RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 SSH3Q8TE77 659 aa9.7□□□□□ -0.86
TMEM106C-208ENST00000548355 UTYO14607 1347 aa9.7□□□□□ -0.86
TMEM106C-208ENST00000548355 AFF2P51816 1311 aa9.7□□□□□ -0.86
TMEM106C-208ENST00000548355 SRGAP3O43295 1099 aa9.69□□□□□ -0.86
TMEM106C-208ENST00000548355 ANP32AP39687 249 aaKnown RBP9.69□□□□□ -0.86
TMEM106C-208ENST00000548355 POLA2Q14181 598 aa9.69□□□□□ -0.86
TMEM106C-208ENST00000548355 GCKRQ14397 625 aa9.69□□□□□ -0.86
TMEM106C-208ENST00000548355 KIF6Q6ZMV9 814 aa9.69□□□□□ -0.86
TMEM106C-208ENST00000548355 TTLL7Q6ZT98 887 aa9.69□□□□□ -0.86
TMEM106C-208ENST00000548355 SMARCC1Q92922 1105 aaPredicted RBP9.69□□□□□ -0.86
TMEM106C-208ENST00000548355 EXOC6BQ9Y2D4 811 aa9.69□□□□□ -0.86
TMEM106C-208ENST00000548355 ZNF330Q9Y3S2 320 aaPredicted RBP9.69□□□□□ -0.86
TMEM106C-208ENST00000548355 ATP5J2-PTCD1G3V325 749 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 SMARCA5O60264 1052 aaPredicted RBP9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 RAB11FIP3O75154 756 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 CYP19A1P11511 503 aaPredicted RBP9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 MTX1Q13505 466 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 HSP90AB4PQ58FF6 505 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 NPM2Q86SE8 214 aaKnown RBP9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 SUCLG2Q96I99 432 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 GJD4Q96KN9 370 aaPredicted RBP9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 SLC4A9Q96Q91 983 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 LRRCC1Q9C099 1032 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 BCL11AQ9H165 835 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 TRPC5Q9UL62 973 aaPredicted RBP9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 ARFGEF2Q9Y6D5 1785 aa9.68□□□□□ -0.86
TMEM106C-208ENST00000548355 SURF6O75683 361 aaKnown RBP9.67□□□□□ -0.86
TMEM106C-208ENST00000548355 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
TMEM106C-208ENST00000548355 BMP2KLQ5H9B9 411 aa9.67□□□□□ -0.86
TMEM106C-208ENST00000548355 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
TMEM106C-208ENST00000548355 ARXQ96QS3 562 aa9.67□□□□□ -0.86
TMEM106C-208ENST00000548355 BICC1Q9H694 974 aaKnown RBP9.67□□□□□ -0.86
TMEM106C-208ENST00000548355 CWC25Q9NXE8 425 aaPredicted RBP9.67□□□□□ -0.86
TMEM106C-208ENST00000548355 THSD7AQ9UPZ6 1657 aa9.67□□□□□ -0.86
TMEM106C-208ENST00000548355 ATRNO75882 1429 aa9.66□□□□□ -0.86
TMEM106C-208ENST00000548355 PALLDQ8WX93 1383 aa9.66□□□□□ -0.86
TMEM106C-208ENST00000548355 A0A087WZG4 1122 aa9.66□□□□□ -0.86
TMEM106C-208ENST00000548355 LOC102724428A0A0B4J2F2 783 aa9.66□□□□□ -0.86
TMEM106C-208ENST00000548355 KCNQ2O43526 872 aa9.66□□□□□ -0.86
TMEM106C-208ENST00000548355 SIK1P57059 783 aa9.66□□□□□ -0.86
TMEM106C-208ENST00000548355 C16orf71Q8IYS4 520 aaPredicted RBP9.66□□□□□ -0.86
TMEM106C-208ENST00000548355 TJP1Q07157 1748 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 NUP188Q5SRE5 1749 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 COL15A1P39059 1388 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 MAP3K15Q6ZN16 1313 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 IL6STP40189 918 aaPredicted RBP9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 OS9Q13438 667 aaPredicted RBP9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 TCIRG1Q13488 830 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 UBE3BQ7Z3V4 1068 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 ERC1Q8IUD2 1116 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 CCDC191Q8NCU4 936 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 KIF1BPQ96EK5 621 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 KAZALD1Q96I82 304 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 UPF2Q9HAU5 1272 aaKnown RBP9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 CCDC87Q9NVE4 849 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 ZBTB1Q9Y2K1 713 aa9.65□□□□□ -0.86
TMEM106C-208ENST00000548355 AFDNP55196 1824 aaKnown RBP9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 H7C1W4 665 aa9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 ONECUT3O60422 494 aaPredicted RBP9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 TTC22Q5TAA0 569 aa9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 RHPN1Q8TCX5 695 aa9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 OTUD7AQ8TE49 926 aaPredicted RBP9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 JARID2Q92833 1246 aaPredicted RBP9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 ISCA1Q9BUE6 129 aa9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 NOP58Q9Y2X3 529 aaKnown RBP9.64□□□□□ -0.87
TMEM106C-208ENST00000548355 ERVV-1B6SEH8 477 aa9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 CRKLP46109 303 aaKnown RBP9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 CASP7P55210 303 aa9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 TRIM28Q13263 835 aaKnown RBP9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 G3BP1Q13283 466 aaKnown RBP eCLIP9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 ITPK1Q13572 414 aa9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 INTS5Q6P9B9 1019 aaKnown RBP9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 SEPT12Q8IYM1 358 aa9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 OSBPL3Q9H4L5 887 aa9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 CICQ96RK0 1608 aaPredicted RBP9.63□□□□□ -0.87
TMEM106C-208ENST00000548355 EIF5BO60841 1220 aaKnown RBP9.62□□□□□ -0.87
TMEM106C-208ENST00000548355 SEC24BO95487 1268 aa9.62□□□□□ -0.87
TMEM106C-208ENST00000548355 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
TMEM106C-208ENST00000548355 MX1P20591 662 aa9.62□□□□□ -0.87
TMEM106C-208ENST00000548355 PDE1AP54750 535 aa9.62□□□□□ -0.87
TMEM106C-208ENST00000548355 RABL6Q3YEC7 729 aaPredicted RBP9.62□□□□□ -0.87
TMEM106C-208ENST00000548355 EPHA10Q5JZY3 1008 aa9.62□□□□□ -0.87
TMEM106C-208ENST00000548355 IL1RAPL2Q9NP60 686 aa9.62□□□□□ -0.87
TMEM106C-208ENST00000548355 PA2G4Q9UQ80 394 aaKnown RBP9.62□□□□□ -0.87
TMEM106C-208ENST00000548355 AOX1Q06278 1338 aa9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 KAT6BQ8WYB5 2073 aa9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 CDC45O75419 566 aa9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 PCCAP05165 728 aaPredicted RBP9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 EIF5P55010 431 aaKnown RBP9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 FOXO4P98177 505 aa9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 HLFQ16534 295 aa9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 RTL5Q5HYW3 569 aaPredicted RBP9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 CASC1Q6TDU7 716 aa9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 LMBR1LQ6UX01 489 aa9.61□□□□□ -0.87
TMEM106C-208ENST00000548355 CLASRPQ8N2M8 674 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms