RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 PDCL3Q9H2J4 239 aa17.57■□□□□ 0.4
SFSWAP-210ENST00000541286 SLC4A10Q6U841 1118 aa17.57■□□□□ 0.4
SFSWAP-210ENST00000541286 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
SFSWAP-210ENST00000541286 RXRBP28702 533 aa17.56■□□□□ 0.4
SFSWAP-210ENST00000541286 NKX1-1Q15270 411 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-210ENST00000541286 JARID2Q92833 1246 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-210ENST00000541286 SMARCA5O60264 1052 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-210ENST00000541286 SIRT2Q8IXJ6 389 aa17.55■□□□□ 0.4
SFSWAP-210ENST00000541286 KRT27Q7Z3Y8 459 aa17.54■□□□□ 0.4
SFSWAP-210ENST00000541286 MSNP26038 577 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 RBM6P78332 1123 aaKnown RBP17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 BMP2KLQ5H9B9 411 aa17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 DOT1LQ8TEK3 1739 aa17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 DDX11L8A8MPP1 907 aa17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 FOXD4L5Q5VV16 416 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 FOXD4L4Q8WXT5 416 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 BRWD3Q6RI45 1802 aa17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 ERVV-2B6SEH9 535 aa17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 TPRNQ4KMQ1 711 aa17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 AMIGO3Q86WK7 504 aa17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 GCC1Q96CN9 775 aa17.53■□□□□ 0.4
SFSWAP-210ENST00000541286 ITGB4P16144 1822 aa17.52■□□□□ 0.4
SFSWAP-210ENST00000541286 NASPP49321 788 aaPredicted RBP17.52■□□□□ 0.4
SFSWAP-210ENST00000541286 GBP4Q96PP9 640 aa17.52■□□□□ 0.4
SFSWAP-210ENST00000541286 NBPF26B4DH59 902 aa17.51■□□□□ 0.39
SFSWAP-210ENST00000541286 SSFA2P28290 1259 aa17.51■□□□□ 0.39
SFSWAP-210ENST00000541286 ITPK1Q13572 414 aa17.51■□□□□ 0.39
SFSWAP-210ENST00000541286 NBPF14Q5TI25 921 aa17.51■□□□□ 0.39
SFSWAP-210ENST00000541286 NBPF10Q6P3W6 841 aaKnown RBP17.51■□□□□ 0.39
SFSWAP-210ENST00000541286 NBPF15Q8N660 670 aa17.51■□□□□ 0.39
SFSWAP-210ENST00000541286 FKBP5Q13451 457 aaPredicted RBP17.51■□□□□ 0.39
SFSWAP-210ENST00000541286 BCL9O00512 1426 aa17.5■□□□□ 0.39
SFSWAP-210ENST00000541286 RBM25P49756 843 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-210ENST00000541286 FMNL2Q96PY5 1086 aa17.5■□□□□ 0.39
SFSWAP-210ENST00000541286 TPM2P07951 284 aa17.5■□□□□ 0.39
SFSWAP-210ENST00000541286 ATP6V1AP38606 617 aa17.5■□□□□ 0.39
SFSWAP-210ENST00000541286 PDIA6Q15084 440 aa17.5■□□□□ 0.39
SFSWAP-210ENST00000541286 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
SFSWAP-210ENST00000541286 WNK3Q9BYP7 1800 aa17.5■□□□□ 0.39
SFSWAP-210ENST00000541286 CHAMP1Q96JM3 812 aa17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 API5Q9BZZ5 524 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 CDCA7Q9BWT1 371 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 RGS12O14924 1447 aa17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 K7ELQ4 463 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 ONECUT3O60422 494 aaPredicted RBP17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 CDC45O75419 566 aa17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 TTLL7Q6ZT98 887 aa17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 NOL8Q76FK4 1167 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
SFSWAP-210ENST00000541286 TSC1Q92574 1164 aa17.48■□□□□ 0.39
SFSWAP-210ENST00000541286 ANP32BQ92688 251 aaKnown RBP17.48■□□□□ 0.39
SFSWAP-210ENST00000541286 PRDM4Q9UKN5 801 aa17.48■□□□□ 0.39
SFSWAP-210ENST00000541286 C5P01031 1676 aa17.48■□□□□ 0.39
SFSWAP-210ENST00000541286 FLIIQ13045 1269 aa17.48■□□□□ 0.39
SFSWAP-210ENST00000541286 SIPA1L3O60292 1781 aaPredicted RBP17.48■□□□□ 0.39
SFSWAP-210ENST00000541286 STK31Q9BXU1 1019 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 ZBTB3Q9H5J0 574 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 ZBTB1Q9Y2K1 713 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 GSPT1P15170 499 aaKnown RBP17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 SIK1P57059 783 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 TSHZ3Q63HK5 1081 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 COPS6Q7L5N1 327 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 PI4KAP1Q8N8J0 262 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 XAGE3Q8WTP9 111 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 KIF2CQ99661 725 aa17.47■□□□□ 0.39
SFSWAP-210ENST00000541286 LRRC4BQ9NT99 713 aa17.46■□□□□ 0.39
SFSWAP-210ENST00000541286 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.39
SFSWAP-210ENST00000541286 KDM3BQ7LBC6 1761 aa17.46■□□□□ 0.39
SFSWAP-210ENST00000541286 PALLDQ8WX93 1383 aa17.46■□□□□ 0.39
SFSWAP-210ENST00000541286 FAM177BA6PVY3 158 aa17.46■□□□□ 0.39
SFSWAP-210ENST00000541286 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
SFSWAP-210ENST00000541286 HEG1Q9ULI3 1381 aa17.46■□□□□ 0.39
SFSWAP-210ENST00000541286 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 UQCRHLA0A096LP55 91 aa17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 GOLGA6L22H0YM25 854 aa17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 UQCRHP07919 91 aa17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 PHF14O94880 888 aa17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 ZSCAN30Q86W11 494 aa17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 PLEKHM2Q8IWE5 1019 aa17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 MEIS3Q99687 375 aa17.45■□□□□ 0.38
SFSWAP-210ENST00000541286 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
SFSWAP-210ENST00000541286 THSD7AQ9UPZ6 1657 aa17.44■□□□□ 0.38
SFSWAP-210ENST00000541286 CAVIN1Q6NZI2 390 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-210ENST00000541286 SNX21Q969T3 373 aa17.44■□□□□ 0.38
SFSWAP-210ENST00000541286 ADAMTS7Q9UKP4 1686 aa17.44■□□□□ 0.38
SFSWAP-210ENST00000541286 KCPQ6ZWJ8 1503 aa17.44■□□□□ 0.38
SFSWAP-210ENST00000541286 FOXD4L6Q3SYB3 417 aaPredicted RBP17.43■□□□□ 0.38
SFSWAP-210ENST00000541286 FOXD4L3Q6VB84 417 aaPredicted RBP17.43■□□□□ 0.38
SFSWAP-210ENST00000541286 LINC00116Q8NCU8 138 aa17.43■□□□□ 0.38
SFSWAP-210ENST00000541286 ARHGAP45Q92619 1136 aa17.43■□□□□ 0.38
SFSWAP-210ENST00000541286 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-210ENST00000541286 RAB3GAP1Q15042 981 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms