RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 MARCH10Q8NA82 808 aaPredicted RBP16.96■□□□□ 0.31
HCFC2-202ENST00000544223 SIL1Q9H173 461 aa16.96■□□□□ 0.31
HCFC2-202ENST00000544223 MAP4K4O95819 1239 aaPredicted RBP16.96■□□□□ 0.3
HCFC2-202ENST00000544223 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.3
HCFC2-202ENST00000544223 SSH3Q8TE77 659 aa16.96■□□□□ 0.3
HCFC2-202ENST00000544223 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.3
HCFC2-202ENST00000544223 KCNQ2O43526 872 aa16.95■□□□□ 0.3
HCFC2-202ENST00000544223 KCNQ4P56696 695 aa16.95■□□□□ 0.3
HCFC2-202ENST00000544223 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
HCFC2-202ENST00000544223 METTL22Q9BUU2 404 aaPredicted RBP16.95■□□□□ 0.3
HCFC2-202ENST00000544223 UBR2Q8IWV8 1755 aa16.95■□□□□ 0.3
HCFC2-202ENST00000544223 GCKRQ14397 625 aa16.95■□□□□ 0.3
HCFC2-202ENST00000544223 TTC22Q5TAA0 569 aa16.95■□□□□ 0.3
HCFC2-202ENST00000544223 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
HCFC2-202ENST00000544223 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
HCFC2-202ENST00000544223 IBTKQ9P2D0 1353 aaPredicted RBP16.94■□□□□ 0.3
HCFC2-202ENST00000544223 SDSP20132 328 aa16.94■□□□□ 0.3
HCFC2-202ENST00000544223 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
HCFC2-202ENST00000544223 POLA2Q14181 598 aa16.93■□□□□ 0.3
HCFC2-202ENST00000544223 ALDH1L1O75891 902 aa16.93■□□□□ 0.3
HCFC2-202ENST00000544223 PDE1AP54750 535 aa16.93■□□□□ 0.3
HCFC2-202ENST00000544223 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
HCFC2-202ENST00000544223 SPATA31A5Q5VU36 1347 aa16.92■□□□□ 0.3
HCFC2-202ENST00000544223 SPATA31A7Q8IWB4 1347 aa16.92■□□□□ 0.3
HCFC2-202ENST00000544223 OS9Q13438 667 aaPredicted RBP16.92■□□□□ 0.3
HCFC2-202ENST00000544223 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
HCFC2-202ENST00000544223 PAPPAQ13219 1627 aa16.92■□□□□ 0.3
HCFC2-202ENST00000544223 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
HCFC2-202ENST00000544223 A0A087WZG4 1122 aa16.92■□□□□ 0.3
HCFC2-202ENST00000544223 UNC5CLQ8IV45 518 aa16.92■□□□□ 0.3
HCFC2-202ENST00000544223 AFDNP55196 1824 aaKnown RBP16.92■□□□□ 0.3
HCFC2-202ENST00000544223 TNS2Q63HR2 1409 aa16.91■□□□□ 0.3
HCFC2-202ENST00000544223 SPRYD3Q8NCJ5 442 aa16.91■□□□□ 0.3
HCFC2-202ENST00000544223 C22orf23Q9BZE7 217 aa16.91■□□□□ 0.3
HCFC2-202ENST00000544223 BCL9O00512 1426 aa16.91■□□□□ 0.3
HCFC2-202ENST00000544223 LAMB4A4D0S4 1761 aa16.91■□□□□ 0.3
HCFC2-202ENST00000544223 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
HCFC2-202ENST00000544223 RHPN1Q8TCX5 695 aa16.91■□□□□ 0.3
HCFC2-202ENST00000544223 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
HCFC2-202ENST00000544223 PLEKHG2Q9H7P9 1386 aa16.9■□□□□ 0.3
HCFC2-202ENST00000544223 HSPA1LP34931 641 aa16.9■□□□□ 0.3
HCFC2-202ENST00000544223 SYNE4Q8N205 404 aa16.9■□□□□ 0.3
HCFC2-202ENST00000544223 PLBD2Q8NHP8 589 aa16.9■□□□□ 0.3
HCFC2-202ENST00000544223 CCDC85AQ96PX6 553 aaPredicted RBP16.9■□□□□ 0.3
HCFC2-202ENST00000544223 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
HCFC2-202ENST00000544223 MX1P20591 662 aa16.9■□□□□ 0.3
HCFC2-202ENST00000544223 NBR1Q14596 966 aa16.89■□□□□ 0.29
HCFC2-202ENST00000544223 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
HCFC2-202ENST00000544223 SLIT2O94813 1529 aa16.89■□□□□ 0.29
HCFC2-202ENST00000544223 LRP6O75581 1613 aa16.89■□□□□ 0.29
HCFC2-202ENST00000544223 RILPL2Q969X0 211 aa16.89■□□□□ 0.29
HCFC2-202ENST00000544223 CHMP3Q9Y3E7 222 aa16.89■□□□□ 0.29
HCFC2-202ENST00000544223 BCL9LQ86UU0 1499 aa16.88■□□□□ 0.29
HCFC2-202ENST00000544223 GPTP24298 496 aa16.88■□□□□ 0.29
HCFC2-202ENST00000544223 HLFQ16534 295 aa16.88■□□□□ 0.29
HCFC2-202ENST00000544223 WNK3Q9BYP7 1800 aa16.88■□□□□ 0.29
HCFC2-202ENST00000544223 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.88■□□□□ 0.29
HCFC2-202ENST00000544223 TRIM6-TRIM34B2RNG4 842 aa16.88■□□□□ 0.29
HCFC2-202ENST00000544223 CERKQ8TCT0 537 aa16.88■□□□□ 0.29
HCFC2-202ENST00000544223 SALL3Q9BXA9 1300 aa16.88■□□□□ 0.29
HCFC2-202ENST00000544223 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
HCFC2-202ENST00000544223 UTYO14607 1347 aa16.86■□□□□ 0.29
HCFC2-202ENST00000544223 CDC45O75419 566 aa16.86■□□□□ 0.29
HCFC2-202ENST00000544223 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
HCFC2-202ENST00000544223 TLR7Q9NYK1 1049 aaKnown RBP16.86■□□□□ 0.29
HCFC2-202ENST00000544223 USP21Q9UK80 565 aa16.86■□□□□ 0.29
HCFC2-202ENST00000544223 SASH1O94885 1247 aa16.85■□□□□ 0.29
HCFC2-202ENST00000544223 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
HCFC2-202ENST00000544223 JCADQ9P266 1359 aa16.85■□□□□ 0.29
HCFC2-202ENST00000544223 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
HCFC2-202ENST00000544223 FAM177BA6PVY3 158 aa16.84■□□□□ 0.29
HCFC2-202ENST00000544223 MTX1Q13505 466 aa16.84■□□□□ 0.29
HCFC2-202ENST00000544223 LMBR1LQ6UX01 489 aa16.84■□□□□ 0.29
HCFC2-202ENST00000544223 DDRGK1Q96HY6 314 aa16.84■□□□□ 0.29
HCFC2-202ENST00000544223 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
HCFC2-202ENST00000544223 STARD3NLO95772 234 aa16.84■□□□□ 0.29
HCFC2-202ENST00000544223 ATP6V1AP38606 617 aa16.84■□□□□ 0.29
HCFC2-202ENST00000544223 KIF1BPQ96EK5 621 aa16.84■□□□□ 0.29
HCFC2-202ENST00000544223 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
HCFC2-202ENST00000544223 IL25Q9H293 177 aa16.84■□□□□ 0.29
HCFC2-202ENST00000544223 CASP7P55210 303 aa16.83■□□□□ 0.28
HCFC2-202ENST00000544223 MEX3CQ5U5Q3 659 aaKnown RBP16.83■□□□□ 0.28
HCFC2-202ENST00000544223 ANP32EQ9BTT0 268 aa16.83■□□□□ 0.28
HCFC2-202ENST00000544223 THRAP3Q9Y2W1 955 aaKnown RBP16.83■□□□□ 0.28
HCFC2-202ENST00000544223 ITPK1Q13572 414 aa16.83■□□□□ 0.28
HCFC2-202ENST00000544223 NUP188Q5SRE5 1749 aa16.83■□□□□ 0.28
HCFC2-202ENST00000544223 NDUFB9Q9Y6M9 179 aa16.83■□□□□ 0.28
HCFC2-202ENST00000544223 AACSQ86V21 672 aa16.82■□□□□ 0.28
HCFC2-202ENST00000544223 SLKQ9H2G2 1235 aaPredicted RBP16.82■□□□□ 0.28
HCFC2-202ENST00000544223 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
HCFC2-202ENST00000544223 EAF2Q96CJ1 260 aaPredicted RBP16.81■□□□□ 0.28
HCFC2-202ENST00000544223 TBC1D2Q9BYX2 928 aa16.81■□□□□ 0.28
HCFC2-202ENST00000544223 FOXO4P98177 505 aa16.81■□□□□ 0.28
HCFC2-202ENST00000544223 PI4K2BQ8TCG2 481 aa16.81■□□□□ 0.28
HCFC2-202ENST00000544223 OSBPL3Q9H4L5 887 aa16.81■□□□□ 0.28
HCFC2-202ENST00000544223 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
HCFC2-202ENST00000544223 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
HCFC2-202ENST00000544223 KIF2CQ99661 725 aa16.8■□□□□ 0.28
HCFC2-202ENST00000544223 CD2BP2O95400 341 aaKnown RBP16.8■□□□□ 0.28
HCFC2-202ENST00000544223 PTPN12Q05209 780 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms