RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 KLHL40Q2TBA0 621 aa18.86■□□□□ 0.61
BRF1-212ENST00000547562 IFNL2Q8IZJ0 200 aa18.86■□□□□ 0.61
BRF1-212ENST00000547562 PANK2Q9BZ23 570 aa18.86■□□□□ 0.61
BRF1-212ENST00000547562 GRPEL1Q9HAV7 217 aa18.86■□□□□ 0.61
BRF1-212ENST00000547562 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
BRF1-212ENST00000547562 MCTP1Q6DN14 999 aa18.85■□□□□ 0.61
BRF1-212ENST00000547562 ZDHHC9Q9Y397 364 aa18.85■□□□□ 0.61
BRF1-212ENST00000547562 RAD50Q92878 1312 aa18.85■□□□□ 0.61
BRF1-212ENST00000547562 CSB-PGBD3P0DP91 1061 aa18.85■□□□□ 0.61
BRF1-212ENST00000547562 CADPS2Q86UW7 1296 aa18.85■□□□□ 0.61
BRF1-212ENST00000547562 CABLES1Q8TDN4 633 aa18.85■□□□□ 0.61
BRF1-212ENST00000547562 KAZALD1Q96I82 304 aa18.85■□□□□ 0.61
BRF1-212ENST00000547562 SUCLG2Q96I99 432 aa18.85■□□□□ 0.61
BRF1-212ENST00000547562 PA2G4Q9UQ80 394 aaKnown RBP18.85■□□□□ 0.61
BRF1-212ENST00000547562 MRC1P22897 1456 aa18.85■□□□□ 0.61
BRF1-212ENST00000547562 DDX49Q9Y6V7 483 aaKnown RBP18.84■□□□□ 0.61
BRF1-212ENST00000547562 LARP1Q6PKG0 1096 aaKnown RBP18.84■□□□□ 0.61
BRF1-212ENST00000547562 RIC3Q7Z5B4 369 aa18.84■□□□□ 0.61
BRF1-212ENST00000547562 FAM43AQ8N2R8 423 aa18.84■□□□□ 0.61
BRF1-212ENST00000547562 IGKV5-2P06315 115 aa18.83■□□□□ 0.61
BRF1-212ENST00000547562 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.61
BRF1-212ENST00000547562 BICC1Q9H694 974 aaKnown RBP18.83■□□□□ 0.61
BRF1-212ENST00000547562 ECHDC1Q9NTX5 307 aa18.83■□□□□ 0.61
BRF1-212ENST00000547562 INTS4Q96HW7 963 aaKnown RBP18.83■□□□□ 0.6
BRF1-212ENST00000547562 GPATCH3Q96I76 525 aa18.83■□□□□ 0.6
BRF1-212ENST00000547562 ZNF496Q96IT1 587 aaPredicted RBP18.83■□□□□ 0.6
BRF1-212ENST00000547562 LSG1Q9H089 658 aaKnown RBP18.83■□□□□ 0.6
BRF1-212ENST00000547562 CHRNA2Q15822 529 aa18.82■□□□□ 0.6
BRF1-212ENST00000547562 GAS2L3Q86XJ1 694 aa18.82■□□□□ 0.6
BRF1-212ENST00000547562 DCAF5Q96JK2 942 aa18.82■□□□□ 0.6
BRF1-212ENST00000547562 LMBRD1Q9NUN5 540 aa18.82■□□□□ 0.6
BRF1-212ENST00000547562 IFIT2P09913 472 aaKnown RBP18.82■□□□□ 0.6
BRF1-212ENST00000547562 MYL6BP14649 208 aa18.82■□□□□ 0.6
BRF1-212ENST00000547562 NEXNQ0ZGT2 675 aa18.81■□□□□ 0.6
BRF1-212ENST00000547562 CWC27Q6UX04 472 aaKnown RBP18.81■□□□□ 0.6
BRF1-212ENST00000547562 XAGE3Q8WTP9 111 aa18.81■□□□□ 0.6
BRF1-212ENST00000547562 SPATA31A3Q5VYP0 1347 aa18.81■□□□□ 0.6
BRF1-212ENST00000547562 NEURL1BA8MQ27 555 aa18.81■□□□□ 0.6
BRF1-212ENST00000547562 CYP27B1O15528 508 aa18.81■□□□□ 0.6
BRF1-212ENST00000547562 CPDO75976 1380 aa18.8■□□□□ 0.6
BRF1-212ENST00000547562 KIAA1211Q6ZU35 1233 aa18.8■□□□□ 0.6
BRF1-212ENST00000547562 NOL8Q76FK4 1167 aaKnown RBP18.8■□□□□ 0.6
BRF1-212ENST00000547562 COPS6Q7L5N1 327 aa18.8■□□□□ 0.6
BRF1-212ENST00000547562 AACSQ86V21 672 aa18.8■□□□□ 0.6
BRF1-212ENST00000547562 SNRPA1P09661 255 aaKnown RBP18.8■□□□□ 0.6
BRF1-212ENST00000547562 TTC5Q8N0Z6 440 aa18.8■□□□□ 0.6
BRF1-212ENST00000547562 DIAPH3Q9NSV4 1193 aa18.8■□□□□ 0.6
BRF1-212ENST00000547562 SASH1O94885 1247 aa18.79■□□□□ 0.6
BRF1-212ENST00000547562 G3BP1Q13283 466 aaKnown RBP eCLIP18.79■□□□□ 0.6
BRF1-212ENST00000547562 GCKRQ14397 625 aa18.79■□□□□ 0.6
BRF1-212ENST00000547562 METTL22Q9BUU2 404 aaPredicted RBP18.79■□□□□ 0.6
BRF1-212ENST00000547562 SNX14Q9Y5W7 946 aa18.79■□□□□ 0.6
BRF1-212ENST00000547562 AFDNP55196 1824 aaKnown RBP18.79■□□□□ 0.6
BRF1-212ENST00000547562 LRP10Q7Z4F1 713 aa18.79■□□□□ 0.6
BRF1-212ENST00000547562 RUFY2Q8WXA3 655 aa18.79■□□□□ 0.6
BRF1-212ENST00000547562 PARP4Q9UKK3 1724 aaKnown RBP18.79■□□□□ 0.6
BRF1-212ENST00000547562 BRD1O95696 1058 aa18.78■□□□□ 0.6
BRF1-212ENST00000547562 USP16Q9Y5T5 823 aa18.78■□□□□ 0.6
BRF1-212ENST00000547562 XIRP1Q702N8 1843 aaKnown RBP18.78■□□□□ 0.6
BRF1-212ENST00000547562 EVI5LQ96CN4 794 aa18.78■□□□□ 0.6
BRF1-212ENST00000547562 FMNL2Q96PY5 1086 aa18.78■□□□□ 0.6
BRF1-212ENST00000547562 MYD88Q99836 296 aa18.78■□□□□ 0.6
BRF1-212ENST00000547562 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.6
BRF1-212ENST00000547562 ANKRD13DQ6ZTN6 518 aa18.77■□□□□ 0.6
BRF1-212ENST00000547562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.77■□□□□ 0.6
BRF1-212ENST00000547562 ARFGEF2Q9Y6D5 1785 aa18.77■□□□□ 0.59
BRF1-212ENST00000547562 RASEFQ8IZ41 740 aa18.76■□□□□ 0.59
BRF1-212ENST00000547562 EAF2Q96CJ1 260 aaPredicted RBP18.76■□□□□ 0.59
BRF1-212ENST00000547562 PRPF40AO75400 957 aaKnown RBP18.76■□□□□ 0.59
BRF1-212ENST00000547562 TTC14Q96N46 770 aa18.75■□□□□ 0.59
BRF1-212ENST00000547562 GLI3P10071 1580 aa18.75■□□□□ 0.59
BRF1-212ENST00000547562 CABP4P57796 275 aa18.74■□□□□ 0.59
BRF1-212ENST00000547562 EPHA10Q5JZY3 1008 aa18.74■□□□□ 0.59
BRF1-212ENST00000547562 CAVIN1Q6NZI2 390 aaKnown RBP18.74■□□□□ 0.59
BRF1-212ENST00000547562 SIL1Q9H173 461 aa18.74■□□□□ 0.59
BRF1-212ENST00000547562 NCLP19338 710 aaKnown RBP18.74■□□□□ 0.59
BRF1-212ENST00000547562 FOXD4L5Q5VV16 416 aaPredicted RBP18.74■□□□□ 0.59
BRF1-212ENST00000547562 FOXD4L4Q8WXT5 416 aaPredicted RBP18.74■□□□□ 0.59
BRF1-212ENST00000547562 CCDC8Q9H0W5 538 aaPredicted RBP18.74■□□□□ 0.59
BRF1-212ENST00000547562 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
BRF1-212ENST00000547562 ZNF445P59923 1031 aa18.73■□□□□ 0.59
BRF1-212ENST00000547562 PTH1RQ03431 593 aa18.73■□□□□ 0.59
BRF1-212ENST00000547562 KLHDC4Q8TBB5 520 aa18.73■□□□□ 0.59
BRF1-212ENST00000547562 GPT2Q8TD30 523 aa18.73■□□□□ 0.59
BRF1-212ENST00000547562 CHAMP1Q96JM3 812 aa18.73■□□□□ 0.59
BRF1-212ENST00000547562 TLR7Q9NYK1 1049 aaKnown RBP18.73■□□□□ 0.59
BRF1-212ENST00000547562 DNAJC5Q9H3Z4 198 aa18.72■□□□□ 0.59
BRF1-212ENST00000547562 HIP1O00291 1037 aa18.72■□□□□ 0.59
BRF1-212ENST00000547562 AK2P54819 239 aa18.72■□□□□ 0.59
BRF1-212ENST00000547562 ZSCAN23Q3MJ62 389 aa18.72■□□□□ 0.59
BRF1-212ENST00000547562 BRINP3Q76B58 766 aa18.71■□□□□ 0.59
BRF1-212ENST00000547562 COL15A1P39059 1388 aa18.71■□□□□ 0.59
BRF1-212ENST00000547562 KCNB2Q92953 911 aa18.71■□□□□ 0.59
BRF1-212ENST00000547562 COPRSQ9NQ92 184 aa18.71■□□□□ 0.59
BRF1-212ENST00000547562 RRAGDQ9NQL2 400 aaPredicted RBP18.71■□□□□ 0.59
BRF1-212ENST00000547562 LIMCH1Q9UPQ0 1083 aa18.71■□□□□ 0.59
BRF1-212ENST00000547562 CCDC171Q6TFL3 1326 aa18.7■□□□□ 0.58
BRF1-212ENST00000547562 CASTP20810 708 aaKnown RBP18.7■□□□□ 0.58
BRF1-212ENST00000547562 HSPA2P54652 639 aa18.7■□□□□ 0.58
BRF1-212ENST00000547562 WDR17Q8IZU2 1322 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms