RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 C8orf34Q49A92 452 aa17■□□□□ 0.31
SMPDL3B-205ENST00000548116 STARD3NLO95772 234 aa16.99■□□□□ 0.31
SMPDL3B-205ENST00000548116 NEXNQ0ZGT2 675 aa16.99■□□□□ 0.31
SMPDL3B-205ENST00000548116 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
SMPDL3B-205ENST00000548116 GRM8O00222 908 aa16.98■□□□□ 0.31
SMPDL3B-205ENST00000548116 ONECUT3O60422 494 aaPredicted RBP16.98■□□□□ 0.31
SMPDL3B-205ENST00000548116 C9orf78Q9NZ63 289 aaPredicted RBP16.98■□□□□ 0.31
SMPDL3B-205ENST00000548116 TRPC5Q9UL62 973 aaPredicted RBP16.98■□□□□ 0.31
SMPDL3B-205ENST00000548116 A0A0G2JS52 829 aa16.98■□□□□ 0.31
SMPDL3B-205ENST00000548116 POLA2Q14181 598 aa16.98■□□□□ 0.31
SMPDL3B-205ENST00000548116 GCKRQ14397 625 aa16.98■□□□□ 0.31
SMPDL3B-205ENST00000548116 SSH3Q8TE77 659 aa16.98■□□□□ 0.31
SMPDL3B-205ENST00000548116 MYT1Q01538 1121 aa16.97■□□□□ 0.31
SMPDL3B-205ENST00000548116 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
SMPDL3B-205ENST00000548116 KAZALD1Q96I82 304 aa16.97■□□□□ 0.31
SMPDL3B-205ENST00000548116 AFDNP55196 1824 aaKnown RBP16.97■□□□□ 0.31
SMPDL3B-205ENST00000548116 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.31
SMPDL3B-205ENST00000548116 MTX1Q13505 466 aa16.96■□□□□ 0.3
SMPDL3B-205ENST00000548116 SUCLG2Q96I99 432 aa16.96■□□□□ 0.3
SMPDL3B-205ENST00000548116 PALLDQ8WX93 1383 aa16.95■□□□□ 0.3
SMPDL3B-205ENST00000548116 LOC102724428A0A0B4J2F2 783 aa16.95■□□□□ 0.3
SMPDL3B-205ENST00000548116 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
SMPDL3B-205ENST00000548116 SIK1P57059 783 aa16.95■□□□□ 0.3
SMPDL3B-205ENST00000548116 PTF1AQ7RTS3 328 aa16.94■□□□□ 0.3
SMPDL3B-205ENST00000548116 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
SMPDL3B-205ENST00000548116 EXOC6BQ9Y2D4 811 aa16.94■□□□□ 0.3
SMPDL3B-205ENST00000548116 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
SMPDL3B-205ENST00000548116 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
SMPDL3B-205ENST00000548116 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
SMPDL3B-205ENST00000548116 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
SMPDL3B-205ENST00000548116 SRGAP3O43295 1099 aa16.93■□□□□ 0.3
SMPDL3B-205ENST00000548116 ITPK1Q13572 414 aa16.93■□□□□ 0.3
SMPDL3B-205ENST00000548116 HDAC5Q9UQL6 1122 aa16.93■□□□□ 0.3
SMPDL3B-205ENST00000548116 RREB1Q92766 1687 aa16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 APBB1O00213 710 aa16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 FAM182BQ5T319 152 aa16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 SEPT12Q8IYM1 358 aa16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 C16orf71Q8IYS4 520 aaPredicted RBP16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 ZNF330Q9Y3S2 320 aaPredicted RBP16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 CASP7P55210 303 aa16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 INTS5Q6P9B9 1019 aaKnown RBP16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 PLEKHM2Q8IWE5 1019 aa16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
SMPDL3B-205ENST00000548116 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
SMPDL3B-205ENST00000548116 OTUD7AQ8TE49 926 aaPredicted RBP16.91■□□□□ 0.3
SMPDL3B-205ENST00000548116 COL15A1P39059 1388 aa16.91■□□□□ 0.3
SMPDL3B-205ENST00000548116 BTAF1O14981 1849 aa16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 IL6STP40189 918 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 EPHA10Q5JZY3 1008 aa16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 JARID2Q92833 1246 aaPredicted RBP16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 ISCA1Q9BUE6 129 aa16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 MAP3K15Q6ZN16 1313 aa16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 A0A087WZG4 1122 aa16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 H7C1W4 665 aa16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 TCIRG1Q13488 830 aa16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 KIF6Q6ZMV9 814 aa16.9■□□□□ 0.3
SMPDL3B-205ENST00000548116 COL5A3P25940 1745 aaPredicted RBP16.89■□□□□ 0.3
SMPDL3B-205ENST00000548116 SBF2Q86WG5 1849 aa16.89■□□□□ 0.3
SMPDL3B-205ENST00000548116 CRKLP46109 303 aaKnown RBP16.89■□□□□ 0.29
SMPDL3B-205ENST00000548116 UBE3BQ7Z3V4 1068 aa16.89■□□□□ 0.29
SMPDL3B-205ENST00000548116 CCDC191Q8NCU4 936 aa16.89■□□□□ 0.29
SMPDL3B-205ENST00000548116 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
SMPDL3B-205ENST00000548116 CCDC87Q9NVE4 849 aa16.89■□□□□ 0.29
SMPDL3B-205ENST00000548116 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.29
SMPDL3B-205ENST00000548116 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
SMPDL3B-205ENST00000548116 SURF6O75683 361 aaKnown RBP16.88■□□□□ 0.29
SMPDL3B-205ENST00000548116 EIF5P55010 431 aaKnown RBP16.88■□□□□ 0.29
SMPDL3B-205ENST00000548116 TRIM28Q13263 835 aaKnown RBP16.88■□□□□ 0.29
SMPDL3B-205ENST00000548116 HLFQ16534 295 aa16.88■□□□□ 0.29
SMPDL3B-205ENST00000548116 ZBTB47Q9UFB7 747 aaPredicted RBP16.88■□□□□ 0.29
SMPDL3B-205ENST00000548116 BMP2KLQ5H9B9 411 aa16.88■□□□□ 0.29
SMPDL3B-205ENST00000548116 GIGYF2Q6Y7W6 1299 aaKnown RBP16.88■□□□□ 0.29
SMPDL3B-205ENST00000548116 SALL3Q9BXA9 1300 aa16.87■□□□□ 0.29
SMPDL3B-205ENST00000548116 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
SMPDL3B-205ENST00000548116 RABL6Q3YEC7 729 aaPredicted RBP16.87■□□□□ 0.29
SMPDL3B-205ENST00000548116 SEC24BO95487 1268 aa16.86■□□□□ 0.29
SMPDL3B-205ENST00000548116 LINC00116Q8NCU8 138 aa16.86■□□□□ 0.29
SMPDL3B-205ENST00000548116 BCL11AQ9H165 835 aa16.86■□□□□ 0.29
SMPDL3B-205ENST00000548116 PA2G4Q9UQ80 394 aaKnown RBP16.86■□□□□ 0.29
SMPDL3B-205ENST00000548116 NUP98P52948 1817 aa16.85■□□□□ 0.29
SMPDL3B-205ENST00000548116 ERVV-1B6SEH8 477 aa16.85■□□□□ 0.29
SMPDL3B-205ENST00000548116 GSPT1P15170 499 aaKnown RBP16.85■□□□□ 0.29
SMPDL3B-205ENST00000548116 DZIP3Q86Y13 1208 aaKnown RBP16.85■□□□□ 0.29
SMPDL3B-205ENST00000548116 RHPN1Q8TCX5 695 aa16.85■□□□□ 0.29
SMPDL3B-205ENST00000548116 ARXQ96QS3 562 aa16.85■□□□□ 0.29
SMPDL3B-205ENST00000548116 BRWD3Q6RI45 1802 aa16.85■□□□□ 0.29
SMPDL3B-205ENST00000548116 ANKRD36CQ5JPF3 1778 aa16.85■□□□□ 0.29
SMPDL3B-205ENST00000548116 FOXO4P98177 505 aa16.84■□□□□ 0.29
SMPDL3B-205ENST00000548116 TBC1D2BQ9UPU7 963 aa16.84■□□□□ 0.29
SMPDL3B-205ENST00000548116 KCNQ4P56696 695 aa16.84■□□□□ 0.29
SMPDL3B-205ENST00000548116 HSP90AB4PQ58FF6 505 aa16.84■□□□□ 0.29
SMPDL3B-205ENST00000548116 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
SMPDL3B-205ENST00000548116 OSBPL3Q9H4L5 887 aa16.84■□□□□ 0.29
SMPDL3B-205ENST00000548116 RFX5P48382 616 aaPredicted RBP16.83■□□□□ 0.28
SMPDL3B-205ENST00000548116 KIF1BPQ96EK5 621 aa16.83■□□□□ 0.28
SMPDL3B-205ENST00000548116 IL1RAPL2Q9NP60 686 aa16.83■□□□□ 0.28
SMPDL3B-205ENST00000548116 PDE1AP54750 535 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms