RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 RIMS1Q86UR5 1692 aaKnown RBP9.35□□□□□ -0.91
COX6A1-202ENST00000549525 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
COX6A1-202ENST00000549525 IDI1Q13907 227 aa9.34□□□□□ -0.91
COX6A1-202ENST00000549525 SLFNL1Q499Z3 407 aa9.34□□□□□ -0.91
COX6A1-202ENST00000549525 CCDC125Q86Z20 511 aa9.34□□□□□ -0.91
COX6A1-202ENST00000549525 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
COX6A1-202ENST00000549525 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.34□□□□□ -0.91
COX6A1-202ENST00000549525 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
COX6A1-202ENST00000549525 SPATA31D1Q6ZQQ2 1576 aa9.33□□□□□ -0.92
COX6A1-202ENST00000549525 E9PCH4 1651 aa9.33□□□□□ -0.92
COX6A1-202ENST00000549525 UHRF1BP1Q6BDS2 1440 aa9.33□□□□□ -0.92
COX6A1-202ENST00000549525 SNRPBP14678 240 aaKnown RBP9.33□□□□□ -0.92
COX6A1-202ENST00000549525 ZNF326Q5BKZ1 582 aaKnown RBP9.33□□□□□ -0.92
COX6A1-202ENST00000549525 C6orf118Q5T5N4 469 aa9.33□□□□□ -0.92
COX6A1-202ENST00000549525 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
COX6A1-202ENST00000549525 ZNF787Q6DD87 383 aa9.33□□□□□ -0.92
COX6A1-202ENST00000549525 EID1Q9Y6B2 187 aa9.33□□□□□ -0.92
COX6A1-202ENST00000549525 C3P01024 1663 aa9.32□□□□□ -0.92
COX6A1-202ENST00000549525 TRPM2O94759 1503 aa9.32□□□□□ -0.92
COX6A1-202ENST00000549525 TRAK2O60296 914 aa9.32□□□□□ -0.92
COX6A1-202ENST00000549525 ADH1AP07327 375 aa9.32□□□□□ -0.92
COX6A1-202ENST00000549525 UCN2Q96RP3 112 aa9.32□□□□□ -0.92
COX6A1-202ENST00000549525 PREX1Q8TCU6 1659 aa9.32□□□□□ -0.92
COX6A1-202ENST00000549525 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
COX6A1-202ENST00000549525 CC2D2BQ6DHV5 1058 aa9.31□□□□□ -0.92
COX6A1-202ENST00000549525 GLMNQ92990 594 aa9.31□□□□□ -0.92
COX6A1-202ENST00000549525 TSEN34Q9BSV6 310 aaKnown RBP9.31□□□□□ -0.92
COX6A1-202ENST00000549525 SENP2Q9HC62 589 aa9.31□□□□□ -0.92
COX6A1-202ENST00000549525 DOLKQ9UPQ8 538 aa9.31□□□□□ -0.92
COX6A1-202ENST00000549525 SPHKAPQ2M3C7 1700 aa9.31□□□□□ -0.92
COX6A1-202ENST00000549525 A2ML1A8K2U0 1454 aa9.3□□□□□ -0.92
COX6A1-202ENST00000549525 TONSLQ96HA7 1378 aa9.3□□□□□ -0.92
COX6A1-202ENST00000549525 C11orf95C9JLR9 678 aaPredicted RBP9.3□□□□□ -0.92
COX6A1-202ENST00000549525 BMP2P12643 396 aa9.3□□□□□ -0.92
COX6A1-202ENST00000549525 RELBQ01201 579 aa9.3□□□□□ -0.92
COX6A1-202ENST00000549525 SCARF1Q14162 830 aa9.3□□□□□ -0.92
COX6A1-202ENST00000549525 ANKLE2Q86XL3 938 aa9.3□□□□□ -0.92
COX6A1-202ENST00000549525 PLPP7Q8NBV4 271 aa9.3□□□□□ -0.92
COX6A1-202ENST00000549525 OSBPL3Q9H4L5 887 aa9.3□□□□□ -0.92
COX6A1-202ENST00000549525 CFAP65Q6ZU64 1925 aaKnown RBP9.3□□□□□ -0.92
COX6A1-202ENST00000549525 PLA2R1Q13018 1463 aa9.29□□□□□ -0.92
COX6A1-202ENST00000549525 PPP1R15AO75807 674 aaPredicted RBP9.29□□□□□ -0.92
COX6A1-202ENST00000549525 RGL3Q3MIN7 710 aa9.29□□□□□ -0.92
COX6A1-202ENST00000549525 ZMYND15Q9H091 742 aa9.29□□□□□ -0.92
COX6A1-202ENST00000549525 ZNF395Q9H8N7 513 aaPredicted RBP9.29□□□□□ -0.92
COX6A1-202ENST00000549525 NEURL4Q96JN8 1562 aa9.29□□□□□ -0.92
COX6A1-202ENST00000549525 UGGT1Q9NYU2 1555 aa9.29□□□□□ -0.92
COX6A1-202ENST00000549525 SPINT1O43278 529 aa9.28□□□□□ -0.92
COX6A1-202ENST00000549525 UPP2O95045 317 aa9.28□□□□□ -0.92
COX6A1-202ENST00000549525 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
COX6A1-202ENST00000549525 KDM5AP29375 1690 aaKnown RBP9.28□□□□□ -0.92
COX6A1-202ENST00000549525 PTGIRP43119 386 aa9.27□□□□□ -0.93
COX6A1-202ENST00000549525 OXLD1Q5BKU9 147 aa9.27□□□□□ -0.93
COX6A1-202ENST00000549525 TBC1D9Q6ZT07 1266 aa9.27□□□□□ -0.93
COX6A1-202ENST00000549525 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
COX6A1-202ENST00000549525 DCAF11Q8TEB1 546 aa9.27□□□□□ -0.93
COX6A1-202ENST00000549525 SIN3AQ96ST3 1273 aa9.27□□□□□ -0.93
COX6A1-202ENST00000549525 SOS2Q07890 1332 aaPredicted RBP9.27□□□□□ -0.93
COX6A1-202ENST00000549525 KIF1BO60333 1816 aa9.26□□□□□ -0.93
COX6A1-202ENST00000549525 SYNMO15061 1565 aa9.26□□□□□ -0.93
COX6A1-202ENST00000549525 SOBPA7XYQ1 873 aa9.26□□□□□ -0.93
COX6A1-202ENST00000549525 ATP5J2-PTCD1G3V325 749 aa9.26□□□□□ -0.93
COX6A1-202ENST00000549525 SKIP12755 728 aa9.26□□□□□ -0.93
COX6A1-202ENST00000549525 MAP7D1Q3KQU3 841 aa9.26□□□□□ -0.93
COX6A1-202ENST00000549525 TXNDC2Q86VQ3 553 aa9.26□□□□□ -0.93
COX6A1-202ENST00000549525 INSM2Q96T92 566 aaPredicted RBP9.26□□□□□ -0.93
COX6A1-202ENST00000549525 PIK3C2BO00750 1634 aa9.26□□□□□ -0.93
COX6A1-202ENST00000549525 TMEM2Q9UHN6 1383 aa9.25□□□□□ -0.93
COX6A1-202ENST00000549525 CEP170BQ9Y4F5 1589 aaPredicted RBP9.25□□□□□ -0.93
COX6A1-202ENST00000549525 CTSOP43234 321 aaPredicted RBP9.25□□□□□ -0.93
COX6A1-202ENST00000549525 ADGRB3O60242 1522 aa9.25□□□□□ -0.93
COX6A1-202ENST00000549525 SPATA31E1Q6ZUB1 1445 aa9.24□□□□□ -0.93
COX6A1-202ENST00000549525 MYCP01106 439 aaPredicted RBP9.24□□□□□ -0.93
COX6A1-202ENST00000549525 CYP2U1Q7Z449 544 aa9.24□□□□□ -0.93
COX6A1-202ENST00000549525 L3MBTL2Q969R5 705 aa9.24□□□□□ -0.93
COX6A1-202ENST00000549525 CALR3Q96L12 384 aaKnown RBP9.24□□□□□ -0.93
COX6A1-202ENST00000549525 DNMT3LQ9UJW3 386 aa9.24□□□□□ -0.93
COX6A1-202ENST00000549525 CLTCL1P53675 1640 aa9.23□□□□□ -0.93
COX6A1-202ENST00000549525 MYO3AQ8NEV4 1616 aa9.23□□□□□ -0.93
COX6A1-202ENST00000549525 ZFYVE9O95405 1425 aa9.23□□□□□ -0.93
COX6A1-202ENST00000549525 A0A1W2PRU2 124 aa9.23□□□□□ -0.93
COX6A1-202ENST00000549525 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
COX6A1-202ENST00000549525 STAU1O95793 577 aaKnown RBP9.23□□□□□ -0.93
COX6A1-202ENST00000549525 USP4Q13107 963 aa9.23□□□□□ -0.93
COX6A1-202ENST00000549525 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
COX6A1-202ENST00000549525 TMEM131LA2VDJ0 1609 aa9.23□□□□□ -0.93
COX6A1-202ENST00000549525 ZNF142P52746 1687 aaPredicted RBP9.23□□□□□ -0.93
COX6A1-202ENST00000549525 RIMS2Q9UQ26 1411 aa9.22□□□□□ -0.93
COX6A1-202ENST00000549525 SLIT1O75093 1534 aa9.22□□□□□ -0.93
COX6A1-202ENST00000549525 TTLL8A6PVC2 850 aa9.22□□□□□ -0.93
COX6A1-202ENST00000549525 ATP9BO43861 1147 aa9.22□□□□□ -0.93
COX6A1-202ENST00000549525 NCOA4Q13772 614 aa9.22□□□□□ -0.93
COX6A1-202ENST00000549525 FOXD4L5Q5VV16 416 aaPredicted RBP9.22□□□□□ -0.93
COX6A1-202ENST00000549525 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
COX6A1-202ENST00000549525 RAB6BQ9NRW1 208 aa9.22□□□□□ -0.93
COX6A1-202ENST00000549525 C14orf37Q86TY3 774 aa9.21□□□□□ -0.94
COX6A1-202ENST00000549525 POLMQ9NP87 494 aaPredicted RBP9.21□□□□□ -0.94
COX6A1-202ENST00000549525 UBR1Q8IWV7 1749 aa9.21□□□□□ -0.94
COX6A1-202ENST00000549525 SCAF11Q99590 1463 aaKnown RBP9.21□□□□□ -0.94
COX6A1-202ENST00000549525 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms