RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 RTKN2Q8IZC4 609 aa12.01□□□□□ -0.49
UBC-211ENST00000542416 CNTNAP1P78357 1384 aa12.01□□□□□ -0.49
UBC-211ENST00000542416 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
UBC-211ENST00000542416 PER1O15534 1290 aaPredicted RBP12□□□□□ -0.49
UBC-211ENST00000542416 CTCFP49711 727 aaPredicted RBP12□□□□□ -0.49
UBC-211ENST00000542416 CC2D1BQ5T0F9 858 aaKnown RBP12□□□□□ -0.49
UBC-211ENST00000542416 PNMA8AQ86V59 439 aaPredicted RBP12□□□□□ -0.49
UBC-211ENST00000542416 CCDC24Q8N4L8 307 aa12□□□□□ -0.49
UBC-211ENST00000542416 TAF1DQ9H5J8 278 aaPredicted RBP12□□□□□ -0.49
UBC-211ENST00000542416 PASKQ96RG2 1323 aa12□□□□□ -0.49
UBC-211ENST00000542416 KLRG2A4D1S0 409 aaPredicted RBP11.99□□□□□ -0.49
UBC-211ENST00000542416 SNRPA1P09661 255 aaKnown RBP11.99□□□□□ -0.49
UBC-211ENST00000542416 ALDH1B1P30837 517 aa11.99□□□□□ -0.49
UBC-211ENST00000542416 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
UBC-211ENST00000542416 C7orf43Q8WVR3 580 aa11.99□□□□□ -0.49
UBC-211ENST00000542416 HACL1Q9UJ83 578 aa11.99□□□□□ -0.49
UBC-211ENST00000542416 KIF7Q2M1P5 1343 aa11.99□□□□□ -0.49
UBC-211ENST00000542416 CEMIPQ8WUJ3 1361 aa11.99□□□□□ -0.49
UBC-211ENST00000542416 NPC1L1Q9UHC9 1359 aa11.99□□□□□ -0.49
UBC-211ENST00000542416 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
UBC-211ENST00000542416 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
UBC-211ENST00000542416 RTF1Q92541 710 aaKnown RBP11.98□□□□□ -0.49
UBC-211ENST00000542416 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
UBC-211ENST00000542416 NUDCQ9Y266 331 aa11.98□□□□□ -0.49
UBC-211ENST00000542416 AFDNP55196 1824 aaKnown RBP11.97□□□□□ -0.49
UBC-211ENST00000542416 FOXN1O15353 648 aa11.97□□□□□ -0.49
UBC-211ENST00000542416 EAPPQ56P03 285 aaPredicted RBP11.97□□□□□ -0.49
UBC-211ENST00000542416 CLEC11AQ9Y240 323 aa11.97□□□□□ -0.49
UBC-211ENST00000542416 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
UBC-211ENST00000542416 DLEC1Q9Y238 1755 aa11.97□□□□□ -0.49
UBC-211ENST00000542416 ITGBL1O95965 494 aaPredicted RBP11.96□□□□□ -0.49
UBC-211ENST00000542416 GTF2E1P29083 439 aaPredicted RBP11.96□□□□□ -0.49
UBC-211ENST00000542416 EPHX2P34913 555 aa11.96□□□□□ -0.49
UBC-211ENST00000542416 VEGFBP49765 207 aa11.96□□□□□ -0.49
UBC-211ENST00000542416 MAP2K1Q02750 393 aaPredicted RBP11.96□□□□□ -0.49
UBC-211ENST00000542416 GRIPAP1Q4V328 841 aa11.96□□□□□ -0.49
UBC-211ENST00000542416 CC2D2BQ6DHV5 1058 aa11.96□□□□□ -0.49
UBC-211ENST00000542416 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.49
UBC-211ENST00000542416 JDP2Q8WYK2 163 aa11.96□□□□□ -0.49
UBC-211ENST00000542416 WBP1LQ9NX94 342 aa11.96□□□□□ -0.49
UBC-211ENST00000542416 NIP7Q9Y221 180 aaKnown RBP eCLIP11.96□□□□□ -0.49
UBC-211ENST00000542416 FZD9O00144 591 aa11.95□□□□□ -0.5
UBC-211ENST00000542416 PRKAR2BP31323 418 aa11.95□□□□□ -0.5
UBC-211ENST00000542416 DEFB115Q30KQ5 88 aa11.95□□□□□ -0.5
UBC-211ENST00000542416 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
UBC-211ENST00000542416 GPC2Q8N158 579 aa11.95□□□□□ -0.5
UBC-211ENST00000542416 ZNF277Q9NRM2 450 aaPredicted RBP11.95□□□□□ -0.5
UBC-211ENST00000542416 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
UBC-211ENST00000542416 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
UBC-211ENST00000542416 KCNQ3O43525 872 aa11.94□□□□□ -0.5
UBC-211ENST00000542416 HTATSF1O43719 755 aaKnown RBP11.94□□□□□ -0.5
UBC-211ENST00000542416 IARSP41252 1262 aaKnown RBP11.94□□□□□ -0.5
UBC-211ENST00000542416 PSMD1Q99460 953 aa11.94□□□□□ -0.5
UBC-211ENST00000542416 NYXQ9GZU5 481 aa11.94□□□□□ -0.5
UBC-211ENST00000542416 UBR2Q8IWV8 1755 aa11.93□□□□□ -0.5
UBC-211ENST00000542416 LMOD1P29536 600 aaPredicted RBP11.93□□□□□ -0.5
UBC-211ENST00000542416 EIF6P56537 245 aaKnown RBP11.93□□□□□ -0.5
UBC-211ENST00000542416 SYNE4Q8N205 404 aa11.93□□□□□ -0.5
UBC-211ENST00000542416 PHACTR3Q96KR7 559 aa11.93□□□□□ -0.5
UBC-211ENST00000542416 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
UBC-211ENST00000542416 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
UBC-211ENST00000542416 SCN7AQ01118 1682 aa11.92□□□□□ -0.5
UBC-211ENST00000542416 BEGAINQ9BUH8 593 aa11.92□□□□□ -0.5
UBC-211ENST00000542416 ABT1Q9ULW3 272 aaKnown RBP11.92□□□□□ -0.5
UBC-211ENST00000542416 FER1L6Q2WGJ9 1857 aa11.91□□□□□ -0.5
UBC-211ENST00000542416 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
UBC-211ENST00000542416 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
UBC-211ENST00000542416 ERVV-1B6SEH8 477 aa11.91□□□□□ -0.5
UBC-211ENST00000542416 U2AF1L5P0DN76 240 aaPredicted RBP11.91□□□□□ -0.5
UBC-211ENST00000542416 ECE1P42892 770 aa11.91□□□□□ -0.5
UBC-211ENST00000542416 PIP4K2AP48426 406 aaPredicted RBP11.91□□□□□ -0.5
UBC-211ENST00000542416 LBX1P52954 281 aa11.91□□□□□ -0.5
UBC-211ENST00000542416 U2AF1Q01081 240 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBC-211ENST00000542416 TAF7Q15545 349 aaPredicted RBP11.91□□□□□ -0.5
UBC-211ENST00000542416 CRY2Q49AN0 593 aa11.91□□□□□ -0.5
UBC-211ENST00000542416 TMX4Q9H1E5 349 aaPredicted RBP11.91□□□□□ -0.5
UBC-211ENST00000542416 WDR33Q9C0J8 1336 aaKnown RBP11.9□□□□□ -0.5
UBC-211ENST00000542416 FAM177BA6PVY3 158 aa11.9□□□□□ -0.5
UBC-211ENST00000542416 NBPF26B4DH59 902 aa11.9□□□□□ -0.5
UBC-211ENST00000542416 NEFMP07197 916 aa11.9□□□□□ -0.5
UBC-211ENST00000542416 MAP1SQ66K74 1059 aaPredicted RBP11.9□□□□□ -0.5
UBC-211ENST00000542416 NBPF10Q6P3W6 841 aaKnown RBP11.9□□□□□ -0.5
UBC-211ENST00000542416 MCM10Q7L590 875 aa11.9□□□□□ -0.5
UBC-211ENST00000542416 NBPF15Q8N660 670 aa11.9□□□□□ -0.5
UBC-211ENST00000542416 PNISRQ8TF01 805 aaKnown RBP11.9□□□□□ -0.5
UBC-211ENST00000542416 RPGRQ92834 1020 aaKnown RBP11.9□□□□□ -0.5
UBC-211ENST00000542416 DDX21Q9NR30 783 aaKnown RBP eCLIP11.9□□□□□ -0.5
UBC-211ENST00000542416 ANKRD31Q8N7Z5 1873 aa11.89□□□□□ -0.51
UBC-211ENST00000542416 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
UBC-211ENST00000542416 HOXA10P31260 410 aaPredicted RBP11.89□□□□□ -0.51
UBC-211ENST00000542416 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
UBC-211ENST00000542416 USP50Q70EL3 339 aaPredicted RBP11.89□□□□□ -0.51
UBC-211ENST00000542416 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
UBC-211ENST00000542416 DICER1Q9UPY3 1922 aaKnown RBP11.89□□□□□ -0.51
UBC-211ENST00000542416 SCN4AP35499 1836 aa11.88□□□□□ -0.51
UBC-211ENST00000542416 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
UBC-211ENST00000542416 HSPA8P11142 646 aaKnown RBP11.88□□□□□ -0.51
UBC-211ENST00000542416 HLFQ16534 295 aa11.88□□□□□ -0.51
UBC-211ENST00000542416 OLFM4Q6UX06 510 aa11.88□□□□□ -0.51
UBC-211ENST00000542416 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms