RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 XAGE3Q8WTP9 111 aa15.08■□□□□ 0
USP10-202ENST00000540269 SASH1O94885 1247 aa15.08■□□□□ 0
USP10-202ENST00000540269 CHMP4AQ9BY43 222 aa15.08■□□□□ 0
USP10-202ENST00000540269 LMTK3Q96Q04 1460 aa15.07■□□□□ 0
USP10-202ENST00000540269 USP42Q9H9J4 1324 aaKnown RBP15.07■□□□□ 0
USP10-202ENST00000540269 RASEFQ8IZ41 740 aa15.07■□□□□ 0
USP10-202ENST00000540269 SPG7Q9UQ90 795 aa15.07■□□□□ 0
USP10-202ENST00000540269 HSPA4P34932 840 aa15.07■□□□□ 0
USP10-202ENST00000540269 NUCB2P80303 420 aa15.07■□□□□ 0
USP10-202ENST00000540269 CWC27Q6UX04 472 aaKnown RBP15.07■□□□□ 0
USP10-202ENST00000540269 COPS6Q7L5N1 327 aa15.07■□□□□ 0
USP10-202ENST00000540269 LSG1Q9H089 658 aaKnown RBP15.07■□□□□ 0
USP10-202ENST00000540269 IL17RAQ96F46 866 aa15.06■□□□□ 0
USP10-202ENST00000540269 LMBRD1Q9NUN5 540 aa15.06■□□□□ 0
USP10-202ENST00000540269 TLR7Q9NYK1 1049 aaKnown RBP15.06■□□□□ 0
USP10-202ENST00000540269 UTYO14607 1347 aa15.06■□□□□ 0
USP10-202ENST00000540269 ANAPC15P60006 121 aa15.06■□□□□ 0
USP10-202ENST00000540269 CWC22Q9HCG8 908 aaKnown RBP15.06■□□□□ 0
USP10-202ENST00000540269 CUL4AQ13619 759 aa15.06■□□□□ 0
USP10-202ENST00000540269 RIC3Q7Z5B4 369 aa15.06■□□□□ 0
USP10-202ENST00000540269 IFNL2Q8IZJ0 200 aa15.06■□□□□ 0
USP10-202ENST00000540269 EAF2Q96CJ1 260 aaPredicted RBP15.06■□□□□ 0
USP10-202ENST00000540269 GRPEL1Q9HAV7 217 aa15.06■□□□□ 0
USP10-202ENST00000540269 TNS3Q68CZ2 1445 aa15.05■□□□□ 0
USP10-202ENST00000540269 MCCP23508 829 aa15.05■□□□□ 0
USP10-202ENST00000540269 LARP6Q9BRS8 491 aaKnown RBP15.05■□□□□ 0
USP10-202ENST00000540269 SIL1Q9H173 461 aa15.05■□□□□ 0
USP10-202ENST00000540269 SPATA31A3Q5VYP0 1347 aa15.05■□□□□ -0
USP10-202ENST00000540269 RAD50Q92878 1312 aa15.05■□□□□ -0
USP10-202ENST00000540269 NEURL1BA8MQ27 555 aa15.05■□□□□ -0
USP10-202ENST00000540269 HSP90AB4PQ58FF6 505 aa15.05■□□□□ -0
USP10-202ENST00000540269 MYD88Q99836 296 aa15.05■□□□□ -0
USP10-202ENST00000540269 AACSQ86V21 672 aa15.04■□□□□ -0
USP10-202ENST00000540269 CNTROBQ8N137 903 aa15.04■□□□□ -0
USP10-202ENST00000540269 CLASRPQ8N2M8 674 aaKnown RBP15.04■□□□□ -0
USP10-202ENST00000540269 CCDC8Q9H0W5 538 aaPredicted RBP15.04■□□□□ -0
USP10-202ENST00000540269 SNX14Q9Y5W7 946 aa15.04■□□□□ -0
USP10-202ENST00000540269 DDX49Q9Y6V7 483 aaKnown RBP15.04■□□□□ -0
USP10-202ENST00000540269 DTNBO60941 627 aa15.04■□□□□ -0
USP10-202ENST00000540269 CPA1P15085 419 aa15.04■□□□□ -0
USP10-202ENST00000540269 PTH1RQ03431 593 aa15.04■□□□□ -0
USP10-202ENST00000540269 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
USP10-202ENST00000540269 TTC41PQ6P2S7 1318 aa15.03■□□□□ -0
USP10-202ENST00000540269 GLRX3O76003 335 aaKnown RBP15.03■□□□□ -0
USP10-202ENST00000540269 DDX58O95786 925 aaKnown RBP15.03■□□□□ -0
USP10-202ENST00000540269 MRE11P49959 708 aa15.03■□□□□ -0
USP10-202ENST00000540269 GCKRQ14397 625 aa15.03■□□□□ -0
USP10-202ENST00000540269 KLHL40Q2TBA0 621 aa15.03■□□□□ -0
USP10-202ENST00000540269 RRAGDQ9NQL2 400 aaPredicted RBP15.03■□□□□ -0
USP10-202ENST00000540269 ECHDC1Q9NTX5 307 aa15.03■□□□□ -0
USP10-202ENST00000540269 DCCP43146 1447 aa15.03■□□□□ -0
USP10-202ENST00000540269 COL9A3Q14050 684 aaPredicted RBP15.03■□□□□ -0
USP10-202ENST00000540269 CADPS2Q86UW7 1296 aa15.03■□□□□ -0
USP10-202ENST00000540269 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.03■□□□□ -05e-7■■□□□ 12.1
USP10-202ENST00000540269 NSFL1CQ9UNZ2 370 aaKnown RBP15.02■□□□□ -0
USP10-202ENST00000540269 GLI3P10071 1580 aa15.02■□□□□ -0
USP10-202ENST00000540269 LARP1Q6PKG0 1096 aaKnown RBP15.02□□□□□ -0.01
USP10-202ENST00000540269 DCAF5Q96JK2 942 aa15.02□□□□□ -0.01
USP10-202ENST00000540269 METTL22Q9BUU2 404 aaPredicted RBP15.02□□□□□ -0.01
USP10-202ENST00000540269 PRPF40AO75400 957 aaKnown RBP15.01□□□□□ -0.01
USP10-202ENST00000540269 IFIT2P09913 472 aaKnown RBP15.01□□□□□ -0.01
USP10-202ENST00000540269 MRC1P22897 1456 aa15.01□□□□□ -0.01
USP10-202ENST00000540269 GPT2Q8TD30 523 aa15.01□□□□□ -0.01
USP10-202ENST00000540269 ATP5J2-PTCD1G3V325 749 aa15.01□□□□□ -0.01
USP10-202ENST00000540269 GOLGA6L22H0YM25 854 aa15.01□□□□□ -0.01
USP10-202ENST00000540269 PTCD1O75127 700 aaKnown RBP15.01□□□□□ -0.01
USP10-202ENST00000540269 BRINP3Q76B58 766 aa15.01□□□□□ -0.01
USP10-202ENST00000540269 BRD1O95696 1058 aa15.01□□□□□ -0.01
USP10-202ENST00000540269 SNRPA1P09661 255 aaKnown RBP15.01□□□□□ -0.01
USP10-202ENST00000540269 DDX54Q8TDD1 881 aaKnown RBP15.01□□□□□ -0.01
USP10-202ENST00000540269 TTC14Q96N46 770 aa15.01□□□□□ -0.01
USP10-202ENST00000540269 RBM27Q9P2N5 1060 aaKnown RBP15.01□□□□□ -0.01
USP10-202ENST00000540269 XIRP1Q702N8 1843 aaKnown RBP15□□□□□ -0.01
USP10-202ENST00000540269 ANKRD13DQ6ZTN6 518 aa15□□□□□ -0.01
USP10-202ENST00000540269 FAM227BQ96M60 508 aa15□□□□□ -0.01
USP10-202ENST00000540269 PKD1L3Q7Z443 1732 aa15□□□□□ -0.01
USP10-202ENST00000540269 MCM2P49736 904 aa15□□□□□ -0.01
USP10-202ENST00000540269 ADCK5Q3MIX3 580 aa15□□□□□ -0.01
USP10-202ENST00000540269 CAVIN1Q6NZI2 390 aaKnown RBP15□□□□□ -0.01
USP10-202ENST00000540269 NCLP19338 710 aaKnown RBP14.99□□□□□ -0.01
USP10-202ENST00000540269 G3BP1Q13283 466 aaKnown RBP eCLIP14.99□□□□□ -0.014e-6■■□□□ 13.9
USP10-202ENST00000540269 TTC5Q8N0Z6 440 aa14.99□□□□□ -0.01
USP10-202ENST00000540269 CABP4P57796 275 aa14.99□□□□□ -0.01
USP10-202ENST00000540269 FOXD4L6Q3SYB3 417 aaPredicted RBP14.99□□□□□ -0.01
USP10-202ENST00000540269 FOXD4L3Q6VB84 417 aaPredicted RBP14.99□□□□□ -0.01
USP10-202ENST00000540269 RUFY3Q7L099 469 aa14.99□□□□□ -0.01
USP10-202ENST00000540269 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
USP10-202ENST00000540269 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
USP10-202ENST00000540269 NBPF26B4DH59 902 aa14.98□□□□□ -0.01
USP10-202ENST00000540269 LARGE1O95461 756 aa14.98□□□□□ -0.01
USP10-202ENST00000540269 PTMSP20962 102 aa14.98□□□□□ -0.01
USP10-202ENST00000540269 RFX5P48382 616 aaPredicted RBP14.98□□□□□ -0.01
USP10-202ENST00000540269 AK2P54819 239 aa14.98□□□□□ -0.01
USP10-202ENST00000540269 NBPF14Q5TI25 921 aa14.98□□□□□ -0.01
USP10-202ENST00000540269 NBPF10Q6P3W6 841 aaKnown RBP14.98□□□□□ -0.01
USP10-202ENST00000540269 ERC1Q8IUD2 1116 aa14.98□□□□□ -0.01
USP10-202ENST00000540269 FAM43AQ8N2R8 423 aa14.98□□□□□ -0.01
USP10-202ENST00000540269 NBPF15Q8N660 670 aa14.98□□□□□ -0.01
USP10-202ENST00000540269 BOLA2Q9H3K6 86 aa14.98□□□□□ -0.01
USP10-202ENST00000540269 CPDO75976 1380 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms