RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 TEFQ10587 303 aa8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 ST3GAL1Q11201 340 aa8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 ADCK5Q3MIX3 580 aa8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 NOL7Q9UMY1 257 aaKnown RBP8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 MAP3K2Q9Y2U5 619 aa8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 ADAMTS7Q9UKP4 1686 aa8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 SLIT3O75094 1523 aa8.37□□□□□ -1.07
LINC-ROR-201ENST00000553704 OFD1O75665 1012 aa8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 OS9Q13438 667 aaPredicted RBP8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 AKAP4Q5JQC9 854 aa8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 UBE2Q2Q8WVN8 375 aa8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 ADGRL3Q9HAR2 1447 aa8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 TRPM3Q9HCF6 1732 aaPredicted RBP8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 EPB41L2O43491 1005 aaKnown RBP8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 CASTP20810 708 aaKnown RBP8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 MTX1Q13505 466 aa8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 KAZALD1Q96I82 304 aa8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 TSPY26PQ9H489 355 aa8.36□□□□□ -1.07
LINC-ROR-201ENST00000553704 RNMTO43148 476 aaKnown RBP8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 SYT1P21579 422 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 HS1BP3Q53T59 392 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 ESCO1Q5FWF5 840 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 TLR7Q9NYK1 1049 aaKnown RBP8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 ZKSCAN5Q9Y2L8 839 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 TTC41PQ6P2S7 1318 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 ZNF142P52746 1687 aaPredicted RBP8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 HEG1Q9ULI3 1381 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 GIGYF1O75420 1035 aaPredicted RBP8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 GLRX3O76003 335 aaKnown RBP8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 ZSCAN22P10073 491 aaPredicted RBP8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 PRPF40BQ6NWY9 871 aaKnown RBP8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 CCDC83Q8IWF9 413 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 TMEM87AQ8NBN3 555 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 SUCLG2Q96I99 432 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 DIAPH3Q9NSV4 1193 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 HYPKQ9NX55 129 aa8.35□□□□□ -1.07
LINC-ROR-201ENST00000553704 FIBPO43427 364 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 ZNF500O60304 480 aaPredicted RBP8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 MPNDQ8N594 471 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 FAM227BQ96M60 508 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 JAKMIP1Q96N16 626 aaKnown RBP8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 DBF4Q9UBU7 674 aaPredicted RBP8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 LIMCH1Q9UPQ0 1083 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 TAF6LQ9Y6J9 622 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 OVOS2A0A0G2JMS6 1433 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 STX6O43752 255 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 SASH1O94885 1247 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 F13A1P00488 732 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 PSME1Q06323 249 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 AACSQ86V21 672 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 ORAI2Q96SN7 254 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 ECHDC1Q9NTX5 307 aa8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 C9orf78Q9NZ63 289 aaPredicted RBP8.34□□□□□ -1.07
LINC-ROR-201ENST00000553704 SCN11AQ9UI33 1791 aa8.34□□□□□ -1.08
LINC-ROR-201ENST00000553704 TPM2P07951 284 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 PLEKHO1Q53GL0 409 aaPredicted RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 KSR2Q6VAB6 950 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 CLASRPQ8N2M8 674 aaKnown RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 KLHDC4Q8TBB5 520 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 BICC1Q9H694 974 aaKnown RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 AXIN2Q9Y2T1 843 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 R3HCC1Q9Y3T6 440 aaKnown RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 CCDC171Q6TFL3 1326 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 GJB2P29033 226 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 AIMP1Q12904 312 aaKnown RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 NMIQ13287 307 aaPredicted RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 HSP90AB4PQ58FF6 505 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 ARHGEF25Q86VW2 580 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 NECAB1Q8N987 351 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 SYAP1Q96A49 352 aaPredicted RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 EAF2Q96CJ1 260 aaPredicted RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 SMC3Q9UQE7 1217 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 MTMR6Q9Y217 621 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 AFDNP55196 1824 aaKnown RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 NPHP4O75161 1426 aaPredicted RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 MRC1P22897 1456 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 A0A0D9SFI3 127 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 ALDH1L1O75891 902 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 GCP02774 474 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 IFIT2P09913 472 aaKnown RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 HSP90AA2PQ14568 343 aaPredicted RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 PDIA6Q15084 440 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 ME3Q16798 604 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 C1orf141Q5JVX7 400 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 KCNH5Q8NCM2 988 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 TCEANC2Q96MN5 208 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 CCDC8Q9H0W5 538 aaPredicted RBP8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 SIL1Q9H173 461 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 PDRG1Q9NUG6 133 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 USP25Q9UHP3 1055 aa8.33□□□□□ -1.08
LINC-ROR-201ENST00000553704 KDM6AO15550 1401 aaPredicted RBP8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 GRM8O00222 908 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 HCLS1P14317 486 aaPredicted RBP8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 DNM1Q05193 864 aaKnown RBP8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 NECTIN1Q15223 517 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 CCDC183Q5T5S1 534 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 KCNB2Q92953 911 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms