RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 NPHP4O75161 1426 aaPredicted RBP12.82□□□□□ -0.36
MTHFD1-210ENST00000555252 BTBD11A6QL63 1104 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 GOLGA6L6A8MZA4 724 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 KDM4AO75164 1064 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 ADCY5O95622 1261 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 CHMLP26374 656 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 UBE2HP62256 183 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 TAF3Q5VWG9 929 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 ARHGEF25Q86VW2 580 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 DNAAF4Q8WXU2 420 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 FEZ1Q99689 392 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 PHAXQ9H814 394 aaKnown RBP12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 USP48Q86UV5 1035 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 KIF1BPQ96EK5 621 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 LGR6Q9HBX8 967 aa12.81□□□□□ -0.36
MTHFD1-210ENST00000555252 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
MTHFD1-210ENST00000555252 GCP02774 474 aa12.8□□□□□ -0.36
MTHFD1-210ENST00000555252 BEND3Q5T5X7 828 aa12.8□□□□□ -0.36
MTHFD1-210ENST00000555252 ANKRD7Q92527 254 aa12.8□□□□□ -0.36
MTHFD1-210ENST00000555252 DBF4Q9UBU7 674 aaPredicted RBP12.8□□□□□ -0.36
MTHFD1-210ENST00000555252 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 CTIFO43310 598 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 PDIA4P13667 645 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 EIF2S2P20042 333 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 PPP1R42Q7Z4L9 355 aa12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 KIAA1524Q8TCG1 905 aa12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 MST1RQ04912 1400 aa12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 CAMTA1Q9Y6Y1 1673 aa12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 SURF6O75683 361 aaKnown RBP12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 ALDH1L1O75891 902 aa12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 RHPN1Q8TCX5 695 aa12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 RILPL2Q969X0 211 aa12.79□□□□□ -0.36
MTHFD1-210ENST00000555252 CRYBG1Q9Y4K1 1723 aa12.78□□□□□ -0.36
MTHFD1-210ENST00000555252 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
MTHFD1-210ENST00000555252 FUCA2Q9BTY2 467 aa12.78□□□□□ -0.36
MTHFD1-210ENST00000555252 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
MTHFD1-210ENST00000555252 KIF1AQ12756 1690 aa12.78□□□□□ -0.36
MTHFD1-210ENST00000555252 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.36
MTHFD1-210ENST00000555252 SRGAP3O43295 1099 aa12.77□□□□□ -0.36
MTHFD1-210ENST00000555252 MTX1Q13505 466 aa12.77□□□□□ -0.36
MTHFD1-210ENST00000555252 PPP4R3BQ5MIZ7 849 aa12.77□□□□□ -0.36
MTHFD1-210ENST00000555252 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.36
MTHFD1-210ENST00000555252 SETD1BQ9UPS6 1966 aaKnown RBP12.77□□□□□ -0.36
MTHFD1-210ENST00000555252 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.36
MTHFD1-210ENST00000555252 HEG1Q9ULI3 1381 aa12.77□□□□□ -0.37
MTHFD1-210ENST00000555252 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
MTHFD1-210ENST00000555252 GADD45BO75293 160 aaPredicted RBP12.77□□□□□ -0.37
MTHFD1-210ENST00000555252 ZSCAN22P10073 491 aaPredicted RBP12.77□□□□□ -0.37
MTHFD1-210ENST00000555252 ANKRD24Q8TF21 1146 aa12.77□□□□□ -0.37
MTHFD1-210ENST00000555252 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.77□□□□□ -0.37
MTHFD1-210ENST00000555252 HSPA4P34932 840 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 HSPA2P54652 639 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 MPRIPQ6WCQ1 1025 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 LRRC59Q96AG4 307 aaKnown RBP12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 CHAMP1Q96JM3 812 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 ANO2Q9NQ90 1003 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 PRDM10Q9NQV6 1147 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 TTC41PQ6P2S7 1318 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 ADCY9O60503 1353 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 FOXD4L5Q5VV16 416 aaPredicted RBP12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 TSHZ3Q63HK5 1081 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 CNTROBQ8N137 903 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 FOXD4L4Q8WXT5 416 aaPredicted RBP12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 TTC12Q9H892 705 aaPredicted RBP12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 HYPKQ9NX55 129 aa12.76□□□□□ -0.37
MTHFD1-210ENST00000555252 TRPM3Q9HCF6 1732 aaPredicted RBP12.75□□□□□ -0.37
MTHFD1-210ENST00000555252 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
MTHFD1-210ENST00000555252 RGPD2P0DJD1 1756 aa12.75□□□□□ -0.37
MTHFD1-210ENST00000555252 GIGYF1O75420 1035 aaPredicted RBP12.75□□□□□ -0.37
MTHFD1-210ENST00000555252 HCLS1P14317 486 aaPredicted RBP12.75□□□□□ -0.37
MTHFD1-210ENST00000555252 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
MTHFD1-210ENST00000555252 IL1RAPL2Q9NP60 686 aa12.75□□□□□ -0.37
MTHFD1-210ENST00000555252 PALD1Q9ULE6 856 aa12.75□□□□□ -0.37
MTHFD1-210ENST00000555252 ADAMTS7Q9UKP4 1686 aa12.75□□□□□ -0.37
MTHFD1-210ENST00000555252 KCNQ3O43525 872 aa12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 DDX58O95786 925 aaKnown RBP12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 NBPF7P0C2Y1 421 aaPredicted RBP12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 KRT28Q7Z3Y7 464 aa12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 ORAI2Q96SN7 254 aa12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 ZHX1Q9UKY1 873 aaPredicted RBP12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 CBX1P83916 185 aa12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 ATP2B3Q16720 1220 aa12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 OGFRQ9NZT2 677 aa12.74□□□□□ -0.37
MTHFD1-210ENST00000555252 STX6O43752 255 aa12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 GLRX3O76003 335 aaKnown RBP12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 F13A1P00488 732 aa12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 GABPB1Q06547 395 aaPredicted RBP12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 GPATCH3Q96I76 525 aa12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 C9orf78Q9NZ63 289 aaPredicted RBP12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 PXDNQ92626 1479 aa12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 RIOK3O14730 519 aaKnown RBP12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 CCDC192P0DO97 292 aa12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 UNC5CLQ8IV45 518 aa12.73□□□□□ -0.37
MTHFD1-210ENST00000555252 CLASRPQ8N2M8 674 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms