RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 MYD88Q99836 296 aa12.7□□□□□ -0.38
CIT-218ENST00000546026 LRRFIP2Q9Y608 721 aaKnown RBP12.7□□□□□ -0.38
CIT-218ENST00000546026 GRM8O00222 908 aa12.69□□□□□ -0.38
CIT-218ENST00000546026 NBPF7P0C2Y1 421 aaPredicted RBP12.69□□□□□ -0.38
CIT-218ENST00000546026 ATP6V1AP38606 617 aa12.69□□□□□ -0.38
CIT-218ENST00000546026 IL6STP40189 918 aaPredicted RBP12.69□□□□□ -0.38
CIT-218ENST00000546026 GCKRQ14397 625 aa12.69□□□□□ -0.38
CIT-218ENST00000546026 CWF19L2Q2TBE0 894 aaKnown RBP12.69□□□□□ -0.38
CIT-218ENST00000546026 TTLL7Q6ZT98 887 aa12.69□□□□□ -0.38
CIT-218ENST00000546026 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
CIT-218ENST00000546026 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
CIT-218ENST00000546026 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
CIT-218ENST00000546026 RGS3P49796 1198 aa12.68□□□□□ -0.38
CIT-218ENST00000546026 RBM6P78332 1123 aaKnown RBP12.68□□□□□ -0.38
CIT-218ENST00000546026 MTX1Q13505 466 aa12.68□□□□□ -0.38
CIT-218ENST00000546026 KIF6Q6ZMV9 814 aa12.68□□□□□ -0.38
CIT-218ENST00000546026 CHD1LQ86WJ1 897 aa12.68□□□□□ -0.38
CIT-218ENST00000546026 FBXO41Q8TF61 875 aa12.68□□□□□ -0.38
CIT-218ENST00000546026 CCDC87Q9NVE4 849 aa12.68□□□□□ -0.38
CIT-218ENST00000546026 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
CIT-218ENST00000546026 POLA2Q14181 598 aa12.67□□□□□ -0.38
CIT-218ENST00000546026 ANKRD45Q5TZF3 282 aa12.67□□□□□ -0.38
CIT-218ENST00000546026 SKAP1Q86WV1 359 aa12.67□□□□□ -0.38
CIT-218ENST00000546026 SSH3Q8TE77 659 aa12.67□□□□□ -0.38
CIT-218ENST00000546026 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
CIT-218ENST00000546026 COL15A1P39059 1388 aa12.67□□□□□ -0.38
CIT-218ENST00000546026 RREB1Q92766 1687 aa12.67□□□□□ -0.38
CIT-218ENST00000546026 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
CIT-218ENST00000546026 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
CIT-218ENST00000546026 EIF5P55010 431 aaKnown RBP12.66□□□□□ -0.38
CIT-218ENST00000546026 TCIRG1Q13488 830 aa12.66□□□□□ -0.38
CIT-218ENST00000546026 ITPK1Q13572 414 aa12.66□□□□□ -0.38
CIT-218ENST00000546026 HSP90AB3PQ58FF7 597 aa12.66□□□□□ -0.38
CIT-218ENST00000546026 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
CIT-218ENST00000546026 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
CIT-218ENST00000546026 CCDC191Q8NCU4 936 aa12.66□□□□□ -0.38
CIT-218ENST00000546026 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
CIT-218ENST00000546026 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
CIT-218ENST00000546026 ZBTB1Q9Y2K1 713 aa12.66□□□□□ -0.38
CIT-218ENST00000546026 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
CIT-218ENST00000546026 H7C1W4 665 aa12.65□□□□□ -0.38
CIT-218ENST00000546026 PDE4AP27815 886 aa12.65□□□□□ -0.38
CIT-218ENST00000546026 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
CIT-218ENST00000546026 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
CIT-218ENST00000546026 FAM196AQ6ZSG2 479 aa12.65□□□□□ -0.38
CIT-218ENST00000546026 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
CIT-218ENST00000546026 PPP1R42Q7Z4L9 355 aa12.65□□□□□ -0.38
CIT-218ENST00000546026 BCL11BQ9C0K0 894 aaPredicted RBP12.65□□□□□ -0.38
CIT-218ENST00000546026 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
CIT-218ENST00000546026 CWC25Q9NXE8 425 aaPredicted RBP12.65□□□□□ -0.38
CIT-218ENST00000546026 BTAF1O14981 1849 aa12.65□□□□□ -0.39
CIT-218ENST00000546026 SBF2Q86WG5 1849 aa12.65□□□□□ -0.39
CIT-218ENST00000546026 ATP5J2-PTCD1G3V325 749 aa12.64□□□□□ -0.39
CIT-218ENST00000546026 RAB11FIP3O75154 756 aa12.64□□□□□ -0.39
CIT-218ENST00000546026 HSP90AB4PQ58FF6 505 aa12.64□□□□□ -0.39
CIT-218ENST00000546026 RC3H1Q5TC82 1133 aaKnown RBP12.64□□□□□ -0.39
CIT-218ENST00000546026 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
CIT-218ENST00000546026 LNPKQ9C0E8 428 aa12.64□□□□□ -0.39
CIT-218ENST00000546026 AFDNP55196 1824 aaKnown RBP12.64□□□□□ -0.39
CIT-218ENST00000546026 COL5A3P25940 1745 aaPredicted RBP12.63□□□□□ -0.39
CIT-218ENST00000546026 A0A087WZG4 1122 aa12.63□□□□□ -0.39
CIT-218ENST00000546026 CASP7P55210 303 aa12.63□□□□□ -0.39
CIT-218ENST00000546026 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
CIT-218ENST00000546026 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
CIT-218ENST00000546026 KAZALD1Q96I82 304 aa12.63□□□□□ -0.39
CIT-218ENST00000546026 ZNF330Q9Y3S2 320 aaPredicted RBP12.63□□□□□ -0.39
CIT-218ENST00000546026 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
CIT-218ENST00000546026 RGL2O15211 777 aa12.62□□□□□ -0.39
CIT-218ENST00000546026 SRGAP3O43295 1099 aa12.62□□□□□ -0.39
CIT-218ENST00000546026 HMGB2P26583 209 aaKnown RBP12.62□□□□□ -0.39
CIT-218ENST00000546026 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
CIT-218ENST00000546026 PTF1AQ7RTS3 328 aa12.62□□□□□ -0.39
CIT-218ENST00000546026 BACH2Q9BYV9 841 aa12.62□□□□□ -0.39
CIT-218ENST00000546026 NOP58Q9Y2X3 529 aaKnown RBP12.62□□□□□ -0.39
CIT-218ENST00000546026 BRWD3Q6RI45 1802 aa12.61□□□□□ -0.39
CIT-218ENST00000546026 RXRBP28702 533 aa12.61□□□□□ -0.39
CIT-218ENST00000546026 RABL6Q3YEC7 729 aaPredicted RBP12.61□□□□□ -0.39
CIT-218ENST00000546026 LINC00116Q8NCU8 138 aa12.61□□□□□ -0.39
CIT-218ENST00000546026 ARXQ96QS3 562 aa12.61□□□□□ -0.39
CIT-218ENST00000546026 LRRCC1Q9C099 1032 aa12.61□□□□□ -0.39
CIT-218ENST00000546026 BICC1Q9H694 974 aaKnown RBP12.61□□□□□ -0.39
CIT-218ENST00000546026 LY75O60449 1722 aa12.6□□□□□ -0.39
CIT-218ENST00000546026 SURF6O75683 361 aaKnown RBP12.6□□□□□ -0.39
CIT-218ENST00000546026 PCCAP05165 728 aaPredicted RBP12.6□□□□□ -0.39
CIT-218ENST00000546026 HLFQ16534 295 aa12.6□□□□□ -0.39
CIT-218ENST00000546026 UBE3BQ7Z3V4 1068 aa12.6□□□□□ -0.39
CIT-218ENST00000546026 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
CIT-218ENST00000546026 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
CIT-218ENST00000546026 RPS6KA4O75676 772 aa12.59□□□□□ -0.39
CIT-218ENST00000546026 ERC1Q8IUD2 1116 aa12.59□□□□□ -0.39
CIT-218ENST00000546026 ZNF34Q8IZ26 560 aa12.59□□□□□ -0.39
CIT-218ENST00000546026 KIF1BPQ96EK5 621 aa12.59□□□□□ -0.39
CIT-218ENST00000546026 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
CIT-218ENST00000546026 EXOC6BQ9Y2D4 811 aa12.59□□□□□ -0.39
CIT-218ENST00000546026 NUP98P52948 1817 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 CAMTA2O94983 1202 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 FOXO4P98177 505 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 C8orf34Q49A92 452 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 EPHA10Q5JZY3 1008 aa12.58□□□□□ -0.4
CIT-218ENST00000546026 CLEC4GQ6UXB4 293 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms