RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 ABCC4O15439 1325 aa11.52□□□□□ -0.57
MARK3-207ENST00000553942 BTAF1O14981 1849 aa11.52□□□□□ -0.57
MARK3-207ENST00000553942 FAM177BA6PVY3 158 aa11.52□□□□□ -0.57
MARK3-207ENST00000553942 HLFQ16534 295 aa11.52□□□□□ -0.57
MARK3-207ENST00000553942 INTS5Q6P9B9 1019 aaKnown RBP11.52□□□□□ -0.57
MARK3-207ENST00000553942 RIC3Q7Z5B4 369 aa11.52□□□□□ -0.57
MARK3-207ENST00000553942 CCNL1Q9UK58 526 aaPredicted RBP11.52□□□□□ -0.57
MARK3-207ENST00000553942 PLEKHG2Q9H7P9 1386 aa11.52□□□□□ -0.57
MARK3-207ENST00000553942 ZBTB7BO15156 539 aaPredicted RBP11.51□□□□□ -0.57
MARK3-207ENST00000553942 APBA3O96018 575 aa11.51□□□□□ -0.57
MARK3-207ENST00000553942 HOXB7P09629 217 aa11.51□□□□□ -0.57
MARK3-207ENST00000553942 FAM196AQ6ZSG2 479 aa11.51□□□□□ -0.57
MARK3-207ENST00000553942 MYD88Q99836 296 aa11.51□□□□□ -0.57
MARK3-207ENST00000553942 NBPF7P0C2Y1 421 aaPredicted RBP11.51□□□□□ -0.57
MARK3-207ENST00000553942 GPTP24298 496 aa11.51□□□□□ -0.57
MARK3-207ENST00000553942 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
MARK3-207ENST00000553942 SYNE4Q8N205 404 aa11.51□□□□□ -0.57
MARK3-207ENST00000553942 DNAAF4Q8WXU2 420 aa11.51□□□□□ -0.57
MARK3-207ENST00000553942 SBF2Q86WG5 1849 aa11.5□□□□□ -0.57
MARK3-207ENST00000553942 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
MARK3-207ENST00000553942 DEFB132Q7Z7B7 95 aa11.5□□□□□ -0.57
MARK3-207ENST00000553942 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
MARK3-207ENST00000553942 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
MARK3-207ENST00000553942 STARD3NLO95772 234 aa11.49□□□□□ -0.57
MARK3-207ENST00000553942 IGKV5-2P06315 115 aa11.49□□□□□ -0.57
MARK3-207ENST00000553942 HYPKQ9NX55 129 aa11.49□□□□□ -0.57
MARK3-207ENST00000553942 MYH14Q7Z406 1995 aaKnown RBP11.49□□□□□ -0.57
MARK3-207ENST00000553942 PTPRCP08575 1304 aa11.49□□□□□ -0.57
MARK3-207ENST00000553942 EN1Q05925 392 aaPredicted RBP11.49□□□□□ -0.57
MARK3-207ENST00000553942 BEND3Q5T5X7 828 aa11.49□□□□□ -0.57
MARK3-207ENST00000553942 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
MARK3-207ENST00000553942 KSR2Q6VAB6 950 aa11.48□□□□□ -0.57
MARK3-207ENST00000553942 CCDC24Q8N4L8 307 aa11.48□□□□□ -0.57
MARK3-207ENST00000553942 ZBTB40Q9NUA8 1239 aa11.48□□□□□ -0.57
MARK3-207ENST00000553942 SRP68Q9UHB9 627 aaKnown RBP11.48□□□□□ -0.57
MARK3-207ENST00000553942 TJP1Q07157 1748 aa11.48□□□□□ -0.57
MARK3-207ENST00000553942 APBB1O00213 710 aa11.48□□□□□ -0.57
MARK3-207ENST00000553942 GNPATO15228 680 aa11.48□□□□□ -0.57
MARK3-207ENST00000553942 DDRGK1Q96HY6 314 aa11.48□□□□□ -0.57
MARK3-207ENST00000553942 USP44Q9H0E7 712 aa11.48□□□□□ -0.57
MARK3-207ENST00000553942 INTS3Q68E01 1043 aaKnown RBP11.47□□□□□ -0.57
MARK3-207ENST00000553942 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
MARK3-207ENST00000553942 SIRT2Q8IXJ6 389 aa11.47□□□□□ -0.57
MARK3-207ENST00000553942 CCDC87Q9NVE4 849 aa11.47□□□□□ -0.57
MARK3-207ENST00000553942 EZH2Q15910 746 aaKnown RBP11.47□□□□□ -0.57
MARK3-207ENST00000553942 CCDC85AQ96PX6 553 aaPredicted RBP11.47□□□□□ -0.57
MARK3-207ENST00000553942 NHSQ6T4R5 1651 aa11.46□□□□□ -0.57
MARK3-207ENST00000553942 TXNRD1Q16881 649 aa11.46□□□□□ -0.57
MARK3-207ENST00000553942 DZIP3Q86Y13 1208 aaKnown RBP11.46□□□□□ -0.57
MARK3-207ENST00000553942 SMARCC1Q92922 1105 aaPredicted RBP11.46□□□□□ -0.57
MARK3-207ENST00000553942 SRCIN1Q9C0H9 1055 aa11.46□□□□□ -0.57
MARK3-207ENST00000553942 DDX19BQ9UMR2 479 aa11.46□□□□□ -0.57
MARK3-207ENST00000553942 LRRFIP2Q9Y608 721 aaKnown RBP11.46□□□□□ -0.57
MARK3-207ENST00000553942 MS4A1P11836 297 aa11.45□□□□□ -0.58
MARK3-207ENST00000553942 PDGFDQ9GZP0 370 aaPredicted RBP11.45□□□□□ -0.58
MARK3-207ENST00000553942 LAMB4A4D0S4 1761 aa11.45□□□□□ -0.58
MARK3-207ENST00000553942 PNMA6EA0A0J9YXQ4 647 aa11.44□□□□□ -0.58
MARK3-207ENST00000553942 EIF5P55010 431 aaKnown RBP11.44□□□□□ -0.58
MARK3-207ENST00000553942 HSP90AA2PQ14568 343 aaPredicted RBP11.44□□□□□ -0.58
MARK3-207ENST00000553942 ZNF827Q17R98 1081 aa11.44□□□□□ -0.58
MARK3-207ENST00000553942 EPHA10Q5JZY3 1008 aa11.44□□□□□ -0.58
MARK3-207ENST00000553942 NEURL1BA8MQ27 555 aa11.44□□□□□ -0.58
MARK3-207ENST00000553942 UBE3BQ7Z3V4 1068 aa11.44□□□□□ -0.58
MARK3-207ENST00000553942 PLBD2Q8NHP8 589 aa11.44□□□□□ -0.58
MARK3-207ENST00000553942 KLHDC4Q8TBB5 520 aa11.44□□□□□ -0.58
MARK3-207ENST00000553942 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
MARK3-207ENST00000553942 METTL22Q9BUU2 404 aaPredicted RBP11.44□□□□□ -0.58
MARK3-207ENST00000553942 SOS1Q07889 1333 aaPredicted RBP11.44□□□□□ -0.58
MARK3-207ENST00000553942 DDX58O95786 925 aaKnown RBP11.43□□□□□ -0.58
MARK3-207ENST00000553942 TEX13AQ9BXU3 409 aaPredicted RBP11.43□□□□□ -0.58
MARK3-207ENST00000553942 C9orf78Q9NZ63 289 aaPredicted RBP11.43□□□□□ -0.58
MARK3-207ENST00000553942 CCT4P50991 539 aaKnown RBP11.43□□□□□ -0.58
MARK3-207ENST00000553942 NFKBIBQ15653 356 aa11.43□□□□□ -0.58
MARK3-207ENST00000553942 USPL1Q5W0Q7 1092 aa11.43□□□□□ -0.58
MARK3-207ENST00000553942 ARHGEF1Q92888 912 aaKnown RBP11.43□□□□□ -0.58
MARK3-207ENST00000553942 KAZALD1Q96I82 304 aa11.43□□□□□ -0.58
MARK3-207ENST00000553942 UBN2Q6ZU65 1347 aa11.42□□□□□ -0.58
MARK3-207ENST00000553942 A0A087WZG4 1122 aa11.42□□□□□ -0.58
MARK3-207ENST00000553942 IL6STP40189 918 aaPredicted RBP11.42□□□□□ -0.58
MARK3-207ENST00000553942 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
MARK3-207ENST00000553942 NUTM1Q86Y26 1132 aa11.42□□□□□ -0.58
MARK3-207ENST00000553942 SUCLG2Q96I99 432 aa11.42□□□□□ -0.58
MARK3-207ENST00000553942 COL15A1P39059 1388 aa11.42□□□□□ -0.58
MARK3-207ENST00000553942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.42□□□□□ -0.58
MARK3-207ENST00000553942 UBTFL1P0CB47 393 aaPredicted RBP11.42□□□□□ -0.58
MARK3-207ENST00000553942 GCKRQ14397 625 aa11.42□□□□□ -0.58
MARK3-207ENST00000553942 KIF6Q6ZMV9 814 aa11.42□□□□□ -0.58
MARK3-207ENST00000553942 MAP3K15Q6ZN16 1313 aa11.41□□□□□ -0.58
MARK3-207ENST00000553942 CAMTA2O94983 1202 aa11.41□□□□□ -0.58
MARK3-207ENST00000553942 RGS3P49796 1198 aa11.41□□□□□ -0.58
MARK3-207ENST00000553942 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
MARK3-207ENST00000553942 AK7Q96M32 723 aa11.41□□□□□ -0.58
MARK3-207ENST00000553942 BCL2L12Q9HB09 334 aa11.41□□□□□ -0.58
MARK3-207ENST00000553942 PA2G4Q9UQ80 394 aaKnown RBP11.41□□□□□ -0.58
MARK3-207ENST00000553942 NEXNQ0ZGT2 675 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 EXOC6BQ9Y2D4 811 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 ARFGEF2Q9Y6D5 1785 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 GRM8O00222 908 aa11.4□□□□□ -0.58
MARK3-207ENST00000553942 SMARCA5O60264 1052 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms