RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ACEP12821 1306 aa13.91□□□□□ -0.18
NEK9-210ENST00000557026 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
NEK9-210ENST00000557026 SSBP05455 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
NEK9-210ENST00000557026 FLAD1Q8NFF5 587 aa13.91□□□□□ -0.18
NEK9-210ENST00000557026 KRT23Q9C075 422 aa13.91□□□□□ -0.18
NEK9-210ENST00000557026 FOSBP53539 338 aa13.91□□□□□ -0.18
NEK9-210ENST00000557026 FAM114A1Q8IWE2 563 aa13.91□□□□□ -0.18
NEK9-210ENST00000557026 TNPO1Q92973 898 aaKnown RBP13.91□□□□□ -0.18
NEK9-210ENST00000557026 SPATA32Q96LK8 384 aa13.91□□□□□ -0.18
NEK9-210ENST00000557026 CWC15Q9P013 229 aaKnown RBP13.91□□□□□ -0.18
NEK9-210ENST00000557026 MAST3O60307 1309 aa13.91□□□□□ -0.18
NEK9-210ENST00000557026 LDHAL6AQ6ZMR3 332 aa13.91□□□□□ -0.18
NEK9-210ENST00000557026 EIF2AK4Q9P2K8 1649 aaKnown RBP13.9□□□□□ -0.18
NEK9-210ENST00000557026 ZFYVE9O95405 1425 aa13.9□□□□□ -0.18
NEK9-210ENST00000557026 GBP2P32456 591 aaPredicted RBP13.9□□□□□ -0.18
NEK9-210ENST00000557026 CALML4Q96GE6 196 aa13.9□□□□□ -0.18
NEK9-210ENST00000557026 DRC1Q96MC2 740 aa13.9□□□□□ -0.18
NEK9-210ENST00000557026 ARHGEF10O15013 1369 aa13.9□□□□□ -0.18
NEK9-210ENST00000557026 CAVIN2O95810 425 aa13.9□□□□□ -0.18
NEK9-210ENST00000557026 NBPF7P0C2Y1 421 aaPredicted RBP13.9□□□□□ -0.18
NEK9-210ENST00000557026 SSRP1Q08945 709 aaKnown RBP13.9□□□□□ -0.18
NEK9-210ENST00000557026 ZNF622Q969S3 477 aaKnown RBP eCLIP13.9□□□□□ -0.18
NEK9-210ENST00000557026 RTCBQ9Y3I0 505 aaKnown RBP13.9□□□□□ -0.18
NEK9-210ENST00000557026 NME9Q86XW9 330 aa13.9□□□□□ -0.18
NEK9-210ENST00000557026 LMTK3Q96Q04 1460 aa13.9□□□□□ -0.18
NEK9-210ENST00000557026 ECHDC1Q9NTX5 307 aa13.9□□□□□ -0.18
NEK9-210ENST00000557026 TCP11L1Q9NUJ3 509 aa13.9□□□□□ -0.18
NEK9-210ENST00000557026 GOLGA6L7A0A1B0GV03 622 aa13.89□□□□□ -0.19
NEK9-210ENST00000557026 KAT14Q9H8E8 782 aa13.89□□□□□ -0.19
NEK9-210ENST00000557026 CALM1P0DP23 149 aa13.89□□□□□ -0.19
NEK9-210ENST00000557026 CALM2P0DP24 149 aa13.89□□□□□ -0.19
NEK9-210ENST00000557026 CALM3P0DP25 149 aa13.89□□□□□ -0.19
NEK9-210ENST00000557026 PARP10Q53GL7 1025 aa13.89□□□□□ -0.19
NEK9-210ENST00000557026 PCDH11XQ9BZA7 1347 aa13.89□□□□□ -0.19
NEK9-210ENST00000557026 PCDH11YQ9BZA8 1340 aa13.89□□□□□ -0.19
NEK9-210ENST00000557026 NKTRP30414 1462 aaKnown RBP13.89□□□□□ -0.19
NEK9-210ENST00000557026 NCBP1Q09161 790 aaKnown RBP13.89□□□□□ -0.19
NEK9-210ENST00000557026 FLT4P35916 1363 aa13.89□□□□□ -0.19
NEK9-210ENST00000557026 EIF4G3O43432 1585 aaKnown RBP13.89□□□□□ -0.19
NEK9-210ENST00000557026 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
NEK9-210ENST00000557026 MCM3P25205 808 aa13.88□□□□□ -0.19
NEK9-210ENST00000557026 FMNL3Q8IVF7 1028 aa13.88□□□□□ -0.19
NEK9-210ENST00000557026 FLIIQ13045 1269 aa13.88□□□□□ -0.19
NEK9-210ENST00000557026 UTP14AQ9BVJ6 771 aaKnown RBP13.88□□□□□ -0.19
NEK9-210ENST00000557026 MINDY4BA8MYZ0 360 aa13.88□□□□□ -0.19
NEK9-210ENST00000557026 NEFHP12036 1026 aa13.88□□□□□ -0.19
NEK9-210ENST00000557026 IL15P40933 162 aaPredicted RBP13.88□□□□□ -0.19
NEK9-210ENST00000557026 NASPP49321 788 aaPredicted RBP13.88□□□□□ -0.19
NEK9-210ENST00000557026 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
NEK9-210ENST00000557026 DCAF5Q96JK2 942 aa13.88□□□□□ -0.19
NEK9-210ENST00000557026 GBP3Q9H0R5 595 aa13.88□□□□□ -0.19
NEK9-210ENST00000557026 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
NEK9-210ENST00000557026 UGGT2Q9NYU1 1516 aa13.87□□□□□ -0.19
NEK9-210ENST00000557026 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
NEK9-210ENST00000557026 ANKRD13DQ6ZTN6 518 aa13.87□□□□□ -0.19
NEK9-210ENST00000557026 GPATCH8Q9UKJ3 1502 aaKnown RBP13.87□□□□□ -0.19
NEK9-210ENST00000557026 ANKRD62A6NC57 917 aa13.87□□□□□ -0.19
NEK9-210ENST00000557026 EIF3JO75822 258 aaKnown RBP13.87□□□□□ -0.19
NEK9-210ENST00000557026 HOOK3Q86VS8 718 aa13.86□□□□□ -0.19
NEK9-210ENST00000557026 NUP62CLQ9H1M0 184 aa13.86□□□□□ -0.19
NEK9-210ENST00000557026 WDR78Q5VTH9 848 aa13.86□□□□□ -0.19
NEK9-210ENST00000557026 C8orf76Q96K31 380 aa13.86□□□□□ -0.19
NEK9-210ENST00000557026 GLT8D2Q9H1C3 349 aa13.86□□□□□ -0.19
NEK9-210ENST00000557026 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
NEK9-210ENST00000557026 RBM17Q96I25 401 aaKnown RBP13.86□□□□□ -0.19
NEK9-210ENST00000557026 STK24Q9Y6E0 443 aa13.86□□□□□ -0.19
NEK9-210ENST00000557026 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
NEK9-210ENST00000557026 FIBPO43427 364 aa13.86□□□□□ -0.19
NEK9-210ENST00000557026 RANBP6O60518 1105 aaKnown RBP13.86□□□□□ -0.19
NEK9-210ENST00000557026 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
NEK9-210ENST00000557026 ADGRF5Q8IZF2 1346 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
NEK9-210ENST00000557026 PNMA2Q9UL42 364 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 BCAR3O75815 825 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 NLRP5P59047 1200 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 BRDTQ58F21 947 aaPredicted RBP13.85□□□□□ -0.19
NEK9-210ENST00000557026 NCOA7Q8NI08 942 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 UPF3BQ9BZI7 483 aaKnown RBP13.85□□□□□ -0.19
NEK9-210ENST00000557026 ZC3H12CQ9C0D7 883 aaKnown RBP13.85□□□□□ -0.19
NEK9-210ENST00000557026 ANO10Q9NW15 660 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 ABCC2Q92887 1545 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 ATP10AO60312 1499 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 KCNA6P17658 529 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 CASTP20810 708 aaKnown RBP13.85□□□□□ -0.19
NEK9-210ENST00000557026 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 CEBPAP49715 358 aaPredicted RBP13.85□□□□□ -0.19
NEK9-210ENST00000557026 SPA17Q15506 151 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 MFSD6Q6ZSS7 791 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 RMND1Q9NWS8 449 aa13.85□□□□□ -0.19
NEK9-210ENST00000557026 ESR2Q92731 530 aa13.84□□□□□ -0.19
NEK9-210ENST00000557026 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
NEK9-210ENST00000557026 CCDC91Q7Z6B0 441 aa13.84□□□□□ -0.19
NEK9-210ENST00000557026 TSPY2A6NKD2 308 aa13.84□□□□□ -0.19
NEK9-210ENST00000557026 LRRFIP2Q9Y608 721 aaKnown RBP13.84□□□□□ -0.19
NEK9-210ENST00000557026 GOLIM4O00461 696 aa13.83□□□□□ -0.19
NEK9-210ENST00000557026 MCM10Q7L590 875 aa13.83□□□□□ -0.19
NEK9-210ENST00000557026 ATP10BO94823 1461 aa13.83□□□□□ -0.2
NEK9-210ENST00000557026 HOXB7P09629 217 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms