558925 PROSER2Q86WR7 435 aaPredicted RBP3.13□□□□□ -1.91
USP3-209ENST00000558925 MTMR14Q8NCE2 650 aa3.13□□□□□ -1.91
USP3-209ENST00000558925 NAGPAQ9UK23 515 aa3.13□□□□□ -1.91
USP3-209ENST00000558925 ZNF777Q9ULD5 760 aaPredicted RBP3.13□□□□□ -1.91
USP3-209ENST00000558925 COG6Q9Y2V7 657 aa3.13□□□□□ -1.91
USP3-209ENST00000558925 KIAA1324LA8MWY0 1029 aaPredicted RBP3.12□□□□□ -1.91
USP3-209ENST00000558925 TATP17735 454 aaPredicted RBP3.12□□□□□ -1.91
USP3-209ENST00000558925 FSTP19883 344 aa3.12□□□□□ -1.91
USP3-209ENST00000558925 SPEM2Q0P670 501 aa3.12□□□□□ -1.91
USP3-209ENST00000558925 DMRTC2Q8IXT2 367 aaPredicted RBP3.12□□□□□ -1.91
USP3-209ENST00000558925 FNBP4Q8N3X1 1017 aaPredicted RBP3.12□□□□□ -1.91
USP3-209ENST00000558925 NUDT8Q8WV74 236 aa3.12□□□□□ -1.91
USP3-209ENST00000558925 SERTAD1Q9UHV2 236 aa3.12□□□□□ -1.91
USP3-209ENST00000558925 DOLKQ9UPQ8 538 aa3.12□□□□□ -1.91
USP3-209ENST00000558925 GJA3Q9Y6H8 435 aa3.12□□□□□ -1.91
USP3-209ENST00000558925 CDK2AP1O14519 115 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 TGFB1P01137 390 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 RAC1P63000 192 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 PLAURQ03405 335 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 USP4Q13107 963 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 OXLD1Q5BKU9 147 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 SH3PXD2AQ5TCZ1 1133 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 BICDL1Q6ZP65 573 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 SLC4A9Q96Q91 983 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 GDPD2Q9HCC8 539 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 JPH1Q9HDC5 661 aaPredicted RBP3.11□□□□□ -1.91
USP3-209ENST00000558925 CABP1Q9NZU7 370 aa3.11□□□□□ -1.91
USP3-209ENST00000558925 CHIC2Q9UKJ5 165 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms