RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 POLR3GLQ9BT43 218 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 BRIP1Q9BX63 1249 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 SLC52A2Q9HAB3 445 aa7.09□□□□□ -1.27
SPG11-208ENST00000558155 AFDNP55196 1824 aaKnown RBP7.08□□□□□ -1.28
SPG11-208ENST00000558155 ANKRD26Q9UPS8 1709 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 DICER1Q9UPY3 1922 aaKnown RBP7.08□□□□□ -1.28
SPG11-208ENST00000558155 TMEM88BA6NKF7 163 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 DDNO94850 711 aaPredicted RBP7.08□□□□□ -1.28
SPG11-208ENST00000558155 STARD3NLO95772 234 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 CANXP27824 592 aaKnown RBP7.08□□□□□ -1.28
SPG11-208ENST00000558155 VEGFBP49765 207 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 LBX1P52954 281 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 SLC39A6Q13433 755 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 SOGA3Q5TF21 947 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 NPM2Q86SE8 214 aaKnown RBP7.08□□□□□ -1.28
SPG11-208ENST00000558155 LDHDQ86WU2 507 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 VSIG10Q8N0Z9 540 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 TAOK3Q9H2K8 898 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 BCL2L12Q9HB09 334 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 BMP2KQ9NSY1 1161 aaPredicted RBP7.08□□□□□ -1.28
SPG11-208ENST00000558155 WBP1LQ9NX94 342 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 CNTNAP1P78357 1384 aa7.08□□□□□ -1.28
SPG11-208ENST00000558155 LTBP3Q9NS15 1303 aa7.07□□□□□ -1.28
SPG11-208ENST00000558155 NPHP1O15259 732 aa7.07□□□□□ -1.28
SPG11-208ENST00000558155 RNMTO43148 476 aaKnown RBP7.07□□□□□ -1.28
SPG11-208ENST00000558155 MAP2K1Q02750 393 aaPredicted RBP7.07□□□□□ -1.28
SPG11-208ENST00000558155 DEFB115Q30KQ5 88 aa7.07□□□□□ -1.28
SPG11-208ENST00000558155 MORC1Q86VD1 984 aa7.07□□□□□ -1.28
SPG11-208ENST00000558155 AEBP1Q8IUX7 1158 aa7.07□□□□□ -1.28
SPG11-208ENST00000558155 FAM163AQ96GL9 167 aaPredicted RBP7.07□□□□□ -1.28
SPG11-208ENST00000558155 TEX13AQ9BXU3 409 aaPredicted RBP7.07□□□□□ -1.28
SPG11-208ENST00000558155 LGR6Q9HBX8 967 aa7.07□□□□□ -1.28
SPG11-208ENST00000558155 PCDH10Q9P2E7 1040 aa7.07□□□□□ -1.28
SPG11-208ENST00000558155 ZBTB1Q9Y2K1 713 aa7.07□□□□□ -1.28
SPG11-208ENST00000558155 COL15A1P39059 1388 aa7.07□□□□□ -1.28
SPG11-208ENST00000558155 PASKQ96RG2 1323 aa7.06□□□□□ -1.28
SPG11-208ENST00000558155 ITGBL1O95965 494 aaPredicted RBP7.06□□□□□ -1.28
SPG11-208ENST00000558155 EIF5P55010 431 aaKnown RBP7.06□□□□□ -1.28
SPG11-208ENST00000558155 EAPPQ56P03 285 aaPredicted RBP7.06□□□□□ -1.28
SPG11-208ENST00000558155 TBC1D9BQ66K14 1250 aa7.06□□□□□ -1.28
SPG11-208ENST00000558155 STYK1Q6J9G0 422 aa7.06□□□□□ -1.28
SPG11-208ENST00000558155 TTC5Q8N0Z6 440 aa7.06□□□□□ -1.28
SPG11-208ENST00000558155 MASTLQ96GX5 879 aa7.06□□□□□ -1.28
SPG11-208ENST00000558155 ABHD8Q96I13 439 aa7.06□□□□□ -1.28
SPG11-208ENST00000558155 L3MBTL3Q96JM7 780 aaPredicted RBP7.06□□□□□ -1.28
SPG11-208ENST00000558155 SETDB2Q96T68 719 aa7.06□□□□□ -1.28
SPG11-208ENST00000558155 BEGAINQ9BUH8 593 aa7.06□□□□□ -1.28
SPG11-208ENST00000558155 TAF1DQ9H5J8 278 aaPredicted RBP7.06□□□□□ -1.28
SPG11-208ENST00000558155 DLEC1Q9Y238 1755 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 FER1L6Q2WGJ9 1857 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 TJP1Q07157 1748 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 TIAM2Q8IVF5 1701 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 NRXN2Q9P2S2 1712 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 ST5P78524 1137 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 MLLT1Q03111 559 aaPredicted RBP7.05□□□□□ -1.28
SPG11-208ENST00000558155 FAM161AQ3B820 660 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 PRR5LQ6MZQ0 368 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 MAMSTRQ6ZN01 415 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 PNMA8AQ86V59 439 aaPredicted RBP7.05□□□□□ -1.28
SPG11-208ENST00000558155 PANK3Q9H999 370 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 HACL1Q9UJ83 578 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 ADAMTS7Q9UKP4 1686 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 SCN11AQ9UI33 1791 aa7.05□□□□□ -1.28
SPG11-208ENST00000558155 SCN4AP35499 1836 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 RASSF10A6NK89 507 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 CCDC85CA6NKD9 419 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 SRGNP10124 158 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 HSPA8P11142 646 aaKnown RBP7.04□□□□□ -1.28
SPG11-208ENST00000558155 EPHX2P34913 555 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 IL13P35225 146 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 PRPF40BQ6NWY9 871 aaKnown RBP7.04□□□□□ -1.28
SPG11-208ENST00000558155 CNTROBQ8N137 903 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 CCDC24Q8N4L8 307 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 CNBD1Q8NA66 436 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 ABT1Q9ULW3 272 aaKnown RBP7.04□□□□□ -1.28
SPG11-208ENST00000558155 TBC1D2BQ9UPU7 963 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 COLQQ9Y215 455 aaPredicted RBP7.04□□□□□ -1.28
SPG11-208ENST00000558155 ZNF330Q9Y3S2 320 aaPredicted RBP7.04□□□□□ -1.28
SPG11-208ENST00000558155 CARMIL3Q8ND23 1372 aa7.04□□□□□ -1.28
SPG11-208ENST00000558155 WDR33Q9C0J8 1336 aaKnown RBP7.03□□□□□ -1.28
SPG11-208ENST00000558155 MAP3K13O43283 966 aa7.03□□□□□ -1.28
SPG11-208ENST00000558155 IL6STP40189 918 aaPredicted RBP7.03□□□□□ -1.28
SPG11-208ENST00000558155 ECE1P42892 770 aa7.03□□□□□ -1.28
SPG11-208ENST00000558155 RGS19P49795 217 aa7.03□□□□□ -1.28
SPG11-208ENST00000558155 CCDC93Q567U6 631 aa7.03□□□□□ -1.28
SPG11-208ENST00000558155 RTKN2Q8IZC4 609 aa7.03□□□□□ -1.28
SPG11-208ENST00000558155 KNSTRNQ9Y448 316 aa7.03□□□□□ -1.28
SPG11-208ENST00000558155 VIRMAQ69YN4 1812 aaKnown RBP7.02□□□□□ -1.29
SPG11-208ENST00000558155 SLX4Q8IY92 1834 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 HMOX1P09601 288 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 NPR1P16066 1061 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 ALDH1B1P30837 517 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 FKBP4Q02790 459 aaKnown RBP eCLIP7.02□□□□□ -1.29
SPG11-208ENST00000558155 TEFQ10587 303 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 MTHFSDQ2M296 383 aaKnown RBP7.02□□□□□ -1.29
SPG11-208ENST00000558155 MAP1SQ66K74 1059 aaPredicted RBP7.02□□□□□ -1.29
SPG11-208ENST00000558155 TPTE2Q6XPS3 522 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 RASEFQ8IZ41 740 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 SYNE4Q8N205 404 aa7.02□□□□□ -1.29
SPG11-208ENST00000558155 C7orf43Q8WVR3 580 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 238.6 ms