RNA–Protein interactions for RNA: ENST00000548221.5

NCKAP1L-204, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 3,559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-204ENST00000548221 C9orf78Q9NZ63 289 aaPredicted RBP6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 ZCCHC11Q5TAX3 1644 aaKnown RBP6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 YTHDC2Q9H6S0 1430 aaKnown RBP6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 SURF6O75683 361 aaKnown RBP6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 F13A1P00488 732 aa6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 BRD2P25440 801 aaKnown RBP6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 HDGFL1Q5TGJ6 251 aa6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 RNF20Q5VTR2 975 aa6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 ICE2Q659A1 982 aa6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 DNAJC25Q9H1X3 360 aa6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 ZCCHC17Q9NP64 241 aaKnown RBP6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 CFAP74Q9C0B2 1584 aa6.86□□□□□ -1.31
NCKAP1L-204ENST00000548221 PNMA6AP0CW24 399 aaPredicted RBP6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 CLCN6P51797 869 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 CUL4AQ13619 759 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 LEKR1Q6ZMV7 388 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 MYCBPQ99417 103 aaPredicted RBP6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 MEIS3Q99687 375 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 RIMS2Q9UQ26 1411 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 SYNMO15061 1565 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 TTC21BQ7Z4L5 1316 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 NRDCO43847 1150 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 SNW1Q13573 536 aaKnown RBP6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 CTR9Q6PD62 1173 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 POGZQ7Z3K3 1410 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 DACT1Q9NYF0 836 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 UBTFL1P0CB47 393 aaPredicted RBP6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 FAM193AP78312 1265 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 ST5P78524 1137 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 FAM173BQ6P4H8 233 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 CCDC83Q8IWF9 413 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 SMARCE1Q969G3 411 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 USP16Q9Y5T5 823 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 ADCY10Q96PN6 1610 aa6.85□□□□□ -1.31
NCKAP1L-204ENST00000548221 CCDC69A6NI79 296 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 LTKP29376 864 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 SART3Q15020 963 aaKnown RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 CCDC144BQ3MJ40 725 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 TTC31Q49AM3 519 aaPredicted RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 ZNF530Q6P9A1 599 aaPredicted RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 PROSER2Q86WR7 435 aaPredicted RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 CCDC144CPQ8IYA2 1237 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 MRPL50Q8N5N7 158 aaKnown RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 ESYT1Q9BSJ8 1104 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 ZNF446Q9NWS9 450 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 GEMIN8Q9NWZ8 242 aaKnown RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 LCMT1Q9UIC8 334 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 CLGNO14967 610 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 SEC31AO94979 1220 aaKnown RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 CASTP20810 708 aaKnown RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 OAS2P29728 719 aaKnown RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 KRT85P78386 507 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 E2F4Q16254 413 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 MPRIPQ6WCQ1 1025 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 FAM177A1Q8N128 213 aaPredicted RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 KIF1BPQ96EK5 621 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 TFIP11Q9UBB9 837 aaKnown RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 MRVI1Q9Y6F6 885 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 UHRF1BP1LA0JNW5 1464 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 BANK1Q8NDB2 785 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 DDX54Q8TDD1 881 aaKnown RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 RRP15Q9Y3B9 282 aaKnown RBP6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 JRKLQ9Y4A0 524 aa6.84□□□□□ -1.31
NCKAP1L-204ENST00000548221 PATL2C9JE40 543 aaKnown RBP6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 LIG1P18858 919 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 GJB2P29033 226 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 HOXD11P31277 338 aaPredicted RBP6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 IL13P35225 146 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 PDE1AP54750 535 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 ZRSR1Q15695 479 aaKnown RBP6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 MTHFSDQ2M296 383 aaKnown RBP6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 CCDC30Q5VVM6 783 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 EP400NLQ6ZTU2 488 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 G2E3Q7L622 706 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 RAD50Q92878 1312 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 NSD2O96028 1365 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 A0A1B0GUL7 405 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 URI1O94763 535 aaPredicted RBP6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 GNAI2P04899 355 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 CPA1P15085 419 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 NUTM1Q86Y26 1132 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 LRRC8AQ8IWT6 810 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 FUCA2Q9BTY2 467 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 IL16Q14005 1332 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 ZFYVE16Q7Z3T8 1539 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 ANKRD65E5RJM6 399 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 KIF2AO00139 706 aaPredicted RBP6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 KCNA6P17658 529 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 SLFNL1Q499Z3 407 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 RPAP2Q8IXW5 612 aaPredicted RBP6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 TMEM87AQ8NBN3 555 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 PLEKHF1Q96S99 279 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 YY1AP1Q9H869 796 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 FHOD1Q9Y613 1164 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 TNRQ92752 1358 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 CLTCL1P53675 1640 aa6.83□□□□□ -1.32
NCKAP1L-204ENST00000548221 PRR29P0C7W0 189 aa6.82□□□□□ -1.32
NCKAP1L-204ENST00000548221 PLA2G4AP47712 749 aa6.82□□□□□ -1.32
NCKAP1L-204ENST00000548221 LARP1BQ659C4 914 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms