RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
CCDC59-202ENST00000547758 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.52
CCDC59-202ENST00000547758 STARD3NLO95772 234 aa18.33■□□□□ 0.52
CCDC59-202ENST00000547758 FXR2P51116 673 aaKnown RBP eCLIP18.33■□□□□ 0.52
CCDC59-202ENST00000547758 PRR5LQ6MZQ0 368 aa18.33■□□□□ 0.52
CCDC59-202ENST00000547758 HMOX1P09601 288 aa18.32■□□□□ 0.52
CCDC59-202ENST00000547758 CCDC24Q8N4L8 307 aa18.32■□□□□ 0.52
CCDC59-202ENST00000547758 PRDM10Q9NQV6 1147 aa18.32■□□□□ 0.52
CCDC59-202ENST00000547758 MTHFSDQ2M296 383 aaKnown RBP18.31■□□□□ 0.52
CCDC59-202ENST00000547758 TTC5Q8N0Z6 440 aa18.31■□□□□ 0.52
CCDC59-202ENST00000547758 PASKQ96RG2 1323 aa18.3■□□□□ 0.52
CCDC59-202ENST00000547758 CNKSR1Q969H4 720 aa18.3■□□□□ 0.52
CCDC59-202ENST00000547758 KNSTRNQ9Y448 316 aa18.3■□□□□ 0.52
CCDC59-202ENST00000547758 IQCA1LA6NCM1 817 aa18.29■□□□□ 0.52
CCDC59-202ENST00000547758 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCDC59-202ENST00000547758 SOGA3Q5TF21 947 aa18.29■□□□□ 0.52
CCDC59-202ENST00000547758 PRPF40BQ6NWY9 871 aaKnown RBP18.29■□□□□ 0.52
CCDC59-202ENST00000547758 LDHDQ86WU2 507 aa18.29■□□□□ 0.52
CCDC59-202ENST00000547758 AIDAQ96BJ3 306 aa18.29■□□□□ 0.52
CCDC59-202ENST00000547758 TBC1D2BQ9UPU7 963 aa18.29■□□□□ 0.52
CCDC59-202ENST00000547758 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
CCDC59-202ENST00000547758 ADAMTSL1Q8N6G6 1762 aa18.28■□□□□ 0.52
CCDC59-202ENST00000547758 HSPA5P11021 654 aaKnown RBP18.28■□□□□ 0.52
CCDC59-202ENST00000547758 CTCFP49711 727 aaPredicted RBP18.28■□□□□ 0.52
CCDC59-202ENST00000547758 STYK1Q6J9G0 422 aa18.28■□□□□ 0.52
CCDC59-202ENST00000547758 CNBD1Q8NA66 436 aa18.28■□□□□ 0.52
CCDC59-202ENST00000547758 SP7Q8TDD2 431 aaPredicted RBP18.28■□□□□ 0.52
CCDC59-202ENST00000547758 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
CCDC59-202ENST00000547758 NPHP1O15259 732 aa18.27■□□□□ 0.52
CCDC59-202ENST00000547758 SRGNP10124 158 aa18.27■□□□□ 0.52
CCDC59-202ENST00000547758 ST5P78524 1137 aa18.27■□□□□ 0.52
CCDC59-202ENST00000547758 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
CCDC59-202ENST00000547758 L3MBTL3Q96JM7 780 aaPredicted RBP18.27■□□□□ 0.52
CCDC59-202ENST00000547758 SETDB2Q96T68 719 aa18.27■□□□□ 0.52
CCDC59-202ENST00000547758 TAF1DQ9H5J8 278 aaPredicted RBP18.27■□□□□ 0.52
CCDC59-202ENST00000547758 TMEM88BA6NKF7 163 aa18.26■□□□□ 0.51
CCDC59-202ENST00000547758 IL6STP40189 918 aaPredicted RBP18.26■□□□□ 0.51
CCDC59-202ENST00000547758 VEGFBP49765 207 aa18.26■□□□□ 0.51
CCDC59-202ENST00000547758 MASTLQ96GX5 879 aa18.26■□□□□ 0.51
CCDC59-202ENST00000547758 TEX13AQ9BXU3 409 aaPredicted RBP18.26■□□□□ 0.51
CCDC59-202ENST00000547758 ZNF790Q6PG37 636 aa18.25■□□□□ 0.51
CCDC59-202ENST00000547758 CAMTA2O94983 1202 aa18.24■□□□□ 0.51
CCDC59-202ENST00000547758 AMER1Q5JTC6 1135 aaPredicted RBP18.24■□□□□ 0.51
CCDC59-202ENST00000547758 ITGBL1O95965 494 aaPredicted RBP18.23■□□□□ 0.51
CCDC59-202ENST00000547758 TEFQ10587 303 aa18.23■□□□□ 0.51
CCDC59-202ENST00000547758 EAPPQ56P03 285 aaPredicted RBP18.23■□□□□ 0.51
CCDC59-202ENST00000547758 NPM2Q86SE8 214 aaKnown RBP18.23■□□□□ 0.51
CCDC59-202ENST00000547758 WBP1LQ9NX94 342 aa18.23■□□□□ 0.51
CCDC59-202ENST00000547758 DIAPH1O60610 1272 aaKnown RBP18.22■□□□□ 0.51
CCDC59-202ENST00000547758 A1BGP04217 495 aa18.22■□□□□ 0.51
CCDC59-202ENST00000547758 LBX1P52954 281 aa18.22■□□□□ 0.51
CCDC59-202ENST00000547758 CCDC93Q567U6 631 aa18.22■□□□□ 0.51
CCDC59-202ENST00000547758 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
CCDC59-202ENST00000547758 ZNF541Q9H0D2 1346 aa18.22■□□□□ 0.51
CCDC59-202ENST00000547758 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
CCDC59-202ENST00000547758 HACL1Q9UJ83 578 aa18.21■□□□□ 0.51
CCDC59-202ENST00000547758 FKBP4Q02790 459 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC59-202ENST00000547758 DZIP3Q86Y13 1208 aaKnown RBP18.2■□□□□ 0.5
CCDC59-202ENST00000547758 IL17REQ8NFR9 667 aa18.2■□□□□ 0.5
CCDC59-202ENST00000547758 CLEC11AQ9Y240 323 aa18.2■□□□□ 0.5
CCDC59-202ENST00000547758 RASSF10A6NK89 507 aa18.19■□□□□ 0.5
CCDC59-202ENST00000547758 GNAT3A8MTJ3 354 aa18.19■□□□□ 0.5
CCDC59-202ENST00000547758 HAX1O00165 279 aa18.19■□□□□ 0.5
CCDC59-202ENST00000547758 SLC34A2O95436 690 aa18.19■□□□□ 0.5
CCDC59-202ENST00000547758 EPHX2P34913 555 aa18.19■□□□□ 0.5
CCDC59-202ENST00000547758 TRPM7Q96QT4 1865 aa18.19■□□□□ 0.5
CCDC59-202ENST00000547758 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
CCDC59-202ENST00000547758 THSD7BQ9C0I4 1608 aa18.19■□□□□ 0.5
CCDC59-202ENST00000547758 HSPA8P11142 646 aaKnown RBP18.18■□□□□ 0.5
CCDC59-202ENST00000547758 NPR1P16066 1061 aa18.18■□□□□ 0.5
CCDC59-202ENST00000547758 NBPF5PQ86XG9 351 aaPredicted RBP18.18■□□□□ 0.5
CCDC59-202ENST00000547758 GAS2L2Q8NHY3 880 aa18.18■□□□□ 0.5
CCDC59-202ENST00000547758 COL3A1P02461 1466 aaPredicted RBP18.18■□□□□ 0.5
CCDC59-202ENST00000547758 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
CCDC59-202ENST00000547758 DEFB115Q30KQ5 88 aa18.17■□□□□ 0.5
CCDC59-202ENST00000547758 PNMA8AQ86V59 439 aaPredicted RBP18.17■□□□□ 0.5
CCDC59-202ENST00000547758 ABHD8Q96I13 439 aa18.17■□□□□ 0.5
CCDC59-202ENST00000547758 RNF123Q5XPI4 1314 aa18.17■□□□□ 0.5
CCDC59-202ENST00000547758 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
CCDC59-202ENST00000547758 MAP1SQ66K74 1059 aaPredicted RBP18.16■□□□□ 0.5
CCDC59-202ENST00000547758 CLEC4GQ6UXB4 293 aa18.16■□□□□ 0.5
CCDC59-202ENST00000547758 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
CCDC59-202ENST00000547758 CNTROBQ8N137 903 aa18.16■□□□□ 0.5
CCDC59-202ENST00000547758 ZNF652Q9Y2D9 606 aa18.16■□□□□ 0.5
CCDC59-202ENST00000547758 CEMIPQ8WUJ3 1361 aa18.16■□□□□ 0.5
CCDC59-202ENST00000547758 KLRG2A4D1S0 409 aaPredicted RBP18.15■□□□□ 0.5
CCDC59-202ENST00000547758 PIP4K2AP48426 406 aaPredicted RBP18.15■□□□□ 0.5
CCDC59-202ENST00000547758 MAP2K1Q02750 393 aaPredicted RBP18.15■□□□□ 0.5
CCDC59-202ENST00000547758 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
CCDC59-202ENST00000547758 OLFM4Q6UX06 510 aa18.15■□□□□ 0.5
CCDC59-202ENST00000547758 WDR33Q9C0J8 1336 aaKnown RBP18.15■□□□□ 0.5
CCDC59-202ENST00000547758 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
CCDC59-202ENST00000547758 FZD9O00144 591 aa18.14■□□□□ 0.49
CCDC59-202ENST00000547758 KCNQ3O43525 872 aa18.14■□□□□ 0.49
CCDC59-202ENST00000547758 IARSP41252 1262 aaKnown RBP18.14■□□□□ 0.49
CCDC59-202ENST00000547758 ABT1Q9ULW3 272 aaKnown RBP18.14■□□□□ 0.49
CCDC59-202ENST00000547758 SSUH2Q9Y2M2 353 aa18.14■□□□□ 0.49
CCDC59-202ENST00000547758 BTBD11A6QL63 1104 aa18.13■□□□□ 0.49
CCDC59-202ENST00000547758 U2SURPO15042 1029 aaKnown RBP18.13■□□□□ 0.49
CCDC59-202ENST00000547758 GPC2Q8N158 579 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms