RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 CWF19L2Q2TBE0 894 aaKnown RBP21■□□□□ 0.95
SPIDR-227ENST00000541342 ESPNB1AK53 854 aa20.99■□□□□ 0.95
SPIDR-227ENST00000541342 SSH3Q8TE77 659 aa20.99■□□□□ 0.95
SPIDR-227ENST00000541342 IBTKQ9P2D0 1353 aaPredicted RBP20.99■□□□□ 0.95
SPIDR-227ENST00000541342 DISP2A7MBM2 1401 aa20.99■□□□□ 0.95
SPIDR-227ENST00000541342 ALDH1L1O75891 902 aa20.99■□□□□ 0.95
SPIDR-227ENST00000541342 RABEP1Q15276 862 aa20.99■□□□□ 0.95
SPIDR-227ENST00000541342 PPP1R42Q7Z4L9 355 aa20.99■□□□□ 0.95
SPIDR-227ENST00000541342 XAGE3Q8WTP9 111 aa20.99■□□□□ 0.95
SPIDR-227ENST00000541342 CYP2E1P05181 493 aaPredicted RBP20.98■□□□□ 0.95
SPIDR-227ENST00000541342 PTMSP20962 102 aa20.98■□□□□ 0.95
SPIDR-227ENST00000541342 PLCH1Q4KWH8 1693 aa20.98■□□□□ 0.95
SPIDR-227ENST00000541342 DDX58O95786 925 aaKnown RBP20.98■□□□□ 0.95
SPIDR-227ENST00000541342 PKP1Q13835 747 aa20.98■□□□□ 0.95
SPIDR-227ENST00000541342 POLA2Q14181 598 aa20.98■□□□□ 0.95
SPIDR-227ENST00000541342 COPS6Q7L5N1 327 aa20.98■□□□□ 0.95
SPIDR-227ENST00000541342 SDSP20132 328 aa20.97■□□□□ 0.95
SPIDR-227ENST00000541342 KLHL40Q2TBA0 621 aa20.96■□□□□ 0.95
SPIDR-227ENST00000541342 WNK3Q9BYP7 1800 aa20.96■□□□□ 0.95
SPIDR-227ENST00000541342 LINS1Q8NG48 757 aa20.96■□□□□ 0.95
SPIDR-227ENST00000541342 UBE2Q2Q8WVN8 375 aa20.96■□□□□ 0.95
SPIDR-227ENST00000541342 IGKV5-2P06315 115 aa20.96■□□□□ 0.95
SPIDR-227ENST00000541342 LRRCC1Q9C099 1032 aa20.96■□□□□ 0.95
SPIDR-227ENST00000541342 TNS2Q63HR2 1409 aa20.95■□□□□ 0.94
SPIDR-227ENST00000541342 RIC3Q7Z5B4 369 aa20.95■□□□□ 0.94
SPIDR-227ENST00000541342 NAP1L5Q96NT1 182 aaPredicted RBP20.95■□□□□ 0.94
SPIDR-227ENST00000541342 ARFGEF2Q9Y6D5 1785 aa20.95■□□□□ 0.94
SPIDR-227ENST00000541342 SRGAP3O43295 1099 aa20.94■□□□□ 0.94
SPIDR-227ENST00000541342 C9orf78Q9NZ63 289 aaPredicted RBP20.94■□□□□ 0.94
SPIDR-227ENST00000541342 SALL3Q9BXA9 1300 aa20.94■□□□□ 0.94
SPIDR-227ENST00000541342 ITGB4P16144 1822 aa20.94■□□□□ 0.94
SPIDR-227ENST00000541342 TUBGCP6Q96RT7 1819 aa20.94■□□□□ 0.94
SPIDR-227ENST00000541342 NRAPQ86VF7 1730 aa20.93■□□□□ 0.94
SPIDR-227ENST00000541342 UTYO14607 1347 aa20.93■□□□□ 0.94
SPIDR-227ENST00000541342 NBPF26B4DH59 902 aa20.93■□□□□ 0.94
SPIDR-227ENST00000541342 NBPF14Q5TI25 921 aa20.93■□□□□ 0.94
SPIDR-227ENST00000541342 NBPF10Q6P3W6 841 aaKnown RBP20.93■□□□□ 0.94
SPIDR-227ENST00000541342 NBPF15Q8N660 670 aa20.93■□□□□ 0.94
SPIDR-227ENST00000541342 DDX49Q9Y6V7 483 aaKnown RBP20.93■□□□□ 0.94
SPIDR-227ENST00000541342 PDE1AP54750 535 aa20.92■□□□□ 0.94
SPIDR-227ENST00000541342 OSBPL3Q9H4L5 887 aa20.92■□□□□ 0.94
SPIDR-227ENST00000541342 GRM8O00222 908 aa20.92■□□□□ 0.94
SPIDR-227ENST00000541342 PTCD1O75127 700 aaKnown RBP20.92■□□□□ 0.94
SPIDR-227ENST00000541342 ADAMTS2O95450 1211 aa20.92■□□□□ 0.94
SPIDR-227ENST00000541342 ANKRD13DQ6ZTN6 518 aa20.92■□□□□ 0.94
SPIDR-227ENST00000541342 AFDNP55196 1824 aaKnown RBP20.91■□□□□ 0.94
SPIDR-227ENST00000541342 KAZALD1Q96I82 304 aa20.91■□□□□ 0.94
SPIDR-227ENST00000541342 METTL22Q9BUU2 404 aaPredicted RBP20.91■□□□□ 0.94
SPIDR-227ENST00000541342 PIP4K2BP78356 416 aa20.91■□□□□ 0.94
SPIDR-227ENST00000541342 MTX1Q13505 466 aa20.91■□□□□ 0.94
SPIDR-227ENST00000541342 NEURL1BA8MQ27 555 aa20.91■□□□□ 0.94
SPIDR-227ENST00000541342 ZGPATQ8N5A5 531 aaKnown RBP20.91■□□□□ 0.94
SPIDR-227ENST00000541342 MYD88Q99836 296 aa20.91■□□□□ 0.94
SPIDR-227ENST00000541342 LMBRD1Q9NUN5 540 aa20.91■□□□□ 0.94
SPIDR-227ENST00000541342 GOLGA6L22H0YM25 854 aa20.9■□□□□ 0.94
SPIDR-227ENST00000541342 SURF6O75683 361 aaKnown RBP20.9■□□□□ 0.94
SPIDR-227ENST00000541342 TSHZ3Q63HK5 1081 aa20.9■□□□□ 0.94
SPIDR-227ENST00000541342 PPP1R9BQ96SB3 815 aa20.9■□□□□ 0.94
SPIDR-227ENST00000541342 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
SPIDR-227ENST00000541342 MCTP1Q6DN14 999 aa20.9■□□□□ 0.94
SPIDR-227ENST00000541342 SUCLG2Q96I99 432 aa20.9■□□□□ 0.94
SPIDR-227ENST00000541342 ZDHHC9Q9Y397 364 aa20.89■□□□□ 0.94
SPIDR-227ENST00000541342 NASPP49321 788 aaPredicted RBP20.89■□□□□ 0.93
SPIDR-227ENST00000541342 PIGBQ92521 554 aa20.89■□□□□ 0.93
SPIDR-227ENST00000541342 TRIM44Q96DX7 344 aaPredicted RBP20.89■□□□□ 0.93
SPIDR-227ENST00000541342 IL1RAPL2Q9NP60 686 aa20.88■□□□□ 0.93
SPIDR-227ENST00000541342 NUP188Q5SRE5 1749 aa20.88■□□□□ 0.93
SPIDR-227ENST00000541342 A1BGP04217 495 aa20.88■□□□□ 0.93
SPIDR-227ENST00000541342 NUCB2P80303 420 aa20.88■□□□□ 0.93
SPIDR-227ENST00000541342 NEXNQ0ZGT2 675 aa20.88■□□□□ 0.93
SPIDR-227ENST00000541342 RAB11FIP3O75154 756 aa20.88■□□□□ 0.93
SPIDR-227ENST00000541342 GCKRQ14397 625 aa20.88■□□□□ 0.93
SPIDR-227ENST00000541342 ASAP1Q9ULH1 1129 aa20.87■□□□□ 0.93
SPIDR-227ENST00000541342 MX1P20591 662 aa20.87■□□□□ 0.93
SPIDR-227ENST00000541342 ZNF445P59923 1031 aa20.87■□□□□ 0.93
SPIDR-227ENST00000541342 BICC1Q9H694 974 aaKnown RBP20.87■□□□□ 0.93
SPIDR-227ENST00000541342 TOM1O60784 492 aa20.86■□□□□ 0.93
SPIDR-227ENST00000541342 CCDC173Q0VFZ6 552 aa20.86■□□□□ 0.93
SPIDR-227ENST00000541342 RHPN1Q8TCX5 695 aa20.86■□□□□ 0.93
SPIDR-227ENST00000541342 LRP6O75581 1613 aa20.86■□□□□ 0.93
SPIDR-227ENST00000541342 NUTM2BA6NNL0 878 aaPredicted RBP20.85■□□□□ 0.93
SPIDR-227ENST00000541342 NUTM2EB1AL46 878 aaPredicted RBP20.85■□□□□ 0.93
SPIDR-227ENST00000541342 ZSCAN23Q3MJ62 389 aa20.85■□□□□ 0.93
SPIDR-227ENST00000541342 NUTM2AQ8IVF1 878 aaPredicted RBP20.85■□□□□ 0.93
SPIDR-227ENST00000541342 PLBD2Q8NHP8 589 aa20.85■□□□□ 0.93
SPIDR-227ENST00000541342 CHAMP1Q96JM3 812 aa20.85■□□□□ 0.93
SPIDR-227ENST00000541342 CAVIN1Q6NZI2 390 aaKnown RBP20.85■□□□□ 0.93
SPIDR-227ENST00000541342 ATG3Q9NT62 314 aa20.85■□□□□ 0.93
SPIDR-227ENST00000541342 STAP2Q9UGK3 403 aa20.85■□□□□ 0.93
SPIDR-227ENST00000541342 TTLL7Q6ZT98 887 aa20.84■□□□□ 0.93
SPIDR-227ENST00000541342 SPATA31A1Q5TZJ5 1347 aa20.84■□□□□ 0.93
SPIDR-227ENST00000541342 EXOC5O00471 708 aa20.84■□□□□ 0.93
SPIDR-227ENST00000541342 GPT2Q8TD30 523 aa20.84■□□□□ 0.93
SPIDR-227ENST00000541342 PA2G4Q9UQ80 394 aaKnown RBP20.84■□□□□ 0.93
SPIDR-227ENST00000541342 HDAC5Q9UQL6 1122 aa20.84■□□□□ 0.93
SPIDR-227ENST00000541342 KAT6BQ8WYB5 2073 aa20.83■□□□□ 0.93
SPIDR-227ENST00000541342 ATP5J2-PTCD1G3V325 749 aa20.83■□□□□ 0.93
SPIDR-227ENST00000541342 KIF1BPQ96EK5 621 aa20.83■□□□□ 0.93
SPIDR-227ENST00000541342 CWC22Q9HCG8 908 aaKnown RBP20.83■□□□□ 0.93
SPIDR-227ENST00000541342 NUTM1Q86Y26 1132 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms