RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 FOXN1O15353 648 aa14.54□□□□□ -0.08
CHGA-205ENST00000556098 PDE6BP35913 854 aa14.54□□□□□ -0.08
CHGA-205ENST00000556098 EAPPQ56P03 285 aaPredicted RBP14.54□□□□□ -0.08
CHGA-205ENST00000556098 TAOK3Q9H2K8 898 aa14.54□□□□□ -0.08
CHGA-205ENST00000556098 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
CHGA-205ENST00000556098 A0A087WZG4 1122 aa14.53□□□□□ -0.08
CHGA-205ENST00000556098 STARD3NLO95772 234 aa14.53□□□□□ -0.08
CHGA-205ENST00000556098 MTHFSDQ2M296 383 aaKnown RBP14.53□□□□□ -0.08
CHGA-205ENST00000556098 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
CHGA-205ENST00000556098 ST5P78524 1137 aa14.52□□□□□ -0.09
CHGA-205ENST00000556098 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
CHGA-205ENST00000556098 PRR5LQ6MZQ0 368 aa14.52□□□□□ -0.09
CHGA-205ENST00000556098 CNBD1Q8NA66 436 aa14.52□□□□□ -0.09
CHGA-205ENST00000556098 TRPM7Q96QT4 1865 aa14.52□□□□□ -0.09
CHGA-205ENST00000556098 TEFQ10587 303 aa14.51□□□□□ -0.09
CHGA-205ENST00000556098 BRIP1Q9BX63 1249 aa14.51□□□□□ -0.09
CHGA-205ENST00000556098 GTF3C3Q9Y5Q9 886 aa14.51□□□□□ -0.09
CHGA-205ENST00000556098 PIP4K2AP48426 406 aaPredicted RBP14.5□□□□□ -0.09
CHGA-205ENST00000556098 PRPF40BQ6NWY9 871 aaKnown RBP14.5□□□□□ -0.09
CHGA-205ENST00000556098 SETDB2Q96T68 719 aa14.5□□□□□ -0.09
CHGA-205ENST00000556098 CNTNAP1P78357 1384 aa14.49□□□□□ -0.09
CHGA-205ENST00000556098 FAM177BA6PVY3 158 aa14.49□□□□□ -0.09
CHGA-205ENST00000556098 U2SURPO15042 1029 aaKnown RBP14.49□□□□□ -0.09
CHGA-205ENST00000556098 EIF5P55010 431 aaKnown RBP14.49□□□□□ -0.09
CHGA-205ENST00000556098 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
CHGA-205ENST00000556098 CNKSR1Q969H4 720 aa14.49□□□□□ -0.09
CHGA-205ENST00000556098 COL3A1P02461 1466 aaPredicted RBP14.49□□□□□ -0.09
CHGA-205ENST00000556098 IQCA1LA6NCM1 817 aa14.48□□□□□ -0.09
CHGA-205ENST00000556098 DIAPH1O60610 1272 aaKnown RBP14.48□□□□□ -0.09
CHGA-205ENST00000556098 A1BGP04217 495 aa14.48□□□□□ -0.09
CHGA-205ENST00000556098 NEFLP07196 543 aa14.48□□□□□ -0.09
CHGA-205ENST00000556098 GRM1Q13255 1194 aa14.48□□□□□ -0.09
CHGA-205ENST00000556098 PAXIP1Q6ZW49 1069 aaPredicted RBP14.48□□□□□ -0.09
CHGA-205ENST00000556098 ZNF496Q96IT1 587 aaPredicted RBP14.48□□□□□ -0.09
CHGA-205ENST00000556098 NUP98P52948 1817 aa14.48□□□□□ -0.09
CHGA-205ENST00000556098 HEG1Q9ULI3 1381 aa14.47□□□□□ -0.09
CHGA-205ENST00000556098 CTCFP49711 727 aaPredicted RBP14.47□□□□□ -0.09
CHGA-205ENST00000556098 VEGFBP49765 207 aa14.47□□□□□ -0.09
CHGA-205ENST00000556098 LBX1P52954 281 aa14.47□□□□□ -0.09
CHGA-205ENST00000556098 LDHDQ86WU2 507 aa14.47□□□□□ -0.09
CHGA-205ENST00000556098 PDZRN3Q9UPQ7 1066 aa14.47□□□□□ -0.09
CHGA-205ENST00000556098 NUDCQ9Y266 331 aa14.47□□□□□ -0.09
CHGA-205ENST00000556098 ZNF541Q9H0D2 1346 aa14.46□□□□□ -0.09
CHGA-205ENST00000556098 TMEM88BA6NKF7 163 aa14.46□□□□□ -0.09
CHGA-205ENST00000556098 STYK1Q6J9G0 422 aa14.46□□□□□ -0.09
CHGA-205ENST00000556098 NBPF5PQ86XG9 351 aaPredicted RBP14.46□□□□□ -0.09
CHGA-205ENST00000556098 DZIP3Q86Y13 1208 aaKnown RBP14.46□□□□□ -0.09
CHGA-205ENST00000556098 MASTLQ96GX5 879 aa14.46□□□□□ -0.09
CHGA-205ENST00000556098 PNNQ9H307 717 aaKnown RBP14.46□□□□□ -0.09
CHGA-205ENST00000556098 TAF1DQ9H5J8 278 aaPredicted RBP14.46□□□□□ -0.09
CHGA-205ENST00000556098 ZNF277Q9NRM2 450 aaPredicted RBP14.46□□□□□ -0.09
CHGA-205ENST00000556098 ABT1Q9ULW3 272 aaKnown RBP14.46□□□□□ -0.09
CHGA-205ENST00000556098 LAMB4A4D0S4 1761 aa14.46□□□□□ -0.09
CHGA-205ENST00000556098 ADAMTSL1Q8N6G6 1762 aa14.46□□□□□ -0.09
CHGA-205ENST00000556098 LTBP3Q9NS15 1303 aa14.45□□□□□ -0.1
CHGA-205ENST00000556098 CCDC93Q567U6 631 aa14.45□□□□□ -0.1
CHGA-205ENST00000556098 SOGA3Q5TF21 947 aa14.45□□□□□ -0.1
CHGA-205ENST00000556098 ERICH6BQ5W0A0 696 aa14.45□□□□□ -0.1
CHGA-205ENST00000556098 ZNF790Q6PG37 636 aa14.45□□□□□ -0.1
CHGA-205ENST00000556098 OLFM4Q6UX06 510 aa14.45□□□□□ -0.1
CHGA-205ENST00000556098 ADAMTS8Q9UP79 889 aa14.45□□□□□ -0.1
CHGA-205ENST00000556098 RNF123Q5XPI4 1314 aa14.44□□□□□ -0.1
CHGA-205ENST00000556098 GNAT3A8MTJ3 354 aa14.44□□□□□ -0.1
CHGA-205ENST00000556098 SRGNP10124 158 aa14.44□□□□□ -0.1
CHGA-205ENST00000556098 IL6STP40189 918 aaPredicted RBP14.44□□□□□ -0.1
CHGA-205ENST00000556098 MAP1SQ66K74 1059 aaPredicted RBP14.44□□□□□ -0.1
CHGA-205ENST00000556098 FMNL2Q96PY5 1086 aa14.44□□□□□ -0.1
CHGA-205ENST00000556098 TEX13AQ9BXU3 409 aaPredicted RBP14.44□□□□□ -0.1
CHGA-205ENST00000556098 DLG5Q8TDM6 1919 aa14.44□□□□□ -0.1
CHGA-205ENST00000556098 CAMTA2O94983 1202 aa14.43□□□□□ -0.1
CHGA-205ENST00000556098 EPHX2P34913 555 aa14.43□□□□□ -0.1
CHGA-205ENST00000556098 CFAP44Q96MT7 982 aa14.43□□□□□ -0.1
CHGA-205ENST00000556098 PRDM10Q9NQV6 1147 aa14.43□□□□□ -0.1
CHGA-205ENST00000556098 HACL1Q9UJ83 578 aa14.43□□□□□ -0.1
CHGA-205ENST00000556098 GJA3Q9Y6H8 435 aa14.43□□□□□ -0.1
CHGA-205ENST00000556098 PASKQ96RG2 1323 aa14.42□□□□□ -0.1
CHGA-205ENST00000556098 CASP8AP2Q9UKL3 1982 aa14.42□□□□□ -0.1
CHGA-205ENST00000556098 BTBD11A6QL63 1104 aa14.42□□□□□ -0.1
CHGA-205ENST00000556098 KCNQ3O43525 872 aa14.42□□□□□ -0.1
CHGA-205ENST00000556098 GTF2E1P29083 439 aaPredicted RBP14.42□□□□□ -0.1
CHGA-205ENST00000556098 DEFB115Q30KQ5 88 aa14.42□□□□□ -0.1
CHGA-205ENST00000556098 FAM161AQ3B820 660 aa14.42□□□□□ -0.1
CHGA-205ENST00000556098 IL17REQ8NFR9 667 aa14.42□□□□□ -0.1
CHGA-205ENST00000556098 GAS2L2Q8NHY3 880 aa14.42□□□□□ -0.1
CHGA-205ENST00000556098 FKBP4Q02790 459 aaKnown RBP eCLIP14.41□□□□□ -0.1
CHGA-205ENST00000556098 LTBP1Q14766 1721 aa14.41□□□□□ -0.1
CHGA-205ENST00000556098 PRAMEF22A3QJZ6 481 aa14.4□□□□□ -0.1
CHGA-205ENST00000556098 CCDC85CA6NKD9 419 aa14.4□□□□□ -0.1
CHGA-205ENST00000556098 NPR1P16066 1061 aa14.4□□□□□ -0.1
CHGA-205ENST00000556098 RUNDC1Q96C34 613 aa14.4□□□□□ -0.1
CHGA-205ENST00000556098 NIP7Q9Y221 180 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHGA-205ENST00000556098 ZNF652Q9Y2D9 606 aa14.4□□□□□ -0.1
CHGA-205ENST00000556098 TCERG1O14776 1098 aaKnown RBP14.39□□□□□ -0.11
CHGA-205ENST00000556098 HSPA8P11142 646 aaKnown RBP14.39□□□□□ -0.11
CHGA-205ENST00000556098 CNTROBQ8N137 903 aa14.39□□□□□ -0.11
CHGA-205ENST00000556098 ABHD8Q96I13 439 aa14.39□□□□□ -0.11
CHGA-205ENST00000556098 L3MBTL3Q96JM7 780 aaPredicted RBP14.39□□□□□ -0.11
CHGA-205ENST00000556098 USP16Q9Y5T5 823 aa14.39□□□□□ -0.11
CHGA-205ENST00000556098 WDR33Q9C0J8 1336 aaKnown RBP14.39□□□□□ -0.11
CHGA-205ENST00000556098 ITGBL1O95965 494 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms