RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-223ENST00000551260 MCOLN1Q9GZU1 580 aa8.63□□□□□ -1.03
RACGAP1-223ENST00000551260 USP31Q70CQ4 1352 aa8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 POTEB3A0JP26 581 aa8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 LMNB1P20700 586 aa8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 POTEBQ6S5H4 581 aa8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 USHBP1Q8N6Y0 703 aa8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 PTCD2Q8WV60 388 aaKnown RBP8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 DDX27Q96GQ7 796 aaKnown RBP8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 PCDHGA4Q9Y5G9 962 aa8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 ADAMTSL1Q8N6G6 1762 aa8.62□□□□□ -1.03
RACGAP1-223ENST00000551260 WDR33Q9C0J8 1336 aaKnown RBP8.61□□□□□ -1.03
RACGAP1-223ENST00000551260 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
RACGAP1-223ENST00000551260 TMEM88BA6NKF7 163 aa8.61□□□□□ -1.03
RACGAP1-223ENST00000551260 GYS1P13807 737 aa8.61□□□□□ -1.03
RACGAP1-223ENST00000551260 SIK1P57059 783 aa8.61□□□□□ -1.03
RACGAP1-223ENST00000551260 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
RACGAP1-223ENST00000551260 NLGN1Q8N2Q7 840 aa8.61□□□□□ -1.03
RACGAP1-223ENST00000551260 IP6K1Q92551 441 aa8.61□□□□□ -1.03
RACGAP1-223ENST00000551260 ANKRD31Q8N7Z5 1873 aa8.61□□□□□ -1.03
RACGAP1-223ENST00000551260 SOX10P56693 466 aa8.6□□□□□ -1.03
RACGAP1-223ENST00000551260 PIGBQ92521 554 aa8.6□□□□□ -1.03
RACGAP1-223ENST00000551260 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
RACGAP1-223ENST00000551260 FBLN1P23142 703 aa8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 HMGB2P26583 209 aaKnown RBP8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 MAP2K1Q02750 393 aaPredicted RBP8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 DDR1Q08345 913 aa8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 DEFB115Q30KQ5 88 aa8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 TRAPPC3LQ5T215 181 aa8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 OXER1Q8TDS5 423 aa8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 ARHGEF1Q92888 912 aaKnown RBP8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 TSHZ2Q9NRE2 1034 aa8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 NRXN2Q9P2S2 1712 aa8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 ZNF831Q5JPB2 1677 aa8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 ADAMTS7Q9UKP4 1686 aa8.59□□□□□ -1.03
RACGAP1-223ENST00000551260 COL11A2P13942 1736 aaPredicted RBP8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 FAM205CA6NFA0 338 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 RASSF10A6NK89 507 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 NFKBIEO00221 500 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 CYP27B1O15528 508 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 DDNO94850 711 aaPredicted RBP8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 ITGBL1O95965 494 aaPredicted RBP8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 NUDT7P0C024 238 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 ATP6V1AP38606 617 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 DGKZQ13574 1117 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 NBPF6Q5VWK0 638 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 NBPF4Q96M43 638 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 ASAP1Q9ULH1 1129 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 SBNO2Q9Y2G9 1366 aa8.58□□□□□ -1.04
RACGAP1-223ENST00000551260 CD163L1Q9NR16 1453 aa8.57□□□□□ -1.04
RACGAP1-223ENST00000551260 SLX4Q8IY92 1834 aa8.57□□□□□ -1.04
RACGAP1-223ENST00000551260 HOXC9P31274 260 aa8.57□□□□□ -1.04
RACGAP1-223ENST00000551260 PLCB2Q00722 1185 aa8.57□□□□□ -1.04
RACGAP1-223ENST00000551260 GRM1Q13255 1194 aa8.57□□□□□ -1.04
RACGAP1-223ENST00000551260 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
RACGAP1-223ENST00000551260 SRP68Q9UHB9 627 aaKnown RBP8.57□□□□□ -1.04
RACGAP1-223ENST00000551260 RTCBQ9Y3I0 505 aaKnown RBP8.57□□□□□ -1.04
RACGAP1-223ENST00000551260 EVC2Q86UK5 1308 aa8.56□□□□□ -1.04
RACGAP1-223ENST00000551260 PCDH11XQ9BZA7 1347 aa8.56□□□□□ -1.04
RACGAP1-223ENST00000551260 PCDH11YQ9BZA8 1340 aa8.56□□□□□ -1.04
RACGAP1-223ENST00000551260 RFC4P35249 363 aa8.56□□□□□ -1.04
RACGAP1-223ENST00000551260 AKAP11Q9UKA4 1901 aa8.56□□□□□ -1.04
RACGAP1-223ENST00000551260 ARFGEF2Q9Y6D5 1785 aa8.56□□□□□ -1.04
RACGAP1-223ENST00000551260 TJP1Q07157 1748 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 CAMK2BQ13554 666 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 CYP4F22Q6NT55 531 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 LDHDQ86WU2 507 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 CDAN1Q8IWY9 1227 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 RAPGEF4Q8WZA2 1011 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 SLC4A9Q96Q91 983 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 EMILIN3Q9NT22 766 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 ABT1Q9ULW3 272 aaKnown RBP8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 SCN11AQ9UI33 1791 aa8.55□□□□□ -1.04
RACGAP1-223ENST00000551260 MAP3K19Q56UN5 1328 aa8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 AOC2O75106 756 aa8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 TATP17735 454 aaPredicted RBP8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 FMR1Q06787 632 aaKnown RBP eCLIP8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 ERFEQ4G0M1 354 aa8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 EAPPQ56P03 285 aaPredicted RBP8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 VARS2Q5ST30 1063 aaKnown RBP8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 MAP1SQ66K74 1059 aaPredicted RBP8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 CAPNS2Q96L46 248 aa8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 STAC3Q96MF2 364 aa8.54□□□□□ -1.04
RACGAP1-223ENST00000551260 KDRP35968 1356 aa8.53□□□□□ -1.04
RACGAP1-223ENST00000551260 ZNF316A6NFI3 1004 aaPredicted RBP8.53□□□□□ -1.04
RACGAP1-223ENST00000551260 POLRMTO00411 1230 aaKnown RBP8.53□□□□□ -1.04
RACGAP1-223ENST00000551260 TAF1DQ9H5J8 278 aaPredicted RBP8.53□□□□□ -1.04
RACGAP1-223ENST00000551260 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
RACGAP1-223ENST00000551260 LHX6Q9UPM6 363 aa8.53□□□□□ -1.04
RACGAP1-223ENST00000551260 CGNL1Q0VF96 1302 aa8.53□□□□□ -1.04
RACGAP1-223ENST00000551260 TBC1D12O60347 775 aa8.52□□□□□ -1.05
RACGAP1-223ENST00000551260 RPS6KA4O75676 772 aa8.52□□□□□ -1.05
RACGAP1-223ENST00000551260 AMPHP49418 695 aa8.52□□□□□ -1.05
RACGAP1-223ENST00000551260 HABP4Q5JVS0 413 aaKnown RBP8.52□□□□□ -1.05
RACGAP1-223ENST00000551260 GPR101Q96P66 508 aaPredicted RBP8.52□□□□□ -1.05
RACGAP1-223ENST00000551260 CNTROBQ8N137 903 aa8.51□□□□□ -1.05
RACGAP1-223ENST00000551260 TTLL6Q8N841 843 aa8.51□□□□□ -1.05
RACGAP1-223ENST00000551260 TMOD3Q9NYL9 352 aa8.51□□□□□ -1.05
RACGAP1-223ENST00000551260 CARMIL3Q8ND23 1372 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms