RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	ZNF219	Q9P2Y4	722 aa	Predicted RBP	31.61	■■■□□ 2.65
RAP1B-233	ENST00000545720	ST5	P78524	1137 aa		31.59	■■■□□ 2.65
RAP1B-233	ENST00000545720	C21orf2	O43822	256 aa		31.58	■■■□□ 2.65
RAP1B-233	ENST00000545720	NEFM	P07197	916 aa		31.58	■■■□□ 2.65
RAP1B-233	ENST00000545720	TAF7	Q15545	349 aa	Predicted RBP	31.57	■■■□□ 2.64
RAP1B-233	ENST00000545720	MIS18A	Q9NYP9	233 aa		31.57	■■■□□ 2.64
RAP1B-233	ENST00000545720	NBPF26	B4DH59	902 aa		31.56	■■■□□ 2.64
RAP1B-233	ENST00000545720	FSTL1	Q12841	308 aa		31.56	■■■□□ 2.64
RAP1B-233	ENST00000545720	NBPF10	Q6P3W6	841 aa	Known RBP	31.56	■■■□□ 2.64
RAP1B-233	ENST00000545720	NBPF15	Q8N660	670 aa		31.56	■■■□□ 2.64
RAP1B-233	ENST00000545720	ZNF652	Q9Y2D9	606 aa		31.56	■■■□□ 2.64
RAP1B-233	ENST00000545720	GLTPD2	A6NH11	291 aa		31.55	■■■□□ 2.64
RAP1B-233	ENST00000545720	CLEC4G	Q6UXB4	293 aa		31.55	■■■□□ 2.64
RAP1B-233	ENST00000545720	NBPF5P	Q86XG9	351 aa	Predicted RBP	31.55	■■■□□ 2.64
RAP1B-233	ENST00000545720	NUP98	P52948	1817 aa		31.54	■■■□□ 2.64
RAP1B-233	ENST00000545720	CNKSR1	Q969H4	720 aa		31.53	■■■□□ 2.64
RAP1B-233	ENST00000545720	SRGN	P10124	158 aa		31.52	■■■□□ 2.64
RAP1B-233	ENST00000545720	STYK1	Q6J9G0	422 aa		31.52	■■■□□ 2.64
RAP1B-233	ENST00000545720	PRPF40B	Q6NWY9	871 aa	Known RBP	31.51	■■■□□ 2.63
RAP1B-233	ENST00000545720	DNAJC5G	Q8N7S2	189 aa		31.51	■■■□□ 2.63
RAP1B-233	ENST00000545720	PLEKHF1	Q96S99	279 aa		31.51	■■■□□ 2.63
RAP1B-233	ENST00000545720	HTRA3	P83110	453 aa		31.5	■■■□□ 2.63
RAP1B-233	ENST00000545720	MASTL	Q96GX5	879 aa		31.5	■■■□□ 2.63
RAP1B-233	ENST00000545720	VEGFA	P15692	232 aa	Predicted RBP	31.49	■■■□□ 2.63
RAP1B-233	ENST00000545720	SMC1B	Q8NDV3	1235 aa		31.49	■■■□□ 2.63
RAP1B-233	ENST00000545720	NIP7	Q9Y221	180 aa	Known RBP eCLIP	31.49	■■■□□ 2.63
RAP1B-233	ENST00000545720	NFE2L2	Q16236	605 aa		31.48	■■■□□ 2.63
RAP1B-233	ENST00000545720	ERFE	Q4G0M1	354 aa		31.48	■■■□□ 2.63
RAP1B-233	ENST00000545720	THUMPD2	Q9BTF0	503 aa	Known RBP	31.48	■■■□□ 2.63
RAP1B-233	ENST00000545720	TAOK3	Q9H2K8	898 aa		31.48	■■■□□ 2.63
RAP1B-233	ENST00000545720	PNISR	Q8TF01	805 aa	Known RBP	31.47	■■■□□ 2.63
RAP1B-233	ENST00000545720	LTBP3	Q9NS15	1303 aa		31.47	■■■□□ 2.63
RAP1B-233	ENST00000545720	FAM177B	A6PVY3	158 aa		31.46	■■■□□ 2.63
RAP1B-233	ENST00000545720	MAPK8IP3	Q9UPT6	1336 aa		31.46	■■■□□ 2.63
RAP1B-233	ENST00000545720	RGL2	O15211	777 aa		31.45	■■■□□ 2.63
RAP1B-233	ENST00000545720	HLF	Q16534	295 aa		31.45	■■■□□ 2.63
RAP1B-233	ENST00000545720	IFFO2	Q5TF58	517 aa		31.44	■■■□□ 2.62
RAP1B-233	ENST00000545720	DPY19L2	Q6NUT2	758 aa		31.44	■■■□□ 2.62
RAP1B-233	ENST00000545720	TPTE2	Q6XPS3	522 aa		31.44	■■■□□ 2.62
RAP1B-233	ENST00000545720	NGEF	Q8N5V2	710 aa		31.44	■■■□□ 2.62
RAP1B-233	ENST00000545720	SOGA3	Q5TF21	947 aa		31.43	■■■□□ 2.62
RAP1B-233	ENST00000545720	EIF4A1	P60842	406 aa	Known RBP	31.42	■■■□□ 2.62
RAP1B-233	ENST00000545720	NPR1	P16066	1061 aa		31.41	■■■□□ 2.62
RAP1B-233	ENST00000545720	PNN	Q9H307	717 aa	Known RBP	31.41	■■■□□ 2.62
RAP1B-233	ENST00000545720	POTEC	B2RU33	542 aa		31.39	■■■□□ 2.62
RAP1B-233	ENST00000545720	KLRG1	Q96E93	195 aa		31.39	■■■□□ 2.62
RAP1B-233	ENST00000545720	RRP7A	Q9Y3A4	280 aa	Known RBP	31.39	■■■□□ 2.62
RAP1B-233	ENST00000545720	KLRG2	A4D1S0	409 aa	Predicted RBP	31.38	■■■□□ 2.61
RAP1B-233	ENST00000545720	GTF2E1	P29083	439 aa	Predicted RBP	31.37	■■■□□ 2.61
RAP1B-233	ENST00000545720	CCDC93	Q567U6	631 aa		31.37	■■■□□ 2.61
RAP1B-233	ENST00000545720	C7orf43	Q8WVR3	580 aa		31.37	■■■□□ 2.61
RAP1B-233	ENST00000545720	MAP3K15	Q6ZN16	1313 aa		31.36	■■■□□ 2.61
RAP1B-233	ENST00000545720	MYL6B	P14649	208 aa		31.36	■■■□□ 2.61
RAP1B-233	ENST00000545720	KIF6	Q6ZMV9	814 aa		31.36	■■■□□ 2.61
RAP1B-233	ENST00000545720	ABCC12	Q96J65	1359 aa		31.35	■■■□□ 2.61
RAP1B-233	ENST00000545720	ERVV-1	B6SEH8	477 aa		31.35	■■■□□ 2.61
RAP1B-233	ENST00000545720	TTLL7	Q6ZT98	887 aa		31.35	■■■□□ 2.61
RAP1B-233	ENST00000545720	SCN4A	P35499	1836 aa		31.34	■■■□□ 2.61
RAP1B-233	ENST00000545720	DDN	O94850	711 aa	Predicted RBP	31.33	■■■□□ 2.61
RAP1B-233	ENST00000545720	OLFM4	Q6UX06	510 aa		31.33	■■■□□ 2.61
RAP1B-233	ENST00000545720	NUTM1	Q86Y26	1132 aa		31.33	■■■□□ 2.61
RAP1B-233	ENST00000545720	RALBP1	Q15311	655 aa		31.32	■■■□□ 2.6
RAP1B-233	ENST00000545720	NYX	Q9GZU5	481 aa		31.32	■■■□□ 2.6
RAP1B-233	ENST00000545720	ZBTB3	Q9H5J0	574 aa		31.32	■■■□□ 2.6
RAP1B-233	ENST00000545720	TSPYL4	Q9UJ04	414 aa		31.32	■■■□□ 2.6
RAP1B-233	ENST00000545720	GPT	P24298	496 aa		31.3	■■■□□ 2.6
RAP1B-233	ENST00000545720	RIPK4	P57078	832 aa		31.3	■■■□□ 2.6
RAP1B-233	ENST00000545720	FKBP4	Q02790	459 aa	Known RBP eCLIP	31.3	■■■□□ 2.6
RAP1B-233	ENST00000545720	UBN2	Q6ZU65	1347 aa		31.29	■■■□□ 2.6
RAP1B-233	ENST00000545720	PCNT	O95613	3336 aa		31.29	■■■□□ 2.6
RAP1B-233	ENST00000545720	ALDH1B1	P30837	517 aa		31.29	■■■□□ 2.6
RAP1B-233	ENST00000545720	JMY	Q8N9B5	988 aa		31.29	■■■□□ 2.6
RAP1B-233	ENST00000545720	ZNF277	Q9NRM2	450 aa	Predicted RBP	31.29	■■■□□ 2.6
RAP1B-233	ENST00000545720	ANKRD36C	Q5JPF3	1778 aa		31.29	■■■□□ 2.6
RAP1B-233	ENST00000545720	ERBB4	Q15303	1308 aa		31.27	■■■□□ 2.6
RAP1B-233	ENST00000545720	RTKN2	Q8IZC4	609 aa		31.27	■■■□□ 2.6
RAP1B-233	ENST00000545720	IBTK	Q9P2D0	1353 aa	Predicted RBP	31.27	■■■□□ 2.6
RAP1B-233	ENST00000545720	CRY2	Q49AN0	593 aa		31.26	■■■□□ 2.59
RAP1B-233	ENST00000545720	TMPO	P42166	694 aa	Known RBP	31.25	■■■□□ 2.59
RAP1B-233	ENST00000545720	RIC1	Q4ADV7	1423 aa		31.24	■■■□□ 2.59
RAP1B-233	ENST00000545720	POTEI	P0CG38	1075 aa		31.24	■■■□□ 2.59
RAP1B-233	ENST00000545720	POTEJ	P0CG39	1038 aa		31.24	■■■□□ 2.59
RAP1B-233	ENST00000545720	EIF2S2	P20042	333 aa	Known RBP	31.24	■■■□□ 2.59
RAP1B-233	ENST00000545720	DDX10	Q13206	875 aa	Known RBP	31.24	■■■□□ 2.59
RAP1B-233	ENST00000545720	SUSD4	Q5VX71	490 aa		31.24	■■■□□ 2.59
RAP1B-233	ENST00000545720	ZNF541	Q9H0D2	1346 aa		31.24	■■■□□ 2.59
RAP1B-233	ENST00000545720	LMOD3	Q0VAK6	560 aa		31.23	■■■□□ 2.59
RAP1B-233	ENST00000545720	RPGR	Q92834	1020 aa	Known RBP	31.23	■■■□□ 2.59
RAP1B-233	ENST00000545720	CHADL	Q6NUI6	762 aa		31.22	■■■□□ 2.59
RAP1B-233	ENST00000545720	GIGYF2	Q6Y7W6	1299 aa	Known RBP	31.22	■■■□□ 2.59
RAP1B-233	ENST00000545720	ZNF34	Q8IZ26	560 aa		31.22	■■■□□ 2.59
RAP1B-233	ENST00000545720	LAMB2	P55268	1798 aa		31.22	■■■□□ 2.59
RAP1B-233	ENST00000545720	SNED1	Q8TER0	1413 aa		31.22	■■■□□ 2.59
RAP1B-233	ENST00000545720	MYBBP1A	Q9BQG0	1328 aa	Known RBP	31.22	■■■□□ 2.59
RAP1B-233	ENST00000545720	IQCA1L	A6NCM1	817 aa		31.21	■■■□□ 2.59
RAP1B-233	ENST00000545720	CCDC146	Q8IYE0	955 aa		31.21	■■■□□ 2.59
RAP1B-233	ENST00000545720	SYNE4	Q8N205	404 aa		31.21	■■■□□ 2.59
RAP1B-233	ENST00000545720	L3MBTL3	Q96JM7	780 aa	Predicted RBP	31.21	■■■□□ 2.59
RAP1B-233	ENST00000545720	NTSR2	O95665	410 aa		31.2	■■■□□ 2.59
RAP1B-233	ENST00000545720	ANXA1	P04083	346 aa		31.2	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms