RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 ANAPC4Q9UJX5 808 aa10.72□□□□□ -0.69
TCF4-207ENST00000540999 L1TD1Q5T7N2 865 aaKnown RBP10.71□□□□□ -0.69
TCF4-207ENST00000540999 KIAA1211Q6ZU35 1233 aa10.71□□□□□ -0.69
TCF4-207ENST00000540999 ALS2Q96Q42 1657 aa10.71□□□□□ -0.7
TCF4-207ENST00000540999 ARHGEF10O15013 1369 aa10.71□□□□□ -0.7
TCF4-207ENST00000540999 MED1Q15648 1581 aaPredicted RBP10.71□□□□□ -0.7
TCF4-207ENST00000540999 PAX3P23760 479 aa10.71□□□□□ -0.7
TCF4-207ENST00000540999 ZFYVE27Q5T4F4 411 aa10.71□□□□□ -0.7
TCF4-207ENST00000540999 ARHGEF25Q86VW2 580 aa10.71□□□□□ -0.7
TCF4-207ENST00000540999 KCNH5Q8NCM2 988 aa10.71□□□□□ -0.7
TCF4-207ENST00000540999 ELL2O00472 640 aaPredicted RBP10.7□□□□□ -0.7
TCF4-207ENST00000540999 RGPD5Q99666 1765 aa10.7□□□□□ -0.7
TCF4-207ENST00000540999 KDRP35968 1356 aa10.7□□□□□ -0.7
TCF4-207ENST00000540999 USP19O94966 1318 aa10.7□□□□□ -0.7
TCF4-207ENST00000540999 NEXNQ0ZGT2 675 aa10.7□□□□□ -0.7
TCF4-207ENST00000540999 SF3A1Q15459 793 aaKnown RBP10.7□□□□□ -0.7
TCF4-207ENST00000540999 ACRBPQ8NEB7 543 aa10.7□□□□□ -0.7
TCF4-207ENST00000540999 HELBQ8NG08 1087 aaPredicted RBP10.7□□□□□ -0.7
TCF4-207ENST00000540999 NPHP3Q7Z494 1330 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 HDGFL1Q5TGJ6 251 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 MAMSTRQ6ZN01 415 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 TSPYL6Q8N831 410 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 PANK1Q8TE04 598 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 MBIPQ9NS73 344 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 SLIT3O75094 1523 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 PXDNQ92626 1479 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 IL16Q14005 1332 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 MAP4K4O95819 1239 aaPredicted RBP10.69□□□□□ -0.7
TCF4-207ENST00000540999 PAX7P23759 505 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 FOSBP53539 338 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 DONSONQ9NYP3 566 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 MIS18AQ9NYP9 233 aa10.69□□□□□ -0.7
TCF4-207ENST00000540999 NFKBIBQ15653 356 aa10.68□□□□□ -0.7
TCF4-207ENST00000540999 CHRNA2Q15822 529 aa10.68□□□□□ -0.7
TCF4-207ENST00000540999 KIF24Q5T7B8 1368 aa10.68□□□□□ -0.7
TCF4-207ENST00000540999 KRT24Q2M2I5 525 aa10.68□□□□□ -0.7
TCF4-207ENST00000540999 PUS10Q3MIT2 529 aaKnown RBP10.68□□□□□ -0.7
TCF4-207ENST00000540999 CLUAP1Q96AJ1 413 aa10.68□□□□□ -0.7
TCF4-207ENST00000540999 RLBP1P12271 317 aa10.67□□□□□ -0.7
TCF4-207ENST00000540999 SSH1Q8WYL5 1049 aa10.67□□□□□ -0.7
TCF4-207ENST00000540999 CEP126Q9P2H0 1117 aa10.67□□□□□ -0.7
TCF4-207ENST00000540999 RTL1A6NKG5 1358 aa10.67□□□□□ -0.7
TCF4-207ENST00000540999 SPATA31A3Q5VYP0 1347 aa10.67□□□□□ -0.7
TCF4-207ENST00000540999 ANKRD62A6NC57 917 aa10.67□□□□□ -0.7
TCF4-207ENST00000540999 WDR78Q5VTH9 848 aa10.67□□□□□ -0.7
TCF4-207ENST00000540999 SPRYD3Q8NCJ5 442 aa10.67□□□□□ -0.7
TCF4-207ENST00000540999 ANKRD24Q8TF21 1146 aa10.67□□□□□ -0.7
TCF4-207ENST00000540999 TNS3Q68CZ2 1445 aa10.66□□□□□ -0.7
TCF4-207ENST00000540999 KIF1CO43896 1103 aaKnown RBP10.66□□□□□ -0.7
TCF4-207ENST00000540999 C8orf58Q8NAV2 365 aa10.66□□□□□ -0.7
TCF4-207ENST00000540999 SUDS3Q9H7L9 328 aaPredicted RBP10.66□□□□□ -0.7
TCF4-207ENST00000540999 ZC3H4Q9UPT8 1303 aaKnown RBP10.66□□□□□ -0.7
TCF4-207ENST00000540999 KLHL33A6NCF5 533 aa10.66□□□□□ -0.7
TCF4-207ENST00000540999 ZRANB2O95218 330 aaKnown RBP eCLIP10.66□□□□□ -0.7
TCF4-207ENST00000540999 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.66□□□□□ -0.7
TCF4-207ENST00000540999 IFT57Q9NWB7 429 aa10.66□□□□□ -0.7
TCF4-207ENST00000540999 COG6Q9Y2V7 657 aa10.66□□□□□ -0.7
TCF4-207ENST00000540999 GTF2A1P52655 376 aaPredicted RBP10.65□□□□□ -0.7
TCF4-207ENST00000540999 GNAI1P63096 354 aa10.65□□□□□ -0.7
TCF4-207ENST00000540999 BIRC2Q13490 618 aa10.65□□□□□ -0.7
TCF4-207ENST00000540999 RPAINQ86UA6 219 aa10.65□□□□□ -0.7
TCF4-207ENST00000540999 SKAP1Q86WV1 359 aa10.65□□□□□ -0.7
TCF4-207ENST00000540999 CACTIN-AS1Q8N1I8 211 aa10.65□□□□□ -0.7
TCF4-207ENST00000540999 TULP2O00295 520 aa10.65□□□□□ -0.71
TCF4-207ENST00000540999 CTAGE5O15320 804 aa10.65□□□□□ -0.71
TCF4-207ENST00000540999 NAT1P18440 290 aa10.65□□□□□ -0.71
TCF4-207ENST00000540999 MFSD4BQ5TF39 518 aa10.65□□□□□ -0.71
TCF4-207ENST00000540999 PHRF1Q9P1Y6 1649 aaKnown RBP10.64□□□□□ -0.71
TCF4-207ENST00000540999 IPO7O95373 1038 aaKnown RBP10.64□□□□□ -0.71
TCF4-207ENST00000540999 RBM5P52756 815 aaKnown RBP eCLIP10.64□□□□□ -0.71
TCF4-207ENST00000540999 ZNF662Q6ZS27 426 aa10.64□□□□□ -0.71
TCF4-207ENST00000540999 FBXW7Q969H0 707 aa10.64□□□□□ -0.71
TCF4-207ENST00000540999 VAMP4O75379 141 aa10.64□□□□□ -0.71
TCF4-207ENST00000540999 KIAA0232Q92628 1395 aa10.63□□□□□ -0.71
TCF4-207ENST00000540999 EXOC5O00471 708 aa10.63□□□□□ -0.71
TCF4-207ENST00000540999 RAB11FIP3O75154 756 aa10.63□□□□□ -0.71
TCF4-207ENST00000540999 CLEC4GQ6UXB4 293 aa10.63□□□□□ -0.71
TCF4-207ENST00000540999 IL17REQ8NFR9 667 aa10.63□□□□□ -0.71
TCF4-207ENST00000540999 ARHGEF10LQ9HCE6 1279 aa10.63□□□□□ -0.71
TCF4-207ENST00000540999 SOS2Q07890 1332 aaPredicted RBP10.63□□□□□ -0.71
TCF4-207ENST00000540999 CRB1P82279 1406 aa10.63□□□□□ -0.71
TCF4-207ENST00000540999 PES1O00541 588 aaKnown RBP10.63□□□□□ -0.71
TCF4-207ENST00000540999 SH3BP5O60239 455 aa10.63□□□□□ -0.71
TCF4-207ENST00000540999 NAP1L1P55209 391 aaKnown RBP10.63□□□□□ -0.71
TCF4-207ENST00000540999 DNAJC21Q5F1R6 531 aaKnown RBP10.63□□□□□ -0.71
TCF4-207ENST00000540999 LRCH2Q5VUJ6 765 aa10.63□□□□□ -0.71
TCF4-207ENST00000540999 RTF1Q92541 710 aaKnown RBP10.63□□□□□ -0.71
TCF4-207ENST00000540999 TMX4Q9H1E5 349 aaPredicted RBP10.63□□□□□ -0.71
TCF4-207ENST00000540999 NOB1Q9ULX3 412 aaKnown RBP10.63□□□□□ -0.71
TCF4-207ENST00000540999 CCDC189A1A4V9 331 aa10.62□□□□□ -0.71
TCF4-207ENST00000540999 SMAPO00193 183 aa10.62□□□□□ -0.71
TCF4-207ENST00000540999 CHL1O00533 1208 aa10.62□□□□□ -0.71
TCF4-207ENST00000540999 GAS2L2Q8NHY3 880 aa10.62□□□□□ -0.71
TCF4-207ENST00000540999 TIGD1Q96MW7 591 aa10.62□□□□□ -0.71
TCF4-207ENST00000540999 CRYBG1Q9Y4K1 1723 aa10.62□□□□□ -0.71
TCF4-207ENST00000540999 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
TCF4-207ENST00000540999 LIG1P18858 919 aa10.62□□□□□ -0.71
TCF4-207ENST00000540999 TWISTNBQ3B726 338 aaPredicted RBP10.62□□□□□ -0.71
TCF4-207ENST00000540999 ARPC5LQ9BPX5 153 aa10.62□□□□□ -0.71
TCF4-207ENST00000540999 UBA5Q9GZZ9 404 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms