RNA–Protein interactions for RNA: ENST00000548735.1

KRT6A-202, Transcript of keratin 6A, humanhuman

TSL 2

Gene KRT6A, Length 227 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6A-202ENST00000548735 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
KRT6A-202ENST00000548735 RGL2O15211 777 aa13.06□□□□□ -0.32
KRT6A-202ENST00000548735 DIAPH1O60610 1272 aaKnown RBP13.06□□□□□ -0.32
KRT6A-202ENST00000548735 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
KRT6A-202ENST00000548735 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
KRT6A-202ENST00000548735 TAF1DQ9H5J8 278 aaPredicted RBP13.06□□□□□ -0.32
KRT6A-202ENST00000548735 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
KRT6A-202ENST00000548735 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
KRT6A-202ENST00000548735 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
KRT6A-202ENST00000548735 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
KRT6A-202ENST00000548735 CLEC4GQ6UXB4 293 aa13.05□□□□□ -0.32
KRT6A-202ENST00000548735 PNMA8AQ86V59 439 aaPredicted RBP13.05□□□□□ -0.32
KRT6A-202ENST00000548735 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
KRT6A-202ENST00000548735 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
KRT6A-202ENST00000548735 ZNF330Q9Y3S2 320 aaPredicted RBP13.05□□□□□ -0.32
KRT6A-202ENST00000548735 THSD7BQ9C0I4 1608 aa13.05□□□□□ -0.32
KRT6A-202ENST00000548735 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
KRT6A-202ENST00000548735 FKBP4Q02790 459 aaKnown RBP eCLIP13.04□□□□□ -0.32
KRT6A-202ENST00000548735 HACL1Q9UJ83 578 aa13.04□□□□□ -0.32
KRT6A-202ENST00000548735 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
KRT6A-202ENST00000548735 RASSF10A6NK89 507 aa13.03□□□□□ -0.32
KRT6A-202ENST00000548735 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
KRT6A-202ENST00000548735 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
KRT6A-202ENST00000548735 NPR1P16066 1061 aa13.03□□□□□ -0.32
KRT6A-202ENST00000548735 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
KRT6A-202ENST00000548735 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
KRT6A-202ENST00000548735 RTKN2Q8IZC4 609 aa13.03□□□□□ -0.32
KRT6A-202ENST00000548735 WBP1LQ9NX94 342 aa13.03□□□□□ -0.32
KRT6A-202ENST00000548735 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
KRT6A-202ENST00000548735 COL3A1P02461 1466 aaPredicted RBP13.03□□□□□ -0.32
KRT6A-202ENST00000548735 VEGFBP49765 207 aa13.02□□□□□ -0.33
KRT6A-202ENST00000548735 NBPF5PQ86XG9 351 aaPredicted RBP13.02□□□□□ -0.33
KRT6A-202ENST00000548735 C7orf43Q8WVR3 580 aa13.02□□□□□ -0.33
KRT6A-202ENST00000548735 LAMB4A4D0S4 1761 aa13.02□□□□□ -0.33
KRT6A-202ENST00000548735 KLRG2A4D1S0 409 aaPredicted RBP13.01□□□□□ -0.33
KRT6A-202ENST00000548735 ITGBL1O95965 494 aaPredicted RBP13.01□□□□□ -0.33
KRT6A-202ENST00000548735 EPHX2P34913 555 aa13.01□□□□□ -0.33
KRT6A-202ENST00000548735 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
KRT6A-202ENST00000548735 NPC1L1Q9UHC9 1359 aa13.01□□□□□ -0.33
KRT6A-202ENST00000548735 SLC34A2O95436 690 aa13□□□□□ -0.33
KRT6A-202ENST00000548735 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
KRT6A-202ENST00000548735 GPC2Q8N158 579 aa13□□□□□ -0.33
KRT6A-202ENST00000548735 CCDC24Q8N4L8 307 aa13□□□□□ -0.33
KRT6A-202ENST00000548735 IL17REQ8NFR9 667 aa13□□□□□ -0.33
KRT6A-202ENST00000548735 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
KRT6A-202ENST00000548735 ZNF541Q9H0D2 1346 aa12.99□□□□□ -0.33
KRT6A-202ENST00000548735 A1BGP04217 495 aa12.99□□□□□ -0.33
KRT6A-202ENST00000548735 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
KRT6A-202ENST00000548735 LBX1P52954 281 aa12.99□□□□□ -0.33
KRT6A-202ENST00000548735 DEFB115Q30KQ5 88 aa12.99□□□□□ -0.33
KRT6A-202ENST00000548735 GRIPAP1Q4V328 841 aa12.99□□□□□ -0.33
KRT6A-202ENST00000548735 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
KRT6A-202ENST00000548735 FZD9O00144 591 aa12.98□□□□□ -0.33
KRT6A-202ENST00000548735 HSPA8P11142 646 aaKnown RBP12.98□□□□□ -0.33
KRT6A-202ENST00000548735 IARSP41252 1262 aaKnown RBP12.98□□□□□ -0.33
KRT6A-202ENST00000548735 CC2D2BQ6DHV5 1058 aa12.98□□□□□ -0.33
KRT6A-202ENST00000548735 CNTROBQ8N137 903 aa12.98□□□□□ -0.33
KRT6A-202ENST00000548735 JDP2Q8WYK2 163 aa12.98□□□□□ -0.33
KRT6A-202ENST00000548735 PSMD1Q99460 953 aa12.98□□□□□ -0.33
KRT6A-202ENST00000548735 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
KRT6A-202ENST00000548735 RNF123Q5XPI4 1314 aa12.97□□□□□ -0.33
KRT6A-202ENST00000548735 WDR33Q9C0J8 1336 aaKnown RBP12.97□□□□□ -0.33
KRT6A-202ENST00000548735 U2SURPO15042 1029 aaKnown RBP12.97□□□□□ -0.33
KRT6A-202ENST00000548735 SNRPA1P09661 255 aaKnown RBP12.97□□□□□ -0.33
KRT6A-202ENST00000548735 LMOD1P29536 600 aaPredicted RBP12.97□□□□□ -0.33
KRT6A-202ENST00000548735 ECE1P42892 770 aa12.97□□□□□ -0.33
KRT6A-202ENST00000548735 ABHD8Q96I13 439 aa12.97□□□□□ -0.33
KRT6A-202ENST00000548735 BEGAINQ9BUH8 593 aa12.97□□□□□ -0.33
KRT6A-202ENST00000548735 ABT1Q9ULW3 272 aaKnown RBP12.97□□□□□ -0.33
KRT6A-202ENST00000548735 NUP98P52948 1817 aa12.97□□□□□ -0.33
KRT6A-202ENST00000548735 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
KRT6A-202ENST00000548735 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.33
KRT6A-202ENST00000548735 NYXQ9GZU5 481 aa12.96□□□□□ -0.33
KRT6A-202ENST00000548735 NIP7Q9Y221 180 aaKnown RBP eCLIP12.96□□□□□ -0.33
KRT6A-202ENST00000548735 SNED1Q8TER0 1413 aa12.96□□□□□ -0.34
KRT6A-202ENST00000548735 IBTKQ9P2D0 1353 aaPredicted RBP12.95□□□□□ -0.34
KRT6A-202ENST00000548735 PDE4DIPQ5VU43 2346 aa12.95□□□□□ -0.34
KRT6A-202ENST00000548735 KIF7Q2M1P5 1343 aa12.95□□□□□ -0.34
KRT6A-202ENST00000548735 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
KRT6A-202ENST00000548735 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
KRT6A-202ENST00000548735 CRY2Q49AN0 593 aa12.94□□□□□ -0.34
KRT6A-202ENST00000548735 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
KRT6A-202ENST00000548735 SYNE4Q8N205 404 aa12.94□□□□□ -0.34
KRT6A-202ENST00000548735 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
KRT6A-202ENST00000548735 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
KRT6A-202ENST00000548735 CA12O43570 354 aa12.93□□□□□ -0.34
KRT6A-202ENST00000548735 FAM161AQ3B820 660 aa12.93□□□□□ -0.34
KRT6A-202ENST00000548735 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
KRT6A-202ENST00000548735 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
KRT6A-202ENST00000548735 USP16Q9Y5T5 823 aa12.93□□□□□ -0.34
KRT6A-202ENST00000548735 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
KRT6A-202ENST00000548735 USP50Q70EL3 339 aaPredicted RBP12.92□□□□□ -0.34
KRT6A-202ENST00000548735 CAPNS2Q96L46 248 aa12.92□□□□□ -0.34
KRT6A-202ENST00000548735 NUDCQ9Y266 331 aa12.92□□□□□ -0.34
KRT6A-202ENST00000548735 HTATSF1O43719 755 aaKnown RBP12.91□□□□□ -0.34
KRT6A-202ENST00000548735 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
KRT6A-202ENST00000548735 MAP2K2P36507 400 aa12.91□□□□□ -0.34
KRT6A-202ENST00000548735 RGS19P49795 217 aa12.91□□□□□ -0.34
KRT6A-202ENST00000548735 MLLT1Q03111 559 aaPredicted RBP12.91□□□□□ -0.34
KRT6A-202ENST00000548735 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms