RNA–Protein interactions for RNA: ENST00000554539.5

HNRNPC-212, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-212ENST00000554539 TEFQ10587 303 aa11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 ZNF790Q6PG37 636 aa11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 NPM2Q86SE8 214 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 MASTLQ96GX5 879 aa11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 PRDM10Q9NQV6 1147 aa11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 WBP1LQ9NX94 342 aa11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 TSKSQ9UJT2 592 aa11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 USP16Q9Y5T5 823 aa11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
HNRNPC-212ENST00000554539 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 IQCA1LA6NCM1 817 aa11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 EPHX2P34913 555 aa11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 DEFB115Q30KQ5 88 aa11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 STYK1Q6J9G0 422 aa11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 SLC51AQ86UW1 340 aa11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 NBPF5PQ86XG9 351 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 DZIP3Q86Y13 1208 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 CNTROBQ8N137 903 aa11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 ABHD8Q96I13 439 aa11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 ABT1Q9ULW3 272 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 COL11A2P13942 1736 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
HNRNPC-212ENST00000554539 CCDC85CA6NKD9 419 aa11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 TCERG1O14776 1098 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 HSPA8P11142 646 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 IL6STP40189 918 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 SYNE4Q8N205 404 aa11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 C7orf43Q8WVR3 580 aa11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 HACL1Q9UJ83 578 aa11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 GJA3Q9Y6H8 435 aa11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 CACNA1SQ13698 1873 aa11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 FER1L6Q2WGJ9 1857 aa11.53□□□□□ -0.56
HNRNPC-212ENST00000554539 PCNTO95613 3336 aa11.52□□□□□ -0.56
HNRNPC-212ENST00000554539 CCDC93Q567U6 631 aa11.52□□□□□ -0.57
HNRNPC-212ENST00000554539 NGEFQ8N5V2 710 aa11.52□□□□□ -0.57
HNRNPC-212ENST00000554539 FMNL2Q96PY5 1086 aa11.52□□□□□ -0.57
HNRNPC-212ENST00000554539 PDZRN3Q9UPQ7 1066 aa11.52□□□□□ -0.57
HNRNPC-212ENST00000554539 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-212ENST00000554539 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.57
HNRNPC-212ENST00000554539 MRC1P22897 1456 aa11.51□□□□□ -0.57
HNRNPC-212ENST00000554539 BTBD11A6QL63 1104 aa11.51□□□□□ -0.57
HNRNPC-212ENST00000554539 GNAT3A8MTJ3 354 aa11.51□□□□□ -0.57
HNRNPC-212ENST00000554539 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-212ENST00000554539 PHACTR3Q96KR7 559 aa11.51□□□□□ -0.57
HNRNPC-212ENST00000554539 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
HNRNPC-212ENST00000554539 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
HNRNPC-212ENST00000554539 SLC34A2O95436 690 aa11.5□□□□□ -0.57
HNRNPC-212ENST00000554539 NPR1P16066 1061 aa11.5□□□□□ -0.57
HNRNPC-212ENST00000554539 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
HNRNPC-212ENST00000554539 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-212ENST00000554539 CYP4F22Q6NT55 531 aa11.5□□□□□ -0.57
HNRNPC-212ENST00000554539 NIP7Q9Y221 180 aaKnown RBP eCLIP11.5□□□□□ -0.57
HNRNPC-212ENST00000554539 DICER1Q9UPY3 1922 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-212ENST00000554539 VIRMAQ69YN4 1812 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-212ENST00000554539 TRAF5O00463 557 aa11.49□□□□□ -0.57
HNRNPC-212ENST00000554539 AOC2O75106 756 aa11.49□□□□□ -0.57
HNRNPC-212ENST00000554539 IARSP41252 1262 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-212ENST00000554539 DCTN1Q14203 1278 aa11.49□□□□□ -0.57
HNRNPC-212ENST00000554539 HLFQ16534 295 aa11.49□□□□□ -0.57
HNRNPC-212ENST00000554539 SOGA3Q5TF21 947 aa11.49□□□□□ -0.57
HNRNPC-212ENST00000554539 NUTM1Q86Y26 1132 aa11.49□□□□□ -0.57
HNRNPC-212ENST00000554539 MIS18AQ9NYP9 233 aa11.49□□□□□ -0.57
HNRNPC-212ENST00000554539 RASSF10A6NK89 507 aa11.48□□□□□ -0.57
HNRNPC-212ENST00000554539 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
HNRNPC-212ENST00000554539 GTF2E1P29083 439 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-212ENST00000554539 EPS15P42566 896 aa11.48□□□□□ -0.57
HNRNPC-212ENST00000554539 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-212ENST00000554539 MCM10Q7L590 875 aa11.48□□□□□ -0.57
HNRNPC-212ENST00000554539 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
HNRNPC-212ENST00000554539 DDX21Q9NR30 783 aaKnown RBP eCLIP11.48□□□□□ -0.57
HNRNPC-212ENST00000554539 FZD9O00144 591 aa11.47□□□□□ -0.57
HNRNPC-212ENST00000554539 TPTE2Q6XPS3 522 aa11.47□□□□□ -0.57
HNRNPC-212ENST00000554539 GAS2L2Q8NHY3 880 aa11.47□□□□□ -0.57
HNRNPC-212ENST00000554539 CAPNS2Q96L46 248 aa11.47□□□□□ -0.57
HNRNPC-212ENST00000554539 KIF7Q2M1P5 1343 aa11.46□□□□□ -0.57
HNRNPC-212ENST00000554539 PRKAR2BP31323 418 aa11.46□□□□□ -0.57
HNRNPC-212ENST00000554539 CST9Q5W186 159 aa11.46□□□□□ -0.57
HNRNPC-212ENST00000554539 PNMA8AQ86V59 439 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-212ENST00000554539 RTKN2Q8IZC4 609 aa11.46□□□□□ -0.57
HNRNPC-212ENST00000554539 JDP2Q8WYK2 163 aa11.46□□□□□ -0.57
HNRNPC-212ENST00000554539 GPR101Q96P66 508 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-212ENST00000554539 TIMELESSQ9UNS1 1208 aa11.46□□□□□ -0.57
HNRNPC-212ENST00000554539 UBR2Q8IWV8 1755 aa11.46□□□□□ -0.58
HNRNPC-212ENST00000554539 PER1O15534 1290 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-212ENST00000554539 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-212ENST00000554539 MAP2K1Q02750 393 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-212ENST00000554539 MLLT1Q03111 559 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-212ENST00000554539 SCN7AQ01118 1682 aa11.45□□□□□ -0.58
HNRNPC-212ENST00000554539 KLRG2A4D1S0 409 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-212ENST00000554539 SNRPA1P09661 255 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-212ENST00000554539 GPTP24298 496 aa11.44□□□□□ -0.58
HNRNPC-212ENST00000554539 LMOD1P29536 600 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-212ENST00000554539 ALDH1B1P30837 517 aa11.44□□□□□ -0.58
HNRNPC-212ENST00000554539 CLEC4GQ6UXB4 293 aa11.44□□□□□ -0.58
HNRNPC-212ENST00000554539 DLK2Q6UY11 383 aa11.44□□□□□ -0.58
HNRNPC-212ENST00000554539 GPC2Q8N158 579 aa11.44□□□□□ -0.58
HNRNPC-212ENST00000554539 LARGE2Q8N3Y3 721 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms