RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 KLRG1Q96E93 195 aa15.73■□□□□ 0.11
HDAC7-226ENST00000547259 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
HDAC7-226ENST00000547259 BRIP1Q9BX63 1249 aa15.73■□□□□ 0.11
HDAC7-226ENST00000547259 TRIM35Q9UPQ4 493 aa15.73■□□□□ 0.11
HDAC7-226ENST00000547259 BCL2L12Q9HB09 334 aa15.72■□□□□ 0.11
HDAC7-226ENST00000547259 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
HDAC7-226ENST00000547259 ZBED9Q6R2W3 1325 aa15.71■□□□□ 0.11
HDAC7-226ENST00000547259 THUMPD2Q9BTF0 503 aaKnown RBP15.71■□□□□ 0.11
HDAC7-226ENST00000547259 KDM3BQ7LBC6 1761 aa15.71■□□□□ 0.11
HDAC7-226ENST00000547259 CEMIPQ8WUJ3 1361 aa15.71■□□□□ 0.11
HDAC7-226ENST00000547259 NPHP1O15259 732 aa15.7■□□□□ 0.1
HDAC7-226ENST00000547259 SOGA3Q5TF21 947 aa15.7■□□□□ 0.1
HDAC7-226ENST00000547259 BICDL1Q6ZP65 573 aa15.7■□□□□ 0.1
HDAC7-226ENST00000547259 WWC1Q8IX03 1113 aa15.7■□□□□ 0.1
HDAC7-226ENST00000547259 IL17REQ8NFR9 667 aa15.7■□□□□ 0.1
HDAC7-226ENST00000547259 ZNF496Q96IT1 587 aaPredicted RBP15.7■□□□□ 0.1
HDAC7-226ENST00000547259 SETDB2Q96T68 719 aa15.7■□□□□ 0.1
HDAC7-226ENST00000547259 CARMIL3Q8ND23 1372 aa15.7■□□□□ 0.1
HDAC7-226ENST00000547259 DICER1Q9UPY3 1922 aaKnown RBP15.69■□□□□ 0.1
HDAC7-226ENST00000547259 RASSF7Q02833 373 aa15.69■□□□□ 0.1
HDAC7-226ENST00000547259 CALD1Q05682 793 aaKnown RBP15.69■□□□□ 0.1
HDAC7-226ENST00000547259 JMYQ8N9B5 988 aa15.69■□□□□ 0.1
HDAC7-226ENST00000547259 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
HDAC7-226ENST00000547259 ZNF622Q969S3 477 aaKnown RBP eCLIP15.69■□□□□ 0.1
HDAC7-226ENST00000547259 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
HDAC7-226ENST00000547259 ST5P78524 1137 aa15.68■□□□□ 0.1
HDAC7-226ENST00000547259 ZNF330Q9Y3S2 320 aaPredicted RBP15.68■□□□□ 0.1
HDAC7-226ENST00000547259 PCNTO95613 3336 aa15.68■□□□□ 0.1
HDAC7-226ENST00000547259 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
HDAC7-226ENST00000547259 TBC1D9BQ66K14 1250 aa15.67■□□□□ 0.1
HDAC7-226ENST00000547259 CLEC4GQ6UXB4 293 aa15.67■□□□□ 0.1
HDAC7-226ENST00000547259 WDR63Q8IWG1 891 aa15.67■□□□□ 0.1
HDAC7-226ENST00000547259 CNBD1Q8NA66 436 aa15.67■□□□□ 0.1
HDAC7-226ENST00000547259 TBC1D2BQ9UPU7 963 aa15.67■□□□□ 0.1
HDAC7-226ENST00000547259 ZNF652Q9Y2D9 606 aa15.67■□□□□ 0.1
HDAC7-226ENST00000547259 RGL2O15211 777 aa15.66■□□□□ 0.1
HDAC7-226ENST00000547259 PRR5LQ6MZQ0 368 aa15.66■□□□□ 0.1
HDAC7-226ENST00000547259 LAS1LQ9Y4W2 734 aaKnown RBP15.66■□□□□ 0.1
HDAC7-226ENST00000547259 SCN7AQ01118 1682 aa15.66■□□□□ 0.1
HDAC7-226ENST00000547259 LTBP3Q9NS15 1303 aa15.66■□□□□ 0.1
HDAC7-226ENST00000547259 FER1L6Q2WGJ9 1857 aa15.65■□□□□ 0.1
HDAC7-226ENST00000547259 NFKBIEO00221 500 aa15.65■□□□□ 0.1
HDAC7-226ENST00000547259 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
HDAC7-226ENST00000547259 ERFEQ4G0M1 354 aa15.65■□□□□ 0.1
HDAC7-226ENST00000547259 STYK1Q6J9G0 422 aa15.65■□□□□ 0.1
HDAC7-226ENST00000547259 TIAM2Q8IVF5 1701 aa15.65■□□□□ 0.1
HDAC7-226ENST00000547259 ANKRD31Q8N7Z5 1873 aa15.65■□□□□ 0.1
HDAC7-226ENST00000547259 IL16Q14005 1332 aa15.65■□□□□ 0.1
HDAC7-226ENST00000547259 A1BGP04217 495 aa15.64■□□□□ 0.09
HDAC7-226ENST00000547259 SNRPA1P09661 255 aaKnown RBP15.64■□□□□ 0.09
HDAC7-226ENST00000547259 GNAI1P63096 354 aa15.64■□□□□ 0.09
HDAC7-226ENST00000547259 DZIP3Q86Y13 1208 aaKnown RBP15.64■□□□□ 0.09
HDAC7-226ENST00000547259 MASTLQ96GX5 879 aa15.64■□□□□ 0.09
HDAC7-226ENST00000547259 TAOK3Q9H2K8 898 aa15.64■□□□□ 0.09
HDAC7-226ENST00000547259 IFT57Q9NWB7 429 aa15.64■□□□□ 0.09
HDAC7-226ENST00000547259 C21orf2O43822 256 aa15.63■□□□□ 0.09
HDAC7-226ENST00000547259 TAF7Q15545 349 aaPredicted RBP15.63■□□□□ 0.09
HDAC7-226ENST00000547259 CAMTA2O94983 1202 aa15.62■□□□□ 0.09
HDAC7-226ENST00000547259 SRGNP10124 158 aa15.62■□□□□ 0.09
HDAC7-226ENST00000547259 TPTE2Q6XPS3 522 aa15.62■□□□□ 0.09
HDAC7-226ENST00000547259 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
HDAC7-226ENST00000547259 TSPYL4Q9UJ04 414 aa15.62■□□□□ 0.09
HDAC7-226ENST00000547259 E9PSI1 815 aa15.61■□□□□ 0.09
HDAC7-226ENST00000547259 HTRA3P83110 453 aa15.61■□□□□ 0.09
HDAC7-226ENST00000547259 NBPF5PQ86XG9 351 aaPredicted RBP15.61■□□□□ 0.09
HDAC7-226ENST00000547259 MYH16Q9H6N6 1097 aa15.61■□□□□ 0.09
HDAC7-226ENST00000547259 LAMB4A4D0S4 1761 aa15.61■□□□□ 0.09
HDAC7-226ENST00000547259 ARFGEF2Q9Y6D5 1785 aa15.6■□□□□ 0.09
HDAC7-226ENST00000547259 IQCA1LA6NCM1 817 aa15.6■□□□□ 0.09
HDAC7-226ENST00000547259 ZNF853P0CG23 659 aa15.6■□□□□ 0.09
HDAC7-226ENST00000547259 PRELPP51888 382 aa15.6■□□□□ 0.09
HDAC7-226ENST00000547259 PRPF40BQ6NWY9 871 aaKnown RBP15.6■□□□□ 0.09
HDAC7-226ENST00000547259 CDCA7LQ96GN5 454 aa15.6■□□□□ 0.09
HDAC7-226ENST00000547259 SPINK5Q9NQ38 1064 aaPredicted RBP15.6■□□□□ 0.09
HDAC7-226ENST00000547259 MBIPQ9NS73 344 aa15.6■□□□□ 0.09
HDAC7-226ENST00000547259 BABAM1Q9NWV8 329 aa15.6■□□□□ 0.09
HDAC7-226ENST00000547259 MIS18AQ9NYP9 233 aa15.6■□□□□ 0.09
HDAC7-226ENST00000547259 FANCIQ9NVI1 1328 aa15.6■□□□□ 0.09
HDAC7-226ENST00000547259 BCORQ6W2J9 1755 aa15.59■□□□□ 0.09
HDAC7-226ENST00000547259 CHL1O00533 1208 aa15.59■□□□□ 0.09
HDAC7-226ENST00000547259 NPR1P16066 1061 aa15.59■□□□□ 0.09
HDAC7-226ENST00000547259 SLFN5Q08AF3 891 aa15.59■□□□□ 0.09
HDAC7-226ENST00000547259 TSR2Q969E8 191 aaKnown RBP15.59■□□□□ 0.09
HDAC7-226ENST00000547259 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
HDAC7-226ENST00000547259 USP16Q9Y5T5 823 aa15.59■□□□□ 0.09
HDAC7-226ENST00000547259 SLX4Q8IY92 1834 aa15.59■□□□□ 0.09
HDAC7-226ENST00000547259 CACNA1SQ13698 1873 aa15.59■□□□□ 0.09
HDAC7-226ENST00000547259 COL11A2P13942 1736 aaPredicted RBP15.58■□□□□ 0.08
HDAC7-226ENST00000547259 CCDC93Q567U6 631 aa15.58■□□□□ 0.08
HDAC7-226ENST00000547259 CHADLQ6NUI6 762 aa15.58■□□□□ 0.08
HDAC7-226ENST00000547259 SCN4AP35499 1836 aa15.57■□□□□ 0.08
HDAC7-226ENST00000547259 POTECB2RU33 542 aa15.57■□□□□ 0.08
HDAC7-226ENST00000547259 ALDH1B1P30837 517 aa15.57■□□□□ 0.08
HDAC7-226ENST00000547259 RTKN2Q8IZC4 609 aa15.57■□□□□ 0.08
HDAC7-226ENST00000547259 CCDC24Q8N4L8 307 aa15.57■□□□□ 0.08
HDAC7-226ENST00000547259 KLRG2A4D1S0 409 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-226ENST00000547259 KCNQ3O43525 872 aa15.56■□□□□ 0.08
HDAC7-226ENST00000547259 GTF2E1P29083 439 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-226ENST00000547259 CREBZFQ9NS37 354 aa15.56■□□□□ 0.08
HDAC7-226ENST00000547259 NIP7Q9Y221 180 aaKnown RBP eCLIP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms