RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 ALDH1L1O75891 902 aa17.5■□□□□ 0.39
ACTR6-213ENST00000553038 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
ACTR6-213ENST00000553038 N4BP2Q86UW6 1770 aaPredicted RBP17.5■□□□□ 0.39
ACTR6-213ENST00000553038 ATRNO75882 1429 aa17.5■□□□□ 0.39
ACTR6-213ENST00000553038 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
ACTR6-213ENST00000553038 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
ACTR6-213ENST00000553038 APBB1O00213 710 aa17.48■□□□□ 0.39
ACTR6-213ENST00000553038 NBPF7P0C2Y1 421 aaPredicted RBP17.48■□□□□ 0.39
ACTR6-213ENST00000553038 ATP6V1AP38606 617 aa17.48■□□□□ 0.39
ACTR6-213ENST00000553038 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
ACTR6-213ENST00000553038 SEPT12Q8IYM1 358 aa17.48■□□□□ 0.39
ACTR6-213ENST00000553038 PLBD2Q8NHP8 589 aa17.48■□□□□ 0.39
ACTR6-213ENST00000553038 ZBTB3Q9H5J0 574 aa17.48■□□□□ 0.39
ACTR6-213ENST00000553038 KIF6Q6ZMV9 814 aa17.48■□□□□ 0.39
ACTR6-213ENST00000553038 TTLL7Q6ZT98 887 aa17.48■□□□□ 0.39
ACTR6-213ENST00000553038 SMARCC1Q92922 1105 aaPredicted RBP17.48■□□□□ 0.39
ACTR6-213ENST00000553038 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
ACTR6-213ENST00000553038 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
ACTR6-213ENST00000553038 IPO9Q96P70 1041 aaKnown RBP17.47■□□□□ 0.39
ACTR6-213ENST00000553038 DEKP35659 375 aaKnown RBP17.47■□□□□ 0.39
ACTR6-213ENST00000553038 C16orf71Q8IYS4 520 aaPredicted RBP17.47■□□□□ 0.39
ACTR6-213ENST00000553038 SLC4A9Q96Q91 983 aa17.47■□□□□ 0.39
ACTR6-213ENST00000553038 THSD7AQ9UPZ6 1657 aa17.46■□□□□ 0.39
ACTR6-213ENST00000553038 LOC102724428A0A0B4J2F2 783 aa17.46■□□□□ 0.39
ACTR6-213ENST00000553038 PNMA6EA0A0J9YXQ4 647 aa17.46■□□□□ 0.39
ACTR6-213ENST00000553038 NEURL1BA8MQ27 555 aa17.46■□□□□ 0.39
ACTR6-213ENST00000553038 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
ACTR6-213ENST00000553038 CYP19A1P11511 503 aaPredicted RBP17.46■□□□□ 0.39
ACTR6-213ENST00000553038 SIK1P57059 783 aa17.46■□□□□ 0.39
ACTR6-213ENST00000553038 GRM8O00222 908 aa17.45■□□□□ 0.38
ACTR6-213ENST00000553038 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
ACTR6-213ENST00000553038 ATP8B2P98198 1209 aa17.45■□□□□ 0.38
ACTR6-213ENST00000553038 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
ACTR6-213ENST00000553038 ZBTB1Q9Y2K1 713 aa17.43■□□□□ 0.38
ACTR6-213ENST00000553038 GCKRQ14397 625 aa17.43■□□□□ 0.38
ACTR6-213ENST00000553038 OTUD7AQ8TE49 926 aaPredicted RBP17.43■□□□□ 0.38
ACTR6-213ENST00000553038 ARFGEF2Q9Y6D5 1785 aa17.43■□□□□ 0.38
ACTR6-213ENST00000553038 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
ACTR6-213ENST00000553038 ZNF772Q68DY9 489 aaPredicted RBP17.42■□□□□ 0.38
ACTR6-213ENST00000553038 PPP1R42Q7Z4L9 355 aa17.42■□□□□ 0.38
ACTR6-213ENST00000553038 PLEKHM2Q8IWE5 1019 aa17.42■□□□□ 0.38
ACTR6-213ENST00000553038 EXOC6BQ9Y2D4 811 aa17.42■□□□□ 0.38
ACTR6-213ENST00000553038 A0A087WZG4 1122 aa17.41■□□□□ 0.38
ACTR6-213ENST00000553038 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
ACTR6-213ENST00000553038 CCDC87Q9NVE4 849 aa17.41■□□□□ 0.38
ACTR6-213ENST00000553038 TJP1Q07157 1748 aa17.41■□□□□ 0.38
ACTR6-213ENST00000553038 ONECUT3O60422 494 aaPredicted RBP17.4■□□□□ 0.38
ACTR6-213ENST00000553038 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
ACTR6-213ENST00000553038 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
ACTR6-213ENST00000553038 SUCLG2Q96I99 432 aa17.4■□□□□ 0.38
ACTR6-213ENST00000553038 CWC25Q9NXE8 425 aaPredicted RBP17.4■□□□□ 0.38
ACTR6-213ENST00000553038 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
ACTR6-213ENST00000553038 ITPK1Q13572 414 aa17.4■□□□□ 0.38
ACTR6-213ENST00000553038 UBE3BQ7Z3V4 1068 aa17.4■□□□□ 0.38
ACTR6-213ENST00000553038 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
ACTR6-213ENST00000553038 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
ACTR6-213ENST00000553038 OS9Q13438 667 aaPredicted RBP17.38■□□□□ 0.37
ACTR6-213ENST00000553038 DZIP3Q86Y13 1208 aaKnown RBP17.38■□□□□ 0.37
ACTR6-213ENST00000553038 MAP3K15Q6ZN16 1313 aa17.38■□□□□ 0.37
ACTR6-213ENST00000553038 SURF6O75683 361 aaKnown RBP17.38■□□□□ 0.37
ACTR6-213ENST00000553038 KCNQ4P56696 695 aa17.38■□□□□ 0.37
ACTR6-213ENST00000553038 BMP2KLQ5H9B9 411 aa17.38■□□□□ 0.37
ACTR6-213ENST00000553038 KRT27Q7Z3Y8 459 aa17.38■□□□□ 0.37
ACTR6-213ENST00000553038 SSH3Q8TE77 659 aa17.38■□□□□ 0.37
ACTR6-213ENST00000553038 BICC1Q9H694 974 aaKnown RBP17.38■□□□□ 0.37
ACTR6-213ENST00000553038 TBC1D2BQ9UPU7 963 aa17.38■□□□□ 0.37
ACTR6-213ENST00000553038 UTYO14607 1347 aa17.37■□□□□ 0.37
ACTR6-213ENST00000553038 GSPT1P15170 499 aaKnown RBP17.37■□□□□ 0.37
ACTR6-213ENST00000553038 RBM6P78332 1123 aaKnown RBP17.37■□□□□ 0.37
ACTR6-213ENST00000553038 TCIRG1Q13488 830 aa17.37■□□□□ 0.37
ACTR6-213ENST00000553038 POLA2Q14181 598 aa17.37■□□□□ 0.37
ACTR6-213ENST00000553038 INTS5Q6P9B9 1019 aaKnown RBP17.37■□□□□ 0.37
ACTR6-213ENST00000553038 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
ACTR6-213ENST00000553038 NUP188Q5SRE5 1749 aa17.36■□□□□ 0.37
ACTR6-213ENST00000553038 CCDC191Q8NCU4 936 aa17.36■□□□□ 0.37
ACTR6-213ENST00000553038 LRRCC1Q9C099 1032 aa17.36■□□□□ 0.37
ACTR6-213ENST00000553038 CHMP3Q9Y3E7 222 aa17.36■□□□□ 0.37
ACTR6-213ENST00000553038 GPTP24298 496 aa17.35■□□□□ 0.37
ACTR6-213ENST00000553038 HSP90AB3PQ58FF7 597 aa17.35■□□□□ 0.37
ACTR6-213ENST00000553038 UBE2Q2Q8WVN8 375 aa17.35■□□□□ 0.37
ACTR6-213ENST00000553038 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
ACTR6-213ENST00000553038 CCNL1Q9UK58 526 aaPredicted RBP17.35■□□□□ 0.37
ACTR6-213ENST00000553038 BTAF1O14981 1849 aa17.35■□□□□ 0.37
ACTR6-213ENST00000553038 IBTKQ9P2D0 1353 aaPredicted RBP17.35■□□□□ 0.37
ACTR6-213ENST00000553038 HLFQ16534 295 aa17.34■□□□□ 0.37
ACTR6-213ENST00000553038 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
ACTR6-213ENST00000553038 FAM196AQ6ZSG2 479 aa17.34■□□□□ 0.37
ACTR6-213ENST00000553038 LINC00116Q8NCU8 138 aa17.34■□□□□ 0.37
ACTR6-213ENST00000553038 KAZALD1Q96I82 304 aa17.34■□□□□ 0.37
ACTR6-213ENST00000553038 MFAP1P55081 439 aaKnown RBP17.33■□□□□ 0.37
ACTR6-213ENST00000553038 HSP90AB4PQ58FF6 505 aa17.33■□□□□ 0.37
ACTR6-213ENST00000553038 TTC22Q5TAA0 569 aa17.33■□□□□ 0.37
ACTR6-213ENST00000553038 RAB11FIP3O75154 756 aa17.33■□□□□ 0.36
ACTR6-213ENST00000553038 EIF5P55010 431 aaKnown RBP17.33■□□□□ 0.36
ACTR6-213ENST00000553038 BCL11BQ9C0K0 894 aaPredicted RBP17.33■□□□□ 0.36
ACTR6-213ENST00000553038 SLC4A3P48751 1232 aa17.32■□□□□ 0.36
ACTR6-213ENST00000553038 MTX1Q13505 466 aa17.32■□□□□ 0.36
ACTR6-213ENST00000553038 ISCA1Q9BUE6 129 aa17.32■□□□□ 0.36
ACTR6-213ENST00000553038 H7C1W4 665 aa17.31■□□□□ 0.36
ACTR6-213ENST00000553038 RXRBP28702 533 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms