RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 ERFEQ4G0M1 354 aa12.5□□□□□ -0.41
CHD8-203ENST00000553283 NBPF5PQ86XG9 351 aaPredicted RBP12.5□□□□□ -0.41
CHD8-203ENST00000553283 MASTLQ96GX5 879 aa12.5□□□□□ -0.41
CHD8-203ENST00000553283 LTBP3Q9NS15 1303 aa12.5□□□□□ -0.41
CHD8-203ENST00000553283 SIPA1L3O60292 1781 aaPredicted RBP12.5□□□□□ -0.41
CHD8-203ENST00000553283 DLEC1Q9Y238 1755 aa12.49□□□□□ -0.41
CHD8-203ENST00000553283 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
CHD8-203ENST00000553283 RGL2O15211 777 aa12.49□□□□□ -0.41
CHD8-203ENST00000553283 TAF7Q15545 349 aaPredicted RBP12.49□□□□□ -0.41
CHD8-203ENST00000553283 SOGA3Q5TF21 947 aa12.49□□□□□ -0.41
CHD8-203ENST00000553283 PRPF40BQ6NWY9 871 aaKnown RBP12.49□□□□□ -0.41
CHD8-203ENST00000553283 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
CHD8-203ENST00000553283 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
CHD8-203ENST00000553283 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
CHD8-203ENST00000553283 ZNF652Q9Y2D9 606 aa12.49□□□□□ -0.41
CHD8-203ENST00000553283 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
CHD8-203ENST00000553283 TPTE2Q6XPS3 522 aa12.48□□□□□ -0.41
CHD8-203ENST00000553283 C7orf43Q8WVR3 580 aa12.48□□□□□ -0.41
CHD8-203ENST00000553283 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
CHD8-203ENST00000553283 ANKRD31Q8N7Z5 1873 aa12.47□□□□□ -0.41
CHD8-203ENST00000553283 KLRG2A4D1S0 409 aaPredicted RBP12.47□□□□□ -0.41
CHD8-203ENST00000553283 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
CHD8-203ENST00000553283 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHD8-203ENST00000553283 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
CHD8-203ENST00000553283 NPR1P16066 1061 aa12.46□□□□□ -0.41
CHD8-203ENST00000553283 DDNO94850 711 aaPredicted RBP12.45□□□□□ -0.42
CHD8-203ENST00000553283 NEFMP07197 916 aa12.45□□□□□ -0.42
CHD8-203ENST00000553283 HLFQ16534 295 aa12.45□□□□□ -0.42
CHD8-203ENST00000553283 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
CHD8-203ENST00000553283 CCDC93Q567U6 631 aa12.44□□□□□ -0.42
CHD8-203ENST00000553283 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
CHD8-203ENST00000553283 COL11A2P13942 1736 aaPredicted RBP12.43□□□□□ -0.42
CHD8-203ENST00000553283 FER1L6Q2WGJ9 1857 aa12.43□□□□□ -0.42
CHD8-203ENST00000553283 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
CHD8-203ENST00000553283 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
CHD8-203ENST00000553283 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
CHD8-203ENST00000553283 CCDC88AQ3V6T2 1871 aa12.42□□□□□ -0.42
CHD8-203ENST00000553283 ERVV-1B6SEH8 477 aa12.42□□□□□ -0.42
CHD8-203ENST00000553283 GTF2E1P29083 439 aaPredicted RBP12.42□□□□□ -0.42
CHD8-203ENST00000553283 ALDH1B1P30837 517 aa12.42□□□□□ -0.42
CHD8-203ENST00000553283 EIF4A1P60842 406 aaKnown RBP12.42□□□□□ -0.42
CHD8-203ENST00000553283 FKBP4Q02790 459 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHD8-203ENST00000553283 NFE2L2Q16236 605 aa12.42□□□□□ -0.42
CHD8-203ENST00000553283 COL13A1Q5TAT6 717 aaPredicted RBP12.42□□□□□ -0.42
CHD8-203ENST00000553283 RTKN2Q8IZC4 609 aa12.42□□□□□ -0.42
CHD8-203ENST00000553283 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
CHD8-203ENST00000553283 L3MBTL3Q96JM7 780 aaPredicted RBP12.42□□□□□ -0.42
CHD8-203ENST00000553283 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
CHD8-203ENST00000553283 IQCA1LA6NCM1 817 aa12.41□□□□□ -0.42
CHD8-203ENST00000553283 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
CHD8-203ENST00000553283 POTEJP0CG39 1038 aa12.41□□□□□ -0.42
CHD8-203ENST00000553283 OLFM4Q6UX06 510 aa12.41□□□□□ -0.42
CHD8-203ENST00000553283 TIAM2Q8IVF5 1701 aa12.41□□□□□ -0.42
CHD8-203ENST00000553283 NYXQ9GZU5 481 aa12.41□□□□□ -0.42
CHD8-203ENST00000553283 PNNQ9H307 717 aaKnown RBP12.41□□□□□ -0.42
CHD8-203ENST00000553283 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
CHD8-203ENST00000553283 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
CHD8-203ENST00000553283 CRY2Q49AN0 593 aa12.4□□□□□ -0.42
CHD8-203ENST00000553283 THUMPD2Q9BTF0 503 aaKnown RBP12.4□□□□□ -0.42
CHD8-203ENST00000553283 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
CHD8-203ENST00000553283 MAP3K15Q6ZN16 1313 aa12.39□□□□□ -0.43
CHD8-203ENST00000553283 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
CHD8-203ENST00000553283 KIF6Q6ZMV9 814 aa12.39□□□□□ -0.43
CHD8-203ENST00000553283 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
CHD8-203ENST00000553283 LDHDQ86WU2 507 aa12.39□□□□□ -0.43
CHD8-203ENST00000553283 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
CHD8-203ENST00000553283 SYNE4Q8N205 404 aa12.39□□□□□ -0.43
CHD8-203ENST00000553283 TAF1DQ9H5J8 278 aaPredicted RBP12.39□□□□□ -0.43
CHD8-203ENST00000553283 FZD9O00144 591 aa12.38□□□□□ -0.43
CHD8-203ENST00000553283 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
CHD8-203ENST00000553283 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
CHD8-203ENST00000553283 MYL6BP14649 208 aa12.38□□□□□ -0.43
CHD8-203ENST00000553283 HOXA10P31260 410 aaPredicted RBP12.38□□□□□ -0.43
CHD8-203ENST00000553283 IARSP41252 1262 aaKnown RBP12.38□□□□□ -0.43
CHD8-203ENST00000553283 CC2D2BQ6DHV5 1058 aa12.38□□□□□ -0.43
CHD8-203ENST00000553283 PSMD1Q99460 953 aa12.38□□□□□ -0.43
CHD8-203ENST00000553283 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
CHD8-203ENST00000553283 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
CHD8-203ENST00000553283 GPTP24298 496 aa12.37□□□□□ -0.43
CHD8-203ENST00000553283 SUSD4Q5VX71 490 aa12.37□□□□□ -0.43
CHD8-203ENST00000553283 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
CHD8-203ENST00000553283 ZBTB3Q9H5J0 574 aa12.37□□□□□ -0.43
CHD8-203ENST00000553283 HACL1Q9UJ83 578 aa12.37□□□□□ -0.43
CHD8-203ENST00000553283 ERBB4Q15303 1308 aa12.37□□□□□ -0.43
CHD8-203ENST00000553283 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
CHD8-203ENST00000553283 ARFGEF2Q9Y6D5 1785 aa12.36□□□□□ -0.43
CHD8-203ENST00000553283 ABCC12Q96J65 1359 aa12.36□□□□□ -0.43
CHD8-203ENST00000553283 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
CHD8-203ENST00000553283 GRIPAP1Q4V328 841 aa12.36□□□□□ -0.43
CHD8-203ENST00000553283 GIGYF2Q6Y7W6 1299 aaKnown RBP12.36□□□□□ -0.43
CHD8-203ENST00000553283 TNS4Q8IZW8 715 aa12.36□□□□□ -0.43
CHD8-203ENST00000553283 JDP2Q8WYK2 163 aa12.36□□□□□ -0.43
CHD8-203ENST00000553283 RPGRQ92834 1020 aaKnown RBP12.36□□□□□ -0.43
CHD8-203ENST00000553283 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
CHD8-203ENST00000553283 UBN2Q6ZU65 1347 aa12.36□□□□□ -0.43
CHD8-203ENST00000553283 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
CHD8-203ENST00000553283 EPHX2P34913 555 aa12.35□□□□□ -0.43
CHD8-203ENST00000553283 RIPK4P57078 832 aa12.35□□□□□ -0.43
CHD8-203ENST00000553283 EAPPQ56P03 285 aaPredicted RBP12.35□□□□□ -0.43
CHD8-203ENST00000553283 PNMA8AQ86V59 439 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms