RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SLC4A10Q6U841 1118 aa17.95■□□□□ 0.46
CYB561A3-216ENST00000540755 TJP1Q07157 1748 aa17.95■□□□□ 0.46
CYB561A3-216ENST00000540755 ADCY9O60503 1353 aa17.95■□□□□ 0.46
CYB561A3-216ENST00000540755 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
CYB561A3-216ENST00000540755 IGHDP01880 384 aa17.95■□□□□ 0.46
CYB561A3-216ENST00000540755 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
CYB561A3-216ENST00000540755 RWDD1Q9H446 243 aaPredicted RBP17.95■□□□□ 0.46
CYB561A3-216ENST00000540755 HDAC1Q13547 482 aaPredicted RBP17.94■□□□□ 0.46
CYB561A3-216ENST00000540755 LRP10Q7Z4F1 713 aa17.94■□□□□ 0.46
CYB561A3-216ENST00000540755 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
CYB561A3-216ENST00000540755 ARXQ96QS3 562 aa17.94■□□□□ 0.46
CYB561A3-216ENST00000540755 GOLGB1Q14789 3259 aaKnown RBP17.93■□□□□ 0.46
CYB561A3-216ENST00000540755 PI4KAP2A4QPH2 592 aa17.93■□□□□ 0.46
CYB561A3-216ENST00000540755 DDX58O95786 925 aaKnown RBP17.93■□□□□ 0.46
CYB561A3-216ENST00000540755 KSR2Q6VAB6 950 aa17.93■□□□□ 0.46
CYB561A3-216ENST00000540755 PI4KAP1Q8N8J0 262 aa17.93■□□□□ 0.46
CYB561A3-216ENST00000540755 CCNL1Q9UK58 526 aaPredicted RBP17.93■□□□□ 0.46
CYB561A3-216ENST00000540755 TAF1LQ8IZX4 1826 aa17.92■□□□□ 0.46
CYB561A3-216ENST00000540755 ZNF831Q5JPB2 1677 aa17.92■□□□□ 0.46
CYB561A3-216ENST00000540755 ARFGEF2Q9Y6D5 1785 aa17.91■□□□□ 0.46
CYB561A3-216ENST00000540755 MYL6BP14649 208 aa17.91■□□□□ 0.46
CYB561A3-216ENST00000540755 SLC16A10Q8TF71 515 aa17.91■□□□□ 0.46
CYB561A3-216ENST00000540755 TFCP2L1Q9NZI6 479 aa17.91■□□□□ 0.46
CYB561A3-216ENST00000540755 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
CYB561A3-216ENST00000540755 BEND3Q5T5X7 828 aa17.9■□□□□ 0.46
CYB561A3-216ENST00000540755 MEIS3Q99687 375 aa17.9■□□□□ 0.46
CYB561A3-216ENST00000540755 RBM42Q9BTD8 480 aaKnown RBP17.9■□□□□ 0.46
CYB561A3-216ENST00000540755 SRCIN1Q9C0H9 1055 aa17.9■□□□□ 0.46
CYB561A3-216ENST00000540755 IBTKQ9P2D0 1353 aaPredicted RBP17.9■□□□□ 0.46
CYB561A3-216ENST00000540755 DCAF8L1A6NGE4 600 aa17.89■□□□□ 0.45
CYB561A3-216ENST00000540755 NBPF26B4DH59 902 aa17.89■□□□□ 0.45
CYB561A3-216ENST00000540755 NBPF10Q6P3W6 841 aaKnown RBP17.89■□□□□ 0.45
CYB561A3-216ENST00000540755 COPS6Q7L5N1 327 aa17.89■□□□□ 0.45
CYB561A3-216ENST00000540755 NBPF15Q8N660 670 aa17.89■□□□□ 0.45
CYB561A3-216ENST00000540755 XAGE3Q8WTP9 111 aa17.89■□□□□ 0.45
CYB561A3-216ENST00000540755 MAP3K2Q9Y2U5 619 aa17.89■□□□□ 0.45
CYB561A3-216ENST00000540755 STARD3NLO95772 234 aa17.88■□□□□ 0.45
CYB561A3-216ENST00000540755 GNAI3P08754 354 aa17.88■□□□□ 0.45
CYB561A3-216ENST00000540755 DNAJC10Q8IXB1 793 aa17.88■□□□□ 0.45
CYB561A3-216ENST00000540755 C1orf115Q9H7X2 142 aa17.88■□□□□ 0.45
CYB561A3-216ENST00000540755 ALDH1L1O75891 902 aa17.88■□□□□ 0.45
CYB561A3-216ENST00000540755 A1BGP04217 495 aa17.88■□□□□ 0.45
CYB561A3-216ENST00000540755 AIMP1Q12904 312 aaKnown RBP17.88■□□□□ 0.45
CYB561A3-216ENST00000540755 SMARCC1Q92922 1105 aaPredicted RBP17.88■□□□□ 0.45
CYB561A3-216ENST00000540755 SLC4A9Q96Q91 983 aa17.88■□□□□ 0.45
CYB561A3-216ENST00000540755 C4BP0C0L5 1744 aa17.87■□□□□ 0.45
CYB561A3-216ENST00000540755 AFDNP55196 1824 aaKnown RBP17.87■□□□□ 0.45
CYB561A3-216ENST00000540755 COL23A1Q86Y22 540 aaPredicted RBP17.87■□□□□ 0.45
CYB561A3-216ENST00000540755 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
CYB561A3-216ENST00000540755 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
CYB561A3-216ENST00000540755 ANKRD13DQ6ZTN6 518 aa17.86■□□□□ 0.45
CYB561A3-216ENST00000540755 RIC3Q7Z5B4 369 aa17.86■□□□□ 0.45
CYB561A3-216ENST00000540755 LINS1Q8NG48 757 aa17.86■□□□□ 0.45
CYB561A3-216ENST00000540755 USP44Q9H0E7 712 aa17.86■□□□□ 0.45
CYB561A3-216ENST00000540755 COL5A3P25940 1745 aaPredicted RBP17.86■□□□□ 0.45
CYB561A3-216ENST00000540755 GNAI2P04899 355 aa17.85■□□□□ 0.45
CYB561A3-216ENST00000540755 CYP19A1P11511 503 aaPredicted RBP17.85■□□□□ 0.45
CYB561A3-216ENST00000540755 SMC5Q8IY18 1101 aa17.85■□□□□ 0.45
CYB561A3-216ENST00000540755 ANKRD44Q8N8A2 993 aa17.85■□□□□ 0.45
CYB561A3-216ENST00000540755 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
CYB561A3-216ENST00000540755 POLD1P28340 1107 aa17.84■□□□□ 0.45
CYB561A3-216ENST00000540755 CEP85Q6P2H3 762 aa17.84■□□□□ 0.45
CYB561A3-216ENST00000540755 AMIGO3Q86WK7 504 aa17.84■□□□□ 0.45
CYB561A3-216ENST00000540755 SIRT2Q8IXJ6 389 aa17.84■□□□□ 0.45
CYB561A3-216ENST00000540755 METTL22Q9BUU2 404 aaPredicted RBP17.84■□□□□ 0.45
CYB561A3-216ENST00000540755 CHD4Q14839 1912 aa17.84■□□□□ 0.45
CYB561A3-216ENST00000540755 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
CYB561A3-216ENST00000540755 LOC102724428A0A0B4J2F2 783 aa17.83■□□□□ 0.45
CYB561A3-216ENST00000540755 SIK1P57059 783 aa17.83■□□□□ 0.45
CYB561A3-216ENST00000540755 NEXNQ0ZGT2 675 aa17.83■□□□□ 0.45
CYB561A3-216ENST00000540755 UBTFL1P0CB47 393 aaPredicted RBP17.82■□□□□ 0.44
CYB561A3-216ENST00000540755 GCC1Q96CN9 775 aa17.82■□□□□ 0.44
CYB561A3-216ENST00000540755 NLGN2Q8NFZ4 835 aa17.82■□□□□ 0.44
CYB561A3-216ENST00000540755 IGKV5-2P06315 115 aa17.81■□□□□ 0.44
CYB561A3-216ENST00000540755 ATP6V1AP38606 617 aa17.81■□□□□ 0.44
CYB561A3-216ENST00000540755 MSL1Q68DK7 614 aa17.81■□□□□ 0.44
CYB561A3-216ENST00000540755 KLHL34Q8N239 644 aa17.81■□□□□ 0.44
CYB561A3-216ENST00000540755 HDAC5Q9UQL6 1122 aa17.81■□□□□ 0.44
CYB561A3-216ENST00000540755 UTYO14607 1347 aa17.8■□□□□ 0.44
CYB561A3-216ENST00000540755 NEURL1BA8MQ27 555 aa17.8■□□□□ 0.44
CYB561A3-216ENST00000540755 HMMRO75330 724 aa17.8■□□□□ 0.44
CYB561A3-216ENST00000540755 CWF19L2Q2TBE0 894 aaKnown RBP17.8■□□□□ 0.44
CYB561A3-216ENST00000540755 TTLL7Q6ZT98 887 aa17.8■□□□□ 0.44
CYB561A3-216ENST00000540755 MYD88Q99836 296 aa17.8■□□□□ 0.44
CYB561A3-216ENST00000540755 PDZRN3Q9UPQ7 1066 aa17.8■□□□□ 0.44
CYB561A3-216ENST00000540755 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
CYB561A3-216ENST00000540755 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
CYB561A3-216ENST00000540755 IL6STP40189 918 aaPredicted RBP17.79■□□□□ 0.44
CYB561A3-216ENST00000540755 ZNF784Q8NCA9 323 aaPredicted RBP17.79■□□□□ 0.44
CYB561A3-216ENST00000540755 ZBTB1Q9Y2K1 713 aa17.79■□□□□ 0.44
CYB561A3-216ENST00000540755 LRRFIP2Q9Y608 721 aaKnown RBP17.79■□□□□ 0.44
CYB561A3-216ENST00000540755 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
CYB561A3-216ENST00000540755 MSH5O43196 834 aa17.78■□□□□ 0.44
CYB561A3-216ENST00000540755 DCTPP1Q9H773 170 aa17.78■□□□□ 0.44
CYB561A3-216ENST00000540755 C9orf78Q9NZ63 289 aaPredicted RBP17.78■□□□□ 0.44
CYB561A3-216ENST00000540755 GRM8O00222 908 aa17.77■□□□□ 0.44
CYB561A3-216ENST00000540755 ATP8B2P98198 1209 aa17.77■□□□□ 0.44
CYB561A3-216ENST00000540755 ITPK1Q13572 414 aa17.77■□□□□ 0.44
CYB561A3-216ENST00000540755 KIF6Q6ZMV9 814 aa17.77■□□□□ 0.44
CYB561A3-216ENST00000540755 SMIM5Q71RC9 77 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms