RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 PPLO60437 1756 aa15.17■□□□□ 0.02
PDZD4-209ENST00000544474 ARHGAP31Q2M1Z3 1444 aa15.17■□□□□ 0.02
PDZD4-209ENST00000544474 LOC102724159A0A0B4J2E5 919 aa15.17■□□□□ 0.02
PDZD4-209ENST00000544474 PWP2Q15269 919 aaKnown RBP15.17■□□□□ 0.02
PDZD4-209ENST00000544474 NGDNQ8NEJ9 315 aaKnown RBP15.17■□□□□ 0.02
PDZD4-209ENST00000544474 AK2P54819 239 aa15.17■□□□□ 0.02
PDZD4-209ENST00000544474 UVSSAQ2YD98 709 aa15.17■□□□□ 0.02
PDZD4-209ENST00000544474 HSP90AA4PQ58FG1 418 aa15.17■□□□□ 0.02
PDZD4-209ENST00000544474 ZNF215Q9UL58 517 aaPredicted RBP15.17■□□□□ 0.02
PDZD4-209ENST00000544474 USP16Q9Y5T5 823 aa15.17■□□□□ 0.02
PDZD4-209ENST00000544474 HNRNPH2P55795 449 aaKnown RBP15.16■□□□□ 0.02
PDZD4-209ENST00000544474 FAM184AQ8NB25 1140 aa15.16■□□□□ 0.02
PDZD4-209ENST00000544474 MSH6P52701 1360 aa15.16■□□□□ 0.02
PDZD4-209ENST00000544474 LIG1P18858 919 aa15.16■□□□□ 0.02
PDZD4-209ENST00000544474 GUCY1B3Q02153 619 aa15.16■□□□□ 0.02
PDZD4-209ENST00000544474 NUP62CLQ9H1M0 184 aa15.16■□□□□ 0.02
PDZD4-209ENST00000544474 RIMS2Q9UQ26 1411 aa15.16■□□□□ 0.02
PDZD4-209ENST00000544474 ZRSR1Q15695 479 aaKnown RBP15.15■□□□□ 0.02
PDZD4-209ENST00000544474 AXDND1Q5T1B0 1012 aaPredicted RBP15.15■□□□□ 0.02
PDZD4-209ENST00000544474 KIAA1524Q8TCG1 905 aa15.15■□□□□ 0.02
PDZD4-209ENST00000544474 STK31Q9BXU1 1019 aa15.15■□□□□ 0.02
PDZD4-209ENST00000544474 LRRCC1Q9C099 1032 aa15.15■□□□□ 0.02
PDZD4-209ENST00000544474 ZSWIM4Q9H7M6 989 aa15.15■□□□□ 0.02
PDZD4-209ENST00000544474 BCCIPQ9P287 314 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDZD4-209ENST00000544474 ZC3H13Q5T200 1668 aaKnown RBP15.15■□□□□ 0.02
PDZD4-209ENST00000544474 SYCP1Q15431 976 aa15.15■□□□□ 0.02
PDZD4-209ENST00000544474 LARGE1O95461 756 aa15.15■□□□□ 0.02
PDZD4-209ENST00000544474 ANXA1P04083 346 aa15.15■□□□□ 0.02
PDZD4-209ENST00000544474 ZSCAN22P10073 491 aaPredicted RBP15.15■□□□□ 0.02
PDZD4-209ENST00000544474 PNMA6EA0A0J9YXQ4 647 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 GNAI2P04899 355 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 TSPYL4Q9UJ04 414 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 RTL1A6NKG5 1358 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 USP27XA6NNY8 438 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 PSEN1P49768 467 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 CEP135Q66GS9 1140 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 PTPRCP08575 1304 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 ZNF165P49910 485 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 RAD51AP2Q09MP3 1159 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 LRRC2Q9BYS8 371 aa15.14■□□□□ 0.01
PDZD4-209ENST00000544474 LRRFIP2Q9Y608 721 aaKnown RBP15.14■□□□□ 0.01
PDZD4-209ENST00000544474 KIDINS220Q9ULH0 1771 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 ABCA9Q8IUA7 1624 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 UBE2HP62256 183 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 MAP3K11Q16584 847 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 NEK11Q8NG66 645 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 RASSF4Q9H2L5 321 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 BIN1O00499 593 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 PTPN14Q15678 1187 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 CAMSAP1Q5T5Y3 1602 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 TPM3P06753 285 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 FAM193AP78312 1265 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 CNPY4Q8N129 248 aa15.13■□□□□ 0.01
PDZD4-209ENST00000544474 ARHGEF28Q8N1W1 1705 aaKnown RBP15.13■□□□□ 0.01
PDZD4-209ENST00000544474 NOL10Q9BSC4 688 aaKnown RBP15.13■□□□□ 0.01
PDZD4-209ENST00000544474 CCT4P50991 539 aaKnown RBP15.12■□□□□ 0.01
PDZD4-209ENST00000544474 CREBRFQ8IUR6 639 aa15.12■□□□□ 0.01
PDZD4-209ENST00000544474 TOMM22Q9NS69 142 aa15.12■□□□□ 0.01
PDZD4-209ENST00000544474 TYRO3Q06418 890 aa15.12■□□□□ 0.01
PDZD4-209ENST00000544474 CCDC34Q96HJ3 373 aa15.12■□□□□ 0.01
PDZD4-209ENST00000544474 EPC1Q9H2F5 836 aa15.12■□□□□ 0.01
PDZD4-209ENST00000544474 ANKRD65E5RJM6 399 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 H3BQV1 296 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 SMC2O95347 1197 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 CHMLP26374 656 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 AMPHP49418 695 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 GYS2P54840 703 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 IFFO2Q5TF58 517 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 ZNF622Q969S3 477 aaKnown RBP eCLIP15.11■□□□□ 0.01
PDZD4-209ENST00000544474 F13A1P00488 732 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 SPATA32Q96LK8 384 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 ABCC3O15438 1527 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 SMTNL1A8MU46 457 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 ERCC6LQ2NKX8 1250 aa15.11■□□□□ 0.01
PDZD4-209ENST00000544474 SKILP12757 684 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 TTLL5Q6EMB2 1281 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 C10orf67Q8IYJ2 551 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 CACTINQ8WUQ7 758 aaKnown RBP15.1■□□□□ 0.01
PDZD4-209ENST00000544474 SIL1Q9H173 461 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 KCNG1Q9UIX4 513 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 ATP6V1DQ9Y5K8 247 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 CD163L1Q9NR16 1453 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 CHL1O00533 1208 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 ZNF397Q8NF99 534 aaPredicted RBP15.1■□□□□ 0.01
PDZD4-209ENST00000544474 INTS4Q96HW7 963 aaKnown RBP15.1■□□□□ 0.01
PDZD4-209ENST00000544474 CBX8Q9HC52 389 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 ZCCHC17Q9NP64 241 aaKnown RBP15.1■□□□□ 0.01
PDZD4-209ENST00000544474 PDRG1Q9NUG6 133 aa15.1■□□□□ 0.01
PDZD4-209ENST00000544474 WASLO00401 505 aaPredicted RBP15.09■□□□□ 0.01
PDZD4-209ENST00000544474 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.09■□□□□ 0.01
PDZD4-209ENST00000544474 NEXMIFQ5QGS0 1516 aa15.09■□□□□ 0.01
PDZD4-209ENST00000544474 GNAI3P08754 354 aa15.09■□□□□ 0.01
PDZD4-209ENST00000544474 CTR9Q6PD62 1173 aa15.09■□□□□ 0.01
PDZD4-209ENST00000544474 MYCBPQ99417 103 aaPredicted RBP15.09■□□□□ 0.01
PDZD4-209ENST00000544474 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
PDZD4-209ENST00000544474 REREQ9P2R6 1566 aa15.09■□□□□ 0.01
PDZD4-209ENST00000544474 ATP10DQ9P241 1426 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms